GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002228-TA|BGIBMGA002228-PA|undefined
         (64 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051608-1|AAK93032.1|  511|Drosophila melanogaster GH25251p pro...    27   4.3  
AE014134-1299|AAF52531.1|  511|Drosophila melanogaster CG6730-PA...    27   4.3  
BT003247-1|AAO25004.1|  194|Drosophila melanogaster LD34406p pro...    25   9.9  
AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-P...    25   9.9  
AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-P...    25   9.9  
AE014297-1289|AAF54630.1|  194|Drosophila melanogaster CG6719-PA...    25   9.9  

>AY051608-1|AAK93032.1|  511|Drosophila melanogaster GH25251p
           protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 9/31 (29%), Positives = 22/31 (70%)

Query: 4   RKSFKDIYVSEDYSNAMLEKRKALLPRLKKE 34
           R+  KDI + +D+++ ++ +R+A+L R + +
Sbjct: 236 RRLQKDIAIMQDFTDKVIRERRAILERARAD 266


>AE014134-1299|AAF52531.1|  511|Drosophila melanogaster CG6730-PA
           protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 9/31 (29%), Positives = 22/31 (70%)

Query: 4   RKSFKDIYVSEDYSNAMLEKRKALLPRLKKE 34
           R+  KDI + +D+++ ++ +R+A+L R + +
Sbjct: 236 RRLQKDIAIMQDFTDKVIRERRAILERARAD 266


>BT003247-1|AAO25004.1|  194|Drosophila melanogaster LD34406p
           protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 21  LEKRKALLPRLKKEREKRNIAFLIYDKLVVK 51
           LE+   ++  L+KE E+R   FL+ D++ +K
Sbjct: 79  LERSLEMVNVLRKEDEERETQFLLSDQVFIK 109


>AE014297-2195|AAF55305.1|   60|Drosophila melanogaster
          CG17931-PA, isoform A protein.
          Length = 60

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 2  KNRKSFKDIYVSEDYSNAMLEKRKALLPRLKKEREKR 38
          KN+K   D+   +   N  +E+RKA    L +E++K+
Sbjct: 13 KNQKKQADLTKGKRTDNLTVEQRKARDAELMREKQKK 49


>AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-PB,
           isoform B protein.
          Length = 118

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 2   KNRKSFKDIYVSEDYSNAMLEKRKALLPRLKKEREKR 38
           KN+K   D+   +   N  +E+RKA    L +E++K+
Sbjct: 71  KNQKKQADLTKGKRTDNLTVEQRKARDAELMREKQKK 107


>AE014297-1289|AAF54630.1|  194|Drosophila melanogaster CG6719-PA
           protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 21  LEKRKALLPRLKKEREKRNIAFLIYDKLVVK 51
           LE+   ++  L+KE E+R   FL+ D++ +K
Sbjct: 79  LERSLEMVNVLRKEDEERETQFLLSDQVFIK 109


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.134    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,906,358
Number of Sequences: 52641
Number of extensions: 90545
Number of successful extensions: 285
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 279
Number of HSP's gapped (non-prelim): 6
length of query: 64
length of database: 24,830,863
effective HSP length: 44
effective length of query: 20
effective length of database: 22,514,659
effective search space: 450293180
effective search space used: 450293180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)