GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002221-TA|BGIBMGA002221-PA|undefined
         (90 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    19   8.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    19   8.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    19   8.2  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 8.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 12  QKDPPTRKHSDEF 24
           Q DP TRK  D F
Sbjct: 325 QVDPATRKEIDIF 337


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 8.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 12  QKDPPTRKHSDEF 24
           Q DP TRK  D F
Sbjct: 325 QVDPATRKEIDIF 337


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 8.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 12  QKDPPTRKHSDEF 24
           Q DP TRK  D F
Sbjct: 325 QVDPATRKEIDIF 337


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,989
Number of Sequences: 317
Number of extensions: 379
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 90
length of database: 114,650
effective HSP length: 47
effective length of query: 43
effective length of database: 99,751
effective search space:  4289293
effective search space used:  4289293
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)
S2: 37 (19.0 bits)