GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002232-TA|BGIBMGA002232-PA|undefined
         (51 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3097|AAF49199.1|  530|Drosophila melanogaster CG18136-P...    26   5.5  

>AE014296-3097|AAF49199.1|  530|Drosophila melanogaster CG18136-PA
          protein.
          Length = 530

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 16 HLSEGERSETEVSGVGRNRILGMSLRPT 43
          H  +G RSE +   +  N +LG  LR T
Sbjct: 37 HWKKGHRSECQCFEIATNEVLGRHLRAT 64


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.309    0.129    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,401,480
Number of Sequences: 52641
Number of extensions: 62885
Number of successful extensions: 116
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 1
length of query: 51
length of database: 24,830,863
effective HSP length: 32
effective length of query: 19
effective length of database: 23,146,351
effective search space: 439780669
effective search space used: 439780669
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 53 (25.4 bits)