GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002229-TA|BGIBMGA002229-PA|undefined
         (92 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   0.92 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   0.92 
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   2.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   2.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   2.8  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 0.92
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 69  LLSKGIENMTDLRLELTDDSKEK 91
           L++K +ENMT +  +LT+  ++K
Sbjct: 97  LVAKTLENMTKIDKDLTELGQKK 119


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 0.92
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 69  LLSKGIENMTDLRLELTDDSKEK 91
           L++K +ENMT +  +LT+  ++K
Sbjct: 97  LVAKTLENMTKIDKDLTELGQKK 119


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query: 31  KIRILEVTLQRGERQYEQR 49
           K+ + E  + RGER++  +
Sbjct: 90  KVEVHEALMSRGERRFSHK 108


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query: 31  KIRILEVTLQRGERQYEQR 49
           K+ + E  + RGER++  +
Sbjct: 250 KVEVHEALMSRGERRFSHK 268


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query: 31  KIRILEVTLQRGERQYEQR 49
           K+ + E  + RGER++  +
Sbjct: 250 KVEVHEALMSRGERRFSHK 268


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.135    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,010
Number of Sequences: 317
Number of extensions: 305
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 92
length of database: 114,650
effective HSP length: 47
effective length of query: 45
effective length of database: 99,751
effective search space:  4488795
effective search space used:  4488795
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.6 bits)
S2: 37 (19.0 bits)