GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002230-TA|BGIBMGA002230-PA|IPR007087|Zinc finger,
C2H2-type, IPR006594|Lissencephaly type-1-like homology motif,
IPR006595|CTLH, C-terminal to LisH motif, IPR013144|CT11-RanBPM
         (409 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    28   0.40 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   0.40 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    28   0.40 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   1.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.6  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    25   4.9  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 28.3 bits (60), Expect = 0.40
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 317 YKESSQAADCPACQAPLSGLARQLPHAHCSHSRLVCRISRLPLNEHNQPM 366
           +K SS A   P    PLSG+ ++LP     HS     +  +P+N +   M
Sbjct: 398 FKVSSPAPVHPLAGHPLSGIKQELPELPVRHSLSSELMQPIPINMNADDM 447


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 0.40
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 317 YKESSQAADCPACQAPLSGLARQLPHAHCSHSRLVCRISRLPLNEHNQPM 366
           +K SS A   P    PLSG+ ++LP     HS     +  +P+N +   M
Sbjct: 398 FKVSSPAPVHPLAGHPLSGIKQELPELPVRHSLSSELMQPIPINMNADDM 447


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 0.40
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 317 YKESSQAADCPACQAPLSGLARQLPHAHCSHSRLVCRISRLPLNEHNQPM 366
           +K SS A   P    PLSG+ ++LP     HS     +  +P+N +   M
Sbjct: 358 FKVSSPAPVHPLAGHPLSGIKQELPELPVRHSLSSELMQPIPINMNADDM 407


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 20/90 (22%), Positives = 35/90 (38%)

Query: 23  HAQVPYEVFNKKYRSAQRVFDVEARQVSSAATEMETVKNQPITNTEIDSLLGGMVEKLTT 82
           H  + YE+ N K R AQ  F     ++     ++ET++   +   E  +     V+ L  
Sbjct: 717 HDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQA 776

Query: 83  MKRKASEAINEELQVAYVCKKRLEHLKEQA 112
                      EL+ A    KR +   E++
Sbjct: 777 KIADGKGHRERELKSAEEDLKRSKKKSEES 806


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 1.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 317 YKESSQAADCPACQAPLSGLARQLPHAHCSHS 348
           +K SS A   P    PLSG+ ++LP     HS
Sbjct: 350 FKVSSPAPVHPLAGHPLSGIKQELPELPVRHS 381


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 9   HATLKFLNTVYNYDHAQVPYEVFNKKYRSAQRVFDVEARQVSSAATEMETVKNQPITNTE 68
           +A L +L   Y  D +  P +V  +     +  FD    Q ++    +  ++N PIT+  
Sbjct: 65  YAILIYLAEKYALDDSLYPKDVCERSIVHQRLFFDSGMFQNTTLQAVLSHLRNNPITDEH 124

Query: 69  IDSLLGGM 76
           +  +  G+
Sbjct: 125 LAKVKRGV 132


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.130    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,891
Number of Sequences: 2123
Number of extensions: 14040
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 10
length of query: 409
length of database: 516,269
effective HSP length: 66
effective length of query: 343
effective length of database: 376,151
effective search space: 129019793
effective search space used: 129019793
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)