GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002228-TA|BGIBMGA002228-PA|undefined
         (64 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86B20 Cluster: Similar to probable eukaryotic translat...    38   0.039
UniRef50_A0DKQ4 Cluster: Chromosome undetermined scaffold_54, wh...    32   2.5  
UniRef50_Q52GY4 Cluster: Putative uncharacterized protein; n=3; ...    31   3.4  
UniRef50_A3J7I4 Cluster: N-terminal Zn-ribbon domain fused to SA...    31   4.4  
UniRef50_Q93515 Cluster: Putative uncharacterized protein; n=2; ...    31   4.4  
UniRef50_Q8I5W3 Cluster: Putative uncharacterized protein; n=1; ...    31   4.4  
UniRef50_Q8IJU7 Cluster: Putative uncharacterized protein; n=1; ...    30   7.8  
UniRef50_Q7RBU8 Cluster: Putative uncharacterized protein PY0603...    30   7.8  
UniRef50_Q54RP8 Cluster: SNF2-related domain-containing protein;...    30   7.8  

>UniRef50_Q86B20 Cluster: Similar to probable eukaryotic translation
           initiation factor 3 110 kd subunit; n=2; Dictyostelium
           discoideum|Rep: Similar to probable eukaryotic
           translation initiation factor 3 110 kd subunit -
           Dictyostelium discoideum (Slime mold)
          Length = 1030

 Score = 37.9 bits (84), Expect = 0.039
 Identities = 19/48 (39%), Positives = 31/48 (64%)

Query: 14  EDYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKLVVKVCNAERRKKK 61
           + ++ A++E+RK  LP L+KE+EKR   FLI  +  V+   A+R K +
Sbjct: 690 QKFTQAVIEERKKQLPALQKEQEKRFQEFLIQQEQDVQERKAKREKAR 737


>UniRef50_A0DKQ4 Cluster: Chromosome undetermined scaffold_54, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_54,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 678

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 5   KSFKDIYVSEDYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKLV--VKVCNAERRK 59
           ++FKD  +SE  SN ++E+ K  L ++K+ ++K     L Y++ +  +++ N E++K
Sbjct: 97  QNFKDSRISEQQSN-VIEREKKELEKMKQRQQKEIDQMLEYERRMQEIRLRNEEKQK 152


>UniRef50_Q52GY4 Cluster: Putative uncharacterized protein; n=3;
          Caenorhabditis|Rep: Putative uncharacterized protein -
          Caenorhabditis elegans
          Length = 218

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)

Query: 10 IYVSEDYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKLVVKVCNAE 56
          ++  ++ SN++LEK  A   +L+   E+RN A    D+ VV+VC+ E
Sbjct: 1  MFFFQNASNSILEKNNANKNKLRTSSEERNYA----DRSVVRVCHRE 43


>UniRef50_A3J7I4 Cluster: N-terminal Zn-ribbon domain fused to
           SAM-dependent methyltransferase; n=1; Flavobacteria
           bacterium BAL38|Rep: N-terminal Zn-ribbon domain fused
           to SAM-dependent methyltransferase - Flavobacteria
           bacterium BAL38
          Length = 211

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 2   KNRKSFKDIYVSEDYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKLVV 50
           KN+K F+D Y  +D+++  +  ++A L  ++K    + +  L+YDKL+V
Sbjct: 162 KNQKPFEDWYYKDDFTHVFI-YQEATLHWIQKNLPFQKV--LVYDKLIV 207


>UniRef50_Q93515 Cluster: Putative uncharacterized protein; n=2;
            Caenorhabditis elegans|Rep: Putative uncharacterized
            protein - Caenorhabditis elegans
          Length = 2268

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 5    KSFKDIYVSEDYSNAMLEKRKALLPRLKKEREKRNIAFLIYD 46
            K FK+I  SE       + +K++LP+L+K  E  ++  L+ D
Sbjct: 1613 KEFKEIVHSEIIDPKTKKPKKSMLPKLEKTTESESLTILLMD 1654


>UniRef50_Q8I5W3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1753

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 5/47 (10%)

Query: 2   KNRKSFKDIYVSEDYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKL 48
           K +KSFK+ Y+   +   +L+K  +++  LKK+ E++N   +IYD +
Sbjct: 726 KKKKSFKNDYI---FGKNLLDKLTSIM--LKKDNEEQNYENIIYDDI 767


>UniRef50_Q8IJU7 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1345

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query: 15   DYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKLVVKVCNAERRKKK 61
            DY N ++ K   +L + KK ++KR+    +Y + + K+ N   +K K
Sbjct: 1166 DYKNNIIIKGSNILNKQKKNKKKRSSIITVYYRYLYKLYNVLIKKTK 1212


>UniRef50_Q7RBU8 Cluster: Putative uncharacterized protein PY06038;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY06038 - Plasmodium yoelii yoelii
          Length = 1154

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 1   MKNRKSFKDIYVSEDYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKLVVKVCNAERRKK 60
           +KNR S    +   D  +A +E  K LL   K E+EK     L YD+L  K    E++KK
Sbjct: 591 LKNRNSDLQSF-QNDQEDANIEYLKKLL---KNEKEKNFKLELEYDELKQKYSILEKKKK 646

Query: 61  K 61
           K
Sbjct: 647 K 647


>UniRef50_Q54RP8 Cluster: SNF2-related domain-containing protein;
           n=2; Dictyostelium discoideum AX4|Rep: SNF2-related
           domain-containing protein - Dictyostelium discoideum AX4
          Length = 931

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 15/57 (26%), Positives = 29/57 (50%)

Query: 8   KDIYVSEDYSNAMLEKRKALLPRLKKEREKRNIAFLIYDKLVVKVCNAERRKKKPTI 64
           K++Y  ED++ A+  K   ++  + +E  K    FL  D ++ K    ++ KK P +
Sbjct: 166 KEVYFQEDFAMAIGNKWIKIILSVGEEEFKNGSIFLKTDSIIKKKKEEKKEKKAPIL 222


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.319    0.134    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,058,556
Number of Sequences: 1657284
Number of extensions: 1988928
Number of successful extensions: 7544
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7539
Number of HSP's gapped (non-prelim): 10
length of query: 64
length of database: 575,637,011
effective HSP length: 44
effective length of query: 20
effective length of database: 502,716,515
effective search space: 10054330300
effective search space used: 10054330300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)