GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002231-TA|BGIBMGA002231-PA|IPR001810|Cyclin-like F-box
         (472 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   1.9  
EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.           26   2.5  
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           26   2.5  
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        26   2.5  
EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.           25   3.4  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           25   3.4  
EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.           24   7.7  

>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 107 LRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLS 166
           ++Y++L +  I    L ELAA   +L H+ L ++    ++D      F  KL+ L +  +
Sbjct: 153 VQYLDLKLNEIDTVNLAELAASSDSLEHLNLQYNF---IYDIKGQVVF-AKLKTLDLSSN 208

Query: 167 EVIFM 171
           ++ FM
Sbjct: 209 KLAFM 213


>EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 107 LRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLS 166
           ++Y++L +  I    L ELAA    L H+ L ++    ++D      F  KL+ L +  +
Sbjct: 168 VQYLDLKLNEIDTVNLAELAASSDTLEHLNLQYNF---IYDIKGQVVF-AKLKTLDLSSN 223

Query: 167 EVIFM 171
           ++ FM
Sbjct: 224 KLAFM 228


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 107 LRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLS 166
           ++Y++L +  I    L ELAA    L H+ L ++    ++D      F  KL+ L +  +
Sbjct: 168 VQYLDLKLNEIDTVNLAELAASSDTLEHLNLQYNF---IYDIQGQVVF-AKLKTLDLSSN 223

Query: 167 EVIFM 171
           ++ FM
Sbjct: 224 KLAFM 228


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 107 LRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLS 166
           ++Y++L +  I    L ELAA    L H+ L ++    ++D      F  KL+ L +  +
Sbjct: 93  VQYLDLKLNEIDTVNLAELAASSDTLEHLNLQYNF---MYDIQGQVVF-AKLKTLDLSSN 148

Query: 167 EVIFM 171
           ++ FM
Sbjct: 149 KLAFM 153


>EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 107 LRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLS 166
           ++Y++L +  I    L ELAA    L H+ L ++    ++D      F  KL+ L +  +
Sbjct: 168 VQYLDLKLNEIDTVNLAELAASSDTLEHLNLQYNF---IYDVKGQVVF-AKLKTLDLSSN 223

Query: 167 EVIFM 171
           ++ FM
Sbjct: 224 KLAFM 228


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 107 LRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLS 166
           ++Y++L +  I    L ELAA    L H+ L ++    ++D      F  KL+ L +  +
Sbjct: 168 VQYLDLKLNEIDTVNLAELAASSDTLEHLNLQYNF---IYDVKGQVVF-AKLKTLDLSSN 223

Query: 167 EVIFM 171
           ++ FM
Sbjct: 224 KLAFM 228


>EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 7.7
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 107 LRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLS 166
           ++Y++L +  I      ELAA    L H+ L ++    ++D      F  KL+ L +  +
Sbjct: 168 VQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF---IYDIKGQVVF-AKLKTLDLSSN 223

Query: 167 EVIFM 171
           ++ FM
Sbjct: 224 KLAFM 228


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,251
Number of Sequences: 2123
Number of extensions: 16539
Number of successful extensions: 82
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 82
Number of HSP's gapped (non-prelim): 7
length of query: 472
length of database: 516,269
effective HSP length: 66
effective length of query: 406
effective length of database: 376,151
effective search space: 152717306
effective search space used: 152717306
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)