Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002219-TA|BGIBMGA002219-PA|IPR007233|Sybindin-like
protein, IPR011012|Longin-like
(145 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032717-1|AAH32717.1| 145|Homo sapiens trafficking protein par... 182 4e-46
AF129332-1|AAD44697.1| 145|Homo sapiens MUM2 protein. 182 4e-46
BC010866-1|AAH10866.1| 219|Homo sapiens TRAPPC4 protein protein. 68 1e-11
AF151862-1|AAD34099.1| 219|Homo sapiens CGI-104 protein protein. 68 1e-11
AF105025-1|AAF21897.1| 219|Homo sapiens unknown protein. 68 1e-11
BC018024-1|AAH18024.1| 139|Homo sapiens trafficking protein par... 30 3.5
BC011369-1|AAH11369.1| 139|Homo sapiens trafficking protein par... 30 3.5
AB023170-1|BAA76797.1| 789|Homo sapiens KIAA0953 protein protein. 30 3.5
BC028127-1|AAH28127.1| 157|Homo sapiens chromosome 10 open read... 29 4.6
BC139832-1|AAI39833.1| 658|Homo sapiens JPH1 protein protein. 29 6.0
BC114464-1|AAI14465.1| 658|Homo sapiens JPH1 protein protein. 29 6.0
BC113856-1|AAI13857.1| 658|Homo sapiens JPH1 protein protein. 29 6.0
BC098299-1|AAH98299.1| 658|Homo sapiens JPH1 protein protein. 29 6.0
AK128653-1|BAC87551.1| 150|Homo sapiens protein ( Homo sapiens ... 29 6.0
AK092816-1|BAC03983.1| 184|Homo sapiens protein ( Homo sapiens ... 29 6.0
BC105809-1|AAI05810.1| 140|Homo sapiens trafficking protein par... 29 8.0
AK126779-1|BAC86686.1| 177|Homo sapiens protein ( Homo sapiens ... 29 8.0
AF089106-1|AAF00568.1| 140|Homo sapiens unknown protein. 29 8.0
>BC032717-1|AAH32717.1| 145|Homo sapiens trafficking protein
particle complex 1 protein.
Length = 145
Score = 182 bits (443), Expect = 4e-46
Identities = 79/144 (54%), Positives = 111/144 (77%)
Query: 1 MTIYNLYIFDRYGTLLYYGEWNRSKQSGMSIEEEGKLMYGMLFSIKSFVSKISPLDPKDG 60
MT++NLY+FDR G L+Y EW+R KQ+G+ EEE KLMYGMLFSI+SFVSK+SPLD KDG
Sbjct: 1 MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG 60
Query: 61 FSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPLCEMGEP 120
F ++TS+Y LH ETP+G+K VMNTD +RD+L IY+ +YV+ +++NPLC +G+
Sbjct: 61 FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQT 120
Query: 121 IVSDLFKSKLDLFIKQTPIHTVRA 144
+ S+LF+S+LD +++ P + RA
Sbjct: 121 VQSELFRSRLDSYVRSLPFFSARA 144
>AF129332-1|AAD44697.1| 145|Homo sapiens MUM2 protein.
Length = 145
Score = 182 bits (443), Expect = 4e-46
Identities = 79/144 (54%), Positives = 111/144 (77%)
Query: 1 MTIYNLYIFDRYGTLLYYGEWNRSKQSGMSIEEEGKLMYGMLFSIKSFVSKISPLDPKDG 60
MT++NLY+FDR G L+Y EW+R KQ+G+ EEE KLMYGMLFSI+SFVSK+SPLD KDG
Sbjct: 1 MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG 60
Query: 61 FSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPLCEMGEP 120
F ++TS+Y LH ETP+G+K VMNTD +RD+L IY+ +YV+ +++NPLC +G+
Sbjct: 61 FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQT 120
Query: 121 IVSDLFKSKLDLFIKQTPIHTVRA 144
+ S+LF+S+LD +++ P + RA
Sbjct: 121 VQSELFRSRLDSYVRSLPFFSARA 144
>BC010866-1|AAH10866.1| 219|Homo sapiens TRAPPC4 protein protein.
Length = 219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 36 KLMYGMLF-SIKSFVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVR 94
KLM +F S+ + S++SP G +T + LHC +T +G+KFV+ D + G+
Sbjct: 108 KLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGID 167
Query: 95 DLLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFIK 135
LL+KIY EIY + ++NP + PI +LF L L ++
Sbjct: 168 SLLRKIY-EIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207
>AF151862-1|AAD34099.1| 219|Homo sapiens CGI-104 protein protein.
Length = 219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 36 KLMYGMLF-SIKSFVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVR 94
KLM +F S+ + S++SP G +T + LHC +T +G+KFV+ D + G+
Sbjct: 108 KLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGID 167
Query: 95 DLLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFIK 135
LL+KIY EIY + ++NP + PI +LF L L ++
Sbjct: 168 SLLRKIY-EIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207
>AF105025-1|AAF21897.1| 219|Homo sapiens unknown protein.
Length = 219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 36 KLMYGMLF-SIKSFVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVR 94
KLM +F S+ + S++SP G +T + LHC +T +G+KFV+ D + G+
Sbjct: 108 KLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGID 167
Query: 95 DLLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFIK 135
LL+KIY EIY + ++NP + PI +LF L L ++
Sbjct: 168 SLLRKIY-EIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207
>BC018024-1|AAH18024.1| 139|Homo sapiens trafficking protein
particle complex 2-like protein.
