GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002219-TA|BGIBMGA002219-PA|IPR007233|Sybindin-like
protein, IPR011012|Longin-like
         (145 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5271| Best HMM Match : No HMM Matches (HMM E-Value=.)               63   1e-10
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.49 
SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.1  
SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003)          29   2.0  
SB_38609| Best HMM Match : NAD_binding_5 (HMM E-Value=0)               29   2.0  
SB_19200| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_46934| Best HMM Match : MORN (HMM E-Value=0)                        27   4.6  
SB_57311| Best HMM Match : DUF268 (HMM E-Value=2)                      27   8.1  
SB_33917| Best HMM Match : Stap_Strp_tox_C (HMM E-Value=1.3)           27   8.1  
SB_28889| Best HMM Match : ANF_receptor (HMM E-Value=1.1e-34)          27   8.1  
SB_7600| Best HMM Match : Stap_Strp_tox_C (HMM E-Value=4)              27   8.1  

>SB_5271| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 216

 Score = 62.9 bits (146), Expect = 1e-10
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 37  LMYGMLFSIKSFVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDL 96
           ++  M   + +  +K+SP     G    +   + LHC ++ +GLKF++ TD +  G+  L
Sbjct: 103 MLASMFHPLFAIAAKLSPEQRSSGIEVLEADSFKLHCFQSMTGLKFIVLTDPRQVGMDGL 162

Query: 97  LKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFIKQ 136
           LKKIY E+Y  + ++NP   +  PI  +LF   L   + Q
Sbjct: 163 LKKIY-ELYGDFALKNPFYSLDMPIRCELFDLNLQKALDQ 201


>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6500

 Score = 30.7 bits (66), Expect = 0.49
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 13/90 (14%)

Query: 56   DPKDGFSHYKT------SKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIY-AEIYVKY 108
            + ++ F+H K+      SKYTLH +      KF + T      V + +K IY  E  ++ 
Sbjct: 1707 ESEENFNHMKSVVNAVISKYTLHWI------KFGLITFGSKVTVWENMKGIYPTEAVLRK 1760

Query: 109  MIRNPLCEMGEPIVSDLFKSKLDLFIKQTP 138
             + N     G P +  +  S   LF  QTP
Sbjct: 1761 FVNNMPKPSGRPAIDKVLTSAAKLFKSQTP 1790


>SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 796

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)

Query: 102 AEIYVKYMIRN--PLCEMGEPI-VSDLFKSKLDLFIKQTPIHTVR 143
           AE Y K ++    P+ ++ EP+ V+ +F  KLDL + +TP  +VR
Sbjct: 270 AEEYTKLILPELKPVFKVQEPVQVTIIFLQKLDLLLSKTPKDSVR 314


>SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003)
          Length = 658

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 5   NLYIFDRYGTLLYYGEWNRSKQSGMSIEEEGKL-MYGMLFSIKS-FVSKISPLDPK 58
           N  +  R GT  YYG   R +Q   S +E G + M G L S+K  ++ K   +D K
Sbjct: 151 NFDVQSRGGTFTYYGLAER-RQKESSFKEWGTVNMRGFLLSVKDYYLEKCEKVDKK 205


>SB_38609| Best HMM Match : NAD_binding_5 (HMM E-Value=0)
          Length = 603

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 80  LKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSK 129
           +KF +N + + Q    +L        + Y+++ PL   G P+V+ LFK +
Sbjct: 513 IKFKVNDEEEFQNFNSVLS------ILSYLLKAPLVPSGAPVVNALFKQR 556


>SB_19200| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 852

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 80  LKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSK 129
           +KF +N + + Q    +L        + Y+++ PL   G P+V+ LFK +
Sbjct: 379 IKFKVNDEEEFQNFNSVLS------ILSYLLKAPLVPSGAPVVNALFKQR 422


>SB_46934| Best HMM Match : MORN (HMM E-Value=0)
          Length = 391

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 17 YYGEWNRSKQSGMSIEEEGKLMY 39
          Y GEW   K+ G+ +E  GK +Y
Sbjct: 60 YEGEWYCGKRHGLGVEYRGKWIY 82


>SB_57311| Best HMM Match : DUF268 (HMM E-Value=2)
          Length = 282

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 51  KISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIYAE 103
           K+ P D    FSH    +  +      + L+ V++ D Q + V  LL  +Y E
Sbjct: 149 KLQPNDNSVIFSHQSVQRKVMLYKHAQTNLQTVVDYDRQLKDVPRLLVPVYPE 201


>SB_33917| Best HMM Match : Stap_Strp_tox_C (HMM E-Value=1.3)
          Length = 225

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 51  KISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIYAE 103
           K+ P D    FSH    +  +      + L+ V++ D Q + V  LL  +Y E
Sbjct: 92  KLQPNDNSVIFSHQSVQRKVMLYKHAQTNLQTVVDYDRQLKDVPRLLVPVYPE 144


>SB_28889| Best HMM Match : ANF_receptor (HMM E-Value=1.1e-34)
          Length = 933

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 7   YIFDRYGTLLYYGEWNRSKQSGMSIEEEGKLMYGMLFSIKSFVSKISP--LDPK 58
           Y++D    LLY    NR+ Q+G  I +   L+  M+ S   F  K  P  +DPK
Sbjct: 251 YLYD--AVLLYAHALNRTLQAGGVINDGIGLVKRMMTSSPMFEGKTGPVTIDPK 302


>SB_7600| Best HMM Match : Stap_Strp_tox_C (HMM E-Value=4)
          Length = 220

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 51  KISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIYAE 103
           K+ P D    FSH    +  +      + L+ V++ D Q + V  LL  +Y E
Sbjct: 87  KLQPNDNSVIFSHQSVQRKVMLYKHAQTNLQTVVDYDRQLKDVPRLLVPVYPE 139


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.321    0.138    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,895,921
Number of Sequences: 59808
Number of extensions: 187630
Number of successful extensions: 365
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 356
Number of HSP's gapped (non-prelim): 14
length of query: 145
length of database: 16,821,457
effective HSP length: 76
effective length of query: 69
effective length of database: 12,276,049
effective search space: 847047381
effective search space used: 847047381
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)