GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002227-TA|BGIBMGA002227-PA|IPR004117|Olfactory receptor,
Drosophila
         (162 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    25   0.88 
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          22   8.2  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    22   8.2  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.88
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 66  LQDAVYCVPWEYMDTSHRKMVYMMFRQSQ 94
           L+ A+Y   W     + R  + MM RQSQ
Sbjct: 328 LEHALYATRWYNYPIAFRSSIRMMLRQSQ 356


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 125 HLVMKMHREVLVQHGTGRMSTTRL 148
           H + K+ +E   QH   R+S+ R+
Sbjct: 325 HAISKVMKECWYQHPAARLSSLRI 348


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 13/79 (16%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 39  GFLTLVLNQQLIQISVIFELLGYMSDKLQDAVYCVPWEYMD--TSHRKMVYMMFRQSQIP 96
           GF  LV+  Q+     +   + Y +DK  + V    +   D  TS   + ++      + 
Sbjct: 322 GFYLLVMTSQVFIFCYVGNEISYTTDKFTEFVGFSNYFKFDKRTSQAMIFFLQMTLKDVH 381

Query: 97  LQLKAMNMLSIGVKTMVSV 115
           +++ ++  +++ + T + +
Sbjct: 382 IKVGSVLKVTLNLHTFLQI 400


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.136    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,835
Number of Sequences: 2123
Number of extensions: 3125
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 162
length of database: 516,269
effective HSP length: 59
effective length of query: 103
effective length of database: 391,012
effective search space: 40274236
effective search space used: 40274236
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 45 (22.2 bits)