Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002223-TA|BGIBMGA002223-PA|undefined
(350 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.42
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.42
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.74
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 25 0.74
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 24 2.3
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 24 2.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 5.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 5.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 5.2
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 5.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 6.9
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 9.1
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 9.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.2 bits (55), Expect = 0.42
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 219 WLPDRVERRHDTKTTYQVEIRYANNTNETFTFHGPPGNDETPGP---VNWTRPY 269
W P E RH + V R +++N ++ F G+ E G + RPY
Sbjct: 1027 WSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTGLRPY 1080
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.2 bits (55), Expect = 0.42
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 219 WLPDRVERRHDTKTTYQVEIRYANNTNETFTFHGPPGNDETPGP---VNWTRPY 269
W P E RH + V R +++N ++ F G+ E G + RPY
Sbjct: 1023 WSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTGLRPY 1076
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.4 bits (53), Expect = 0.74
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 178 HLQKISTMNTFIIEDLGAFEPDSLSKDYTSEFYRTNEWY 216
HL+ T+N ++ L PD S Y EF +WY
Sbjct: 132 HLRGTLTVNVSVLL-LSLASPDESSLKYEVEFLLQQQWY 169
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 49 ISHLDDLYLSEDSVSHHPDVKEININPVFPNRTAMLHLHNMAMN 92
I H DD++L + H D K+ P+ P A+ N +N
Sbjct: 187 IHHYDDIWLPDTYFIMHGDFKD----PLIPVHFALRIYRNGTVN 226
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 25.4 bits (53), Expect = 0.74
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 221 PDRVERRHDTKTTYQVEIRYANNTNETFTFHGPPGNDE 258
P R + +HD + I YA N T G P N E
Sbjct: 174 PQRTDGKHDYRVWNHQLISYAGYKNPDGTIIGDPANIE 211
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 319 INQCPPSPGNDRPNKFASTARC 340
+ +C P+ G+D NK + A+C
Sbjct: 111 MGKCLPTSGSDNCNKIYNLAKC 132
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 319 INQCPPSPGNDRPNKFASTARC 340
+ +C P+ G+D NK + A+C
Sbjct: 111 MGKCLPTSGSDNCNKIYNLAKC 132
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 5.2
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 179 LQKISTMNTFIIEDLGAFEPDSLSKDYTSEFYRTNEWY 216
+Q T+N ++ L PD S Y EF +WY
Sbjct: 82 VQGTLTVNVSVLL-LSLASPDESSLKYEVEFLLQQQWY 118
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 49 ISHLDDLYLSEDSVSHHPDVKEININPVFPNRTAMLHLHNMAMN 92
I H DD++L + H D K+ P+ P A+ N +N
Sbjct: 136 IHHYDDIWLPDTYFIMHGDFKD----PLIPVHFALRIYRNGTVN 175
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 5.2
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 179 LQKISTMNTFIIEDLGAFEPDSLSKDYTSEFYRTNEWY 216
+Q T+N ++ L PD S Y EF +WY
Sbjct: 82 VQGTLTVNVSVLL-LSLASPDESSLKYEVEFLLQQQWY 118
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 49 ISHLDDLYLSEDSVSHHPDVKEININPVFPNRTAMLHLHNMAMN 92
I H DD++L + H D K+ P+ P A+ N +N
Sbjct: 136 IHHYDDIWLPDTYFIMHGDFKD----PLIPVHFALRIYRNGTVN 175
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 5.2
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 179 LQKISTMNTFIIEDLGAFEPDSLSKDYTSEFYRTNEWY 216
+Q T+N ++ L PD S Y EF +WY
Sbjct: 82 VQGTLTVNVSVLL-LSLASPDESSLKYEVEFLLQQQWY 118
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 49 ISHLDDLYLSEDSVSHHPDVKEININPVFPNRTAMLHLHNMAMN 92
I H DD++L + H D K+ P+ P A+ N +N
Sbjct: 136 IHHYDDIWLPDTYFIMHGDFKD----PLIPVHFALRIYRNGTVN 175
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.6 bits (46), Expect = 5.2
Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 55 LYLSEDSVSHHPDVKEININP---VFPNR 80
+Y ++ H PD K++ + P VFP++
Sbjct: 126 IYALSVAILHRPDTKDLPVPPLTEVFPDK 154
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 6.9
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 55 LYLSEDSVSHHPDVKEININPVFPNRTAMLHLHNMAMNRAF 95
LY +V H PD K + + P++ L+ ++ M +A+
Sbjct: 139 LYALSVAVIHRPDTKLMKLPPMY-EVMPHLYFNDEVMQKAY 178
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 215 WYKVWLPDRVERRHDTKT 232
WYK W +R + D KT
Sbjct: 210 WYKGWKVERKDGNADGKT 227
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 9.1
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 219 WLPDRVERRHDTKTTYQVEIRYANNTNETF 248
W+P ++ +H T+ ++ N N+ F
Sbjct: 116 WVPHELKEKHLTQRINSCDLLKKRNENDPF 145
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.135 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,515
Number of Sequences: 429
Number of extensions: 5860
Number of successful extensions: 29
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 17
length of query: 350
length of database: 140,377
effective HSP length: 58
effective length of query: 292
effective length of database: 115,495
effective search space: 33724540
effective search space used: 33724540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)
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