Length = 139
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 64 YKTSKYTLHCLETPSGLKFVMNTDNQAQGVRD-LLKKIYAEIYVKY--MIRNPLCEMGEP 120
Y T Y ++ T S +KFVM D+ +RD ++ ++ +++ Y ++ NP G+
Sbjct: 62 YPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDR 121
Query: 121 IVSDLF 126
I S F
Sbjct: 122 IQSRAF 127
>BC011369-1|AAH11369.1| 139|Homo sapiens trafficking protein
particle complex 2-like protein.
Length = 139
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 64 YKTSKYTLHCLETPSGLKFVMNTDNQAQGVRD-LLKKIYAEIYVKY--MIRNPLCEMGEP 120
Y T Y ++ T S +KFVM D+ +RD ++ ++ +++ Y ++ NP G+
Sbjct: 62 YPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDR 121
Query: 121 IVSDLF 126
I S F
Sbjct: 122 IQSRAF 127
>AB023170-1|BAA76797.1| 789|Homo sapiens KIAA0953 protein protein.
Length = 789
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 21 WNRSKQSGMSIEEEGKLMYGMLFSI-------KSFVSKISPLDPKDGFSHYKTSKYTLHC 73
W R +G+S MYG+ K V I P DP+DG K T +
Sbjct: 45 WERRSDAGLSRGARPAEMYGVCGCCGALRPRYKRLVDNIFPEDPEDGLVKTNMEKLTFYA 104
Query: 74 LETPSGL 80
L P L
Sbjct: 105 LSAPEKL 111
>BC028127-1|AAH28127.1| 157|Homo sapiens chromosome 10 open reading
frame 53 protein.
Length = 157
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 55 LDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPL 114
L P +S+ T H L +P G+K V Q +DL + A+I + L
Sbjct: 75 LTPSSDKRTTSSSRLTFHQLSSPCGMK-VSPLQQFPQKTQDLTCIVLAQIGSCIHFQTNL 133
Query: 115 CEMGEPIVSDLFKSKLD 131
C++G P + + S L+
Sbjct: 134 CDLGWPGLDHMLISGLE 150
>BC139832-1|AAI39833.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 17 YYGEWNRSKQSGMSIEEEGKLMY 39
Y G W + K+ G+ +E +GK MY
Sbjct: 60 YQGYWAQGKRHGLGVETKGKWMY 82
>BC114464-1|AAI14465.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 17 YYGEWNRSKQSGMSIEEEGKLMY 39
Y G W + K+ G+ +E +GK MY
Sbjct: 60 YQGYWAQGKRHGLGVETKGKWMY 82
>BC113856-1|AAI13857.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 17 YYGEWNRSKQSGMSIEEEGKLMY 39
Y G W + K+ G+ +E +GK MY
Sbjct: 60 YQGYWAQGKRHGLGVETKGKWMY 82
>BC098299-1|AAH98299.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 17 YYGEWNRSKQSGMSIEEEGKLMY 39
Y G W + K+ G+ +E +GK MY
Sbjct: 60 YQGYWAQGKRHGLGVETKGKWMY 82
>AK128653-1|BAC87551.1| 150|Homo sapiens protein ( Homo sapiens
cDNA FLJ46812 fis, clone TRACH3036278. ).
Length = 150
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 61 FSHYKTSKYTLHCLE--TPSG--LKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPLCE 116
F H T T L+ TP G ++FV T++ A+ V+D K YA I P+C
Sbjct: 28 FLHCFTMASTAFNLQVATPGGKAMEFVDVTESNARWVQDFRLKAYASPAKLESIDEPICA 87
Query: 117 MGEPIVS 123
+G + +
Sbjct: 88 VGHGVAA 94
>AK092816-1|BAC03983.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ35497 fis, clone SMINT2008869. ).
Length = 184
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 61 FSHYKTSKYTLHCLE--TPSG--LKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPLCE 116
F H T T L+ TP G ++FV T++ A+ V+D K YA I P+C
Sbjct: 28 FLHCFTMASTAFNLQVATPGGKAMEFVDVTESNARWVQDFRLKAYASPAKLESIDEPICA 87
Query: 117 MGEPIVS 123
+G + +
Sbjct: 88 VGHGVAA 94
>BC105809-1|AAI05810.1| 140|Homo sapiens trafficking protein
particle complex 2-like protein.
Length = 140
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 64 YKTSKYTLHCLETPSGLKFVMNTDNQAQGVRD-LLKKIYAEIYVKY--MIRNPLCEMGEP 120
Y T Y ++ T S +KFVM D+ +RD ++ ++ +++ Y ++ NP G+
Sbjct: 62 YPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDR 121
Query: 121 IVS 123
I S
Sbjct: 122 IQS 124
>AK126779-1|BAC86686.1| 177|Homo sapiens protein ( Homo sapiens
cDNA FLJ44827 fis, clone BRACE3046837. ).
Length = 177
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 64 YKTSKYTLHCLETPSGLKFVMNTDNQAQGVRD-LLKKIYAEIYVKY--MIRNPLCEMGEP 120
Y T Y ++ T S +KFVM D+ +RD ++ ++ +++ Y ++ NP G+
Sbjct: 62 YPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDR 121
Query: 121 IVS 123
I S
Sbjct: 122 IQS 124
>AF089106-1|AAF00568.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 64 YKTSKYTLHCLETPSGLKFVMNTDNQAQGVRD-LLKKIYAEIYVKY--MIRNPLCEMGEP 120
Y T Y ++ T S +KFVM D+ +RD ++ ++ +++ Y ++ NP G+
Sbjct: 62 YPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDR 121
Query: 121 IVS 123
I S
Sbjct: 122 IQS 124
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.138 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,429,389
Number of Sequences: 224733
Number of extensions: 790552
Number of successful extensions: 1131
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 33
length of query: 145
length of database: 73,234,838
effective HSP length: 83
effective length of query: 62
effective length of database: 54,581,999
effective search space: 3384083938
effective search space used: 3384083938
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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