GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002223-TA|BGIBMGA002223-PA|undefined
         (350 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M61733-1|AAA35797.1|  641|Homo sapiens erythroid membrane protei...    31   4.6  
BC039079-1|AAH39079.1|  720|Homo sapiens EPB41 protein protein.        31   4.6  
AL357500-5|CAH71638.1|  641|Homo sapiens erythrocyte membrane pr...    31   4.6  
AL138785-5|CAI21970.1|  641|Homo sapiens erythrocyte membrane pr...    31   4.6  
AL138785-4|CAI21968.1|  720|Homo sapiens erythrocyte membrane pr...    31   4.6  

>M61733-1|AAA35797.1|  641|Homo sapiens erythroid membrane protein
           4.1 protein.
          Length = 641

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 33  DEVRGKMDKINSENCYISH----LDDLYLSEDSV-SHHPDVKEININ 74
           D+ + K ++++ EN YI H    L+DL  S++ +  HH  + E+  N
Sbjct: 422 DQTQKKRERLDGENIYIRHSNLMLEDLDKSQEEIKKHHASISELKKN 468


>BC039079-1|AAH39079.1|  720|Homo sapiens EPB41 protein protein.
          Length = 720

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 33  DEVRGKMDKINSENCYISH----LDDLYLSEDSV-SHHPDVKEININ 74
           D+ + K ++++ EN YI H    L+DL  S++ +  HH  + E+  N
Sbjct: 631 DQTQKKRERLDGENIYIRHSNLMLEDLDKSQEEIKKHHASISELKKN 677


>AL357500-5|CAH71638.1|  641|Homo sapiens erythrocyte membrane
           protein band 4.1 (elliptocytosis 1, RH-linked) protein.
          Length = 641

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 33  DEVRGKMDKINSENCYISH----LDDLYLSEDSV-SHHPDVKEININ 74
           D+ + K ++++ EN YI H    L+DL  S++ +  HH  + E+  N
Sbjct: 422 DQTQKKRERLDGENIYIRHSNLMLEDLDKSQEEIKKHHASISELKKN 468


>AL138785-5|CAI21970.1|  641|Homo sapiens erythrocyte membrane
           protein band 4.1 (elliptocytosis 1, RH-linked) protein.
          Length = 641

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 33  DEVRGKMDKINSENCYISH----LDDLYLSEDSV-SHHPDVKEININ 74
           D+ + K ++++ EN YI H    L+DL  S++ +  HH  + E+  N
Sbjct: 422 DQTQKKRERLDGENIYIRHSNLMLEDLDKSQEEIKKHHASISELKKN 468


>AL138785-4|CAI21968.1|  720|Homo sapiens erythrocyte membrane
           protein band 4.1 (elliptocytosis 1, RH-linked) protein.
          Length = 720

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 33  DEVRGKMDKINSENCYISH----LDDLYLSEDSV-SHHPDVKEININ 74
           D+ + K ++++ EN YI H    L+DL  S++ +  HH  + E+  N
Sbjct: 631 DQTQKKRERLDGENIYIRHSNLMLEDLDKSQEEIKKHHASISELKKN 677


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.135    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,060,434
Number of Sequences: 224733
Number of extensions: 2526131
Number of successful extensions: 4547
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4542
Number of HSP's gapped (non-prelim): 10
length of query: 350
length of database: 73,234,838
effective HSP length: 91
effective length of query: 259
effective length of database: 52,784,135
effective search space: 13671090965
effective search space used: 13671090965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 66 (30.7 bits)