GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002221-TA|BGIBMGA002221-PA|undefined
         (90 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-P...    26   7.4  
AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    26   7.4  

>AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-PA
           protein.
          Length = 1736

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 5   TDRGLARQKDPPTRKHSDEFNFEGLSE 31
           +D  LA+Q   P R+HS E   E L +
Sbjct: 99  SDNALAKQNASPHRRHSKEHLLEALQQ 125


>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
            protein.
          Length = 1667

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 3    SVTDRGLARQKDPPTRKHSDEFNFEGLSEEELQHYIKML 41
            S T R +++ +  P        NFEG+ +   + Y++ L
Sbjct: 1624 SPTGRNVSKSQSTPQAAGPSNINFEGIPKSLSEQYVRQL 1662


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,954,019
Number of Sequences: 52641
Number of extensions: 94268
Number of successful extensions: 323
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 321
Number of HSP's gapped (non-prelim): 2
length of query: 90
length of database: 24,830,863
effective HSP length: 69
effective length of query: 21
effective length of database: 21,198,634
effective search space: 445171314
effective search space used: 445171314
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)