GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002221-TA|BGIBMGA002221-PA|undefined
         (90 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   4.2  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    20   4.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   9.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   9.6  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding
          protein ASP6 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 10 ARQKDPPTRKHSDEFNFEGLSEEELQHYIKMLLV 43
          +++ D P      +F  E   +E L  Y+K +++
Sbjct: 44 SKKNDTPKELLDGQFRGEFPQDERLMCYMKCIMI 77


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding
          protein protein.
          Length = 120

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 10 ARQKDPPTRKHSDEFNFEGLSEEELQHYIKMLLV 43
          +++ D P      +F  E   +E L  Y+K +++
Sbjct: 18 SKKNDTPKELLDGQFRGEFPQDERLMCYMKCIMI 51


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 12  QKDPPTRKHSDE 23
           +KD PT+  SDE
Sbjct: 457 KKDGPTKSWSDE 468


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 66  DRPERLDRRDRSAK 79
           DR +R+D  DR+ K
Sbjct: 448 DRVDRMDTMDRTDK 461



 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 66  DRPERLDRRDRSAK 79
           DR +R+D  DR+ K
Sbjct: 496 DRMDRMDTMDRTDK 509


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,803
Number of Sequences: 429
Number of extensions: 586
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 90
length of database: 140,377
effective HSP length: 48
effective length of query: 42
effective length of database: 119,785
effective search space:  5030970
effective search space used:  5030970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)
S2: 37 (19.0 bits)