GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002232-TA|BGIBMGA002232-PA|undefined
         (51 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030777-1|AAH30777.1|  822|Homo sapiens ubiquitin specific pept...    27   9.5  
AL163249-3|CAB90432.1|  823|Homo sapiens human ubiquitin process...    27   9.5  
AK222884-1|BAD96604.1|  823|Homo sapiens ubiquitin specific prot...    27   9.5  
AK222681-1|BAD96401.1|  823|Homo sapiens ubiquitin specific prot...    27   9.5  
AF126736-1|AAD20949.1|  823|Homo sapiens ubiquitin processing pr...    27   9.5  

>BC030777-1|AAH30777.1|  822|Homo sapiens ubiquitin specific
           peptidase 16 protein.
          Length = 822

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 10  KNVDPSHLSEGERSETEVSGVGRNRILGMSLRPTE 44
           +N++ ++L+EG   E ++S   +N  L  +L P E
Sbjct: 554 RNLNGAYLTEGSNGEVDISNGFKNLNLNAALHPDE 588


>AL163249-3|CAB90432.1|  823|Homo sapiens human ubiquitin processing
           protease, EC 3.1.2.15 protein.
          Length = 823

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 10  KNVDPSHLSEGERSETEVSGVGRNRILGMSLRPTE 44
           +N++ ++L+EG   E ++S   +N  L  +L P E
Sbjct: 555 RNLNGAYLTEGSNGEVDISNGFKNLNLNAALHPDE 589


>AK222884-1|BAD96604.1|  823|Homo sapiens ubiquitin specific
           protease 16 isoform a variant protein.
          Length = 823

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 10  KNVDPSHLSEGERSETEVSGVGRNRILGMSLRPTE 44
           +N++ ++L+EG   E ++S   +N  L  +L P E
Sbjct: 555 RNLNGAYLTEGSNGEVDISNGFKNLNLNAALHPDE 589


>AK222681-1|BAD96401.1|  823|Homo sapiens ubiquitin specific
           protease 16 isoform a variant protein.
          Length = 823

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 10  KNVDPSHLSEGERSETEVSGVGRNRILGMSLRPTE 44
           +N++ ++L+EG   E ++S   +N  L  +L P E
Sbjct: 555 RNLNGAYLTEGSNGEVDISNGFKNLNLNAALHPDE 589


>AF126736-1|AAD20949.1|  823|Homo sapiens ubiquitin processing
           protease protein.
          Length = 823

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 10  KNVDPSHLSEGERSETEVSGVGRNRILGMSLRPTE 44
           +N++ ++L+EG   E ++S   +N  L  +L P E
Sbjct: 555 RNLNGAYLTEGSNGEVDISNGFKNLNLNAALHPDE 589


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.309    0.129    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,985,124
Number of Sequences: 224733
Number of extensions: 177973
Number of successful extensions: 352
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 5
length of query: 51
length of database: 73,234,838
effective HSP length: 31
effective length of query: 20
effective length of database: 66,268,115
effective search space: 1325362300
effective search space used: 1325362300
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)