GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002225-TA|BGIBMGA002225-PA|IPR005336|Protein of unknown
function UPF0041
         (115 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   6.4  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    20   6.4  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    20   6.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   6.4  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase
          protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 53 KMTFALSLYSLMFMRFAWKVQPRNL 77
          K      L +L  +  AWK  P NL
Sbjct: 2  KAVIVFCLMALSIVDAAWKPLPENL 26


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
          protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 5  ARKLVNQLKSKEFRDY 20
          A K+VN LK+K  +D+
Sbjct: 83 ANKVVNYLKTKRPKDW 98


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
          protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 5  ARKLVNQLKSKEFRDY 20
          A K+VN LK+K  +D+
Sbjct: 83 ANKVVNYLKTKRPKDW 98


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
          protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 53 KMTFALSLYSLMFMRFAWKVQPRNL 77
          K      L +L  +  AWK  P NL
Sbjct: 2  KAVIVFCLMALSIVDAAWKPLPENL 26


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.135    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,221
Number of Sequences: 429
Number of extensions: 1160
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 115
length of database: 140,377
effective HSP length: 50
effective length of query: 65
effective length of database: 118,927
effective search space:  7730255
effective search space used:  7730255
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.2 bits)
S2: 39 (19.8 bits)