GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002224-TA|BGIBMGA002224-PA|undefined
         (407 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2859|AAN13829.1|  819|Drosophila melanogaster CG31195-P...   543   e-154
AE013599-3611|AAF47012.1|  176|Drosophila melanogaster CG18679-P...    69   2e-11
AY118394-1|AAM48423.1|  875|Drosophila melanogaster RE52162p pro...    31   2.9  
AE014134-2171|AAF53174.2| 1075|Drosophila melanogaster CG31760-P...    31   2.9  

>AE014297-2859|AAN13829.1|  819|Drosophila melanogaster CG31195-PA
           protein.
          Length = 819

 Score =  543 bits (1341), Expect = e-154
 Identities = 246/386 (63%), Positives = 296/386 (76%), Gaps = 12/386 (3%)

Query: 9   IQGLPSELEKAPAFLRAVYRDRYHEYVQAATGPAALHAPRPNVYEMLNFIRGVRPDNCSR 68
           IQ LP + +KA   +R  Y DR+ EY    TG  +LHA   N+ + L +I GV    C  
Sbjct: 405 IQKLPIQWDKASYHIRQKYLDRHPEYRNYTTGSRSLHAEHLNIDQALKYIHGVNYRTCKN 464

Query: 69  YNPSDLVLNGDLAFGVEKQLENQAKMALRLANFISAFLQ------------VSDPQEVFS 116
           ++P DL+L GD++FG ++Q EN+AKMA+RLANFISAFLQ            VSDP EV+S
Sbjct: 465 FHPQDLILRGDVSFGAKEQFENEAKMAVRLANFISAFLQSMQTITRISSLQVSDPNEVYS 524

Query: 117 GNRVADKPLTEDQMIGETLAIVLGDSKIWSAGTYWDREKFPNRTYFAPFAYKTELNVRKF 176
           G RVADKPLTEDQMIGETLAIVLGDSK+WSA   W+R KF NRTYFAP+AYKTELN RKF
Sbjct: 525 GKRVADKPLTEDQMIGETLAIVLGDSKVWSATMLWERNKFTNRTYFAPYAYKTELNTRKF 584

Query: 177 RLEDLARLNSTEEVYTNKPWFQFLKQRWSSNFDSLEQYFLKMNIRDSEAGKYLKHYERFP 236
           ++EDLARLN T E+YT K +F+FLKQRW++NFD LE +++K+ IR +E G+Y + YE +P
Sbjct: 585 KVEDLARLNKTHELYTEKKYFKFLKQRWNTNFDDLETFYMKIKIRHNETGEYQQKYEHYP 644

Query: 237 HWYRAAALRHGHWTQPYYDCGGRVPQWAVTYAAPFFGWDSVKVKLEFKGAVAVTMSLLSL 296
           + YRAA ++HG+WTQP +DC G V +W VTYA PFFGWDS+KVKLEFKG VAV+M +L L
Sbjct: 645 NSYRAANIKHGYWTQPQFDCDGYVKKWLVTYAVPFFGWDSLKVKLEFKGVVAVSMDMLQL 704

Query: 297 DINQCPDKYYVSNAFKGTDKCDRSSSYCVPILGRGYEAGGYKCECLQAFEYPFEDPTTYY 356
           DINQCPD YY  NAFK T KCD  SSYCVPI+GRGYE GGYKCECLQ +EYPFED  TYY
Sbjct: 705 DINQCPDWYYEPNAFKNTHKCDEQSSYCVPIMGRGYETGGYKCECLQGYEYPFEDLITYY 764

Query: 357 DGQIVEAEFQNIILDKETRIDMFKCR 382
           DGQ+VEAE+QNI+ D ETR DMFKCR
Sbjct: 765 DGQLVEAEYQNIVADVETRYDMFKCR 790



 Score = 62.9 bits (146), Expect = 8e-10
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 10/122 (8%)

Query: 249 WTQPYYDCGGRVPQWAVTYAAPF---FGWDSVKVKLEFKGAVAVT---MSLLSLDINQCP 302
           +T+PY+DCG R  +W V    P    +   +    +E+    AV+   M    +DINQCP
Sbjct: 267 FTRPYFDCG-RSNKWLVAAVVPIADIYPRHTQFRHIEYPKYTAVSVLEMDFERIDINQCP 325

Query: 303 --DKYYVSNAFKGTDKCDRSSSYCVPILGRGYEAGGYKCECLQAFEYPFEDPTTYYDGQI 360
             +     N F  T +C + ++ C P+ G G+  GGY+C C   F  P      Y  G+I
Sbjct: 326 LGEGNKGPNHFADTARCKKETTECEPLQGWGFRRGGYQCRCKPGFRLPNVVRRPYL-GEI 384

Query: 361 VE 362
           VE
Sbjct: 385 VE 386


>AE013599-3611|AAF47012.1|  176|Drosophila melanogaster CG18679-PA
           protein.
          Length = 176

 Score = 68.5 bits (160), Expect = 2e-11
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 284 KGAVAVTMSLLSLDINQCPDKYYVS-----NAFKGTDKCDRSSSYCVPILGRGYEAGGYK 338
           +G   + + L  +DI+QCP ++        N F GTDKC + ++ C  I+G G+  G YK
Sbjct: 9   RGTSGIDIDLRRVDIDQCPQRHTPGTKRPLNIFAGTDKCKQRTTMCEAIMGLGFRRGSYK 68

Query: 339 CECLQAFEYP-FEDPTTYYDGQIVEAEFQNIILDKET 374
           C C + F +P       +++G ++E E++ ++L K +
Sbjct: 69  CLCRKGFYFPDIVSQHKFFNGSLLEEEYEKLMLGKNS 105


>AY118394-1|AAM48423.1|  875|Drosophila melanogaster RE52162p
           protein.
          Length = 875

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 247 GHWTQPYYDCGGRVPQWAVTY--AAPFFGWDSVKVKLEFKGAVAVTMSLLSLDINQCPDK 304
           G WT PY+ C     +W V+Y  A P  G      +   +G +++ + + +L +NQC  +
Sbjct: 302 GWWTYPYFSCS--QSRWLVSYSIAIPPIG------RHGLRGFISIDIDVSTLRVNQCEAE 353

Query: 305 YY 306
            Y
Sbjct: 354 PY 355


>AE014134-2171|AAF53174.2| 1075|Drosophila melanogaster CG31760-PA
           protein.
          Length = 1075

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 247 GHWTQPYYDCGGRVPQWAVTY--AAPFFGWDSVKVKLEFKGAVAVTMSLLSLDINQCPDK 304
           G WT PY+ C     +W V+Y  A P  G      +   +G +++ + + +L +NQC  +
Sbjct: 302 GWWTYPYFSCS--QSRWLVSYSIAIPPIG------RHGLRGFISIDIDVSTLRVNQCEAE 353

Query: 305 YY 306
            Y
Sbjct: 354 PY 355


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.137    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,836,591
Number of Sequences: 52641
Number of extensions: 869754
Number of successful extensions: 1631
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1624
Number of HSP's gapped (non-prelim): 5
length of query: 407
length of database: 24,830,863
effective HSP length: 87
effective length of query: 320
effective length of database: 20,251,096
effective search space: 6480350720
effective search space used: 6480350720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)