GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002219-TA|BGIBMGA002219-PA|IPR007233|Sybindin-like
protein, IPR011012|Longin-like
         (145 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4558|AAF57019.1|  145|Drosophila melanogaster CG1359-PA...   203   6e-53
AE014134-1552|AAF52701.1|  219|Drosophila melanogaster CG9298-PA...    67   1e-11
AY058512-1|AAL13741.1|  536|Drosophila melanogaster LD21669p pro...    30   1.1  
AE014134-152|AAF51458.1|  536|Drosophila melanogaster CG3561-PA ...    30   1.1  
BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p pro...    30   1.4  
AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-P...    30   1.4  
AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein.    30   1.4  
AY119442-1|AAM50096.1|  897|Drosophila melanogaster AT02134p pro...    28   4.3  
AE014296-3451|AAF51664.2|  931|Drosophila melanogaster CG12983-P...    28   4.3  
AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA...    28   5.7  
BT024359-1|ABC86421.1|  213|Drosophila melanogaster IP08110p pro...    27   10.0 
AE014298-1162|AAF46359.1|  213|Drosophila melanogaster CG15343-P...    27   10.0 

>AE014297-4558|AAF57019.1|  145|Drosophila melanogaster CG1359-PA
           protein.
          Length = 145

 Score =  203 bits (496), Expect = 6e-53
 Identities = 89/143 (62%), Positives = 122/143 (85%)

Query: 1   MTIYNLYIFDRYGTLLYYGEWNRSKQSGMSIEEEGKLMYGMLFSIKSFVSKISPLDPKDG 60
           MTI+NLYIFD++GTLL+Y EWNR+K+SG++ EEE KL YGMLFSIKSFVSKISP DPK+G
Sbjct: 1   MTIFNLYIFDKFGTLLHYAEWNRTKKSGITREEEAKLTYGMLFSIKSFVSKISPHDPKEG 60

Query: 61  FSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKIYAEIYVKYMIRNPLCEMGEP 120
           F +YKT++Y LH LETPSGLKFV+NTD  A  V++LL+++YA+++V++++R+PL   G  
Sbjct: 61  FLYYKTNRYALHYLETPSGLKFVLNTDTTAINVKELLQQLYAKVWVEFVVRDPLWTPGTV 120

Query: 121 IVSDLFKSKLDLFIKQTPIHTVR 143
           + S+LF+SKLD F++Q+PI  +R
Sbjct: 121 VTSELFQSKLDEFVRQSPIFGIR 143


>AE014134-1552|AAF52701.1|  219|Drosophila melanogaster CG9298-PA
           protein.
          Length = 219

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 41  MLFSIKSFVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKI 100
           M + + +  S++SP     G    +   +TLHC +T +G+KF++ ++    G+  LL+K+
Sbjct: 114 MFYPLFAIASQLSPEPKSSGIEILEADTFTLHCFQTLTGIKFIIISETGLNGIDLLLRKV 173

Query: 101 YAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFIKQ 136
           Y E+Y  Y+++NP   +  PI  +LF +KL   + Q
Sbjct: 174 Y-ELYSDYVLKNPFYSLEMPIRCELFDNKLQELLAQ 208


>AY058512-1|AAL13741.1|  536|Drosophila melanogaster LD21669p
           protein.
          Length = 536

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 96  LLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFIKQTPIHTVR 143
           L K +   IY    +R+ + +  + ++ D F  KL  F+++ P H V+
Sbjct: 245 LSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFPFHLVQ 292


>AE014134-152|AAF51458.1|  536|Drosophila melanogaster CG3561-PA
           protein.
          Length = 536

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 96  LLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFIKQTPIHTVR 143
           L K +   IY    +R+ + +  + ++ D F  KL  F+++ P H V+
Sbjct: 245 LSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFPFHLVQ 292


>BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p protein.
          Length = 2240

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/40 (30%), Positives = 24/40 (60%)

Query: 48   FVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTD 87
            FV K +   P +  ++Y+TS ++LH     SG++F+ + +
Sbjct: 2052 FVLKYNACQPVNNLNNYETSLFSLHSTGQDSGVEFLSSRE 2091


>AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-PA
            protein.
          Length = 2240

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/40 (30%), Positives = 24/40 (60%)

Query: 48   FVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTD 87
            FV K +   P +  ++Y+TS ++LH     SG++F+ + +
Sbjct: 2052 FVLKYNACQPVNNLNNYETSLFSLHSTGQDSGVEFLSSRE 2091


>AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein.
          Length = 2240

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/40 (30%), Positives = 24/40 (60%)

Query: 48   FVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTD 87
            FV K +   P +  ++Y+TS ++LH     SG++F+ + +
Sbjct: 2052 FVLKYNACQPVNNLNNYETSLFSLHSTGQDSGVEFLSSRE 2091


>AY119442-1|AAM50096.1|  897|Drosophila melanogaster AT02134p
           protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 105 YVKYMIRNPLCEMGEPIVSDLFKSKLD 131
           ++ + + N LC  GEPIV   F+S+++
Sbjct: 308 FLTFKVPNHLCLWGEPIVCQFFESEIE 334


>AE014296-3451|AAF51664.2|  931|Drosophila melanogaster CG12983-PA
           protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 105 YVKYMIRNPLCEMGEPIVSDLFKSKLD 131
           ++ + + N LC  GEPIV   F+S+++
Sbjct: 308 FLTFKVPNHLCLWGEPIVCQFFESEIE 334


>AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA
           protein.
          Length = 1174

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 23  RSKQSGMSIEEEGKLMYGMLFSIKSFV---SKISPLDPKDGFSHYKTSKYTLHCLETPSG 79
           R+K    ++++ G  M   L SI + V   S +S + P+D FS     +  +  LETP G
Sbjct: 248 RAKDDLATVKDNGVAMLVCLKSIDNVVHLASNLSGISPRDEFS---IRELVVVRLETPDG 304

Query: 80  LKFVMNTDNQAQGVRDLLKKIYA 102
             ++ +T +++   + ++ K YA
Sbjct: 305 RIYMRDTSHRSIEFK-VVNKSYA 326


>BT024359-1|ABC86421.1|  213|Drosophila melanogaster IP08110p
           protein.
          Length = 213

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 100 IYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFI 134
           ++A+  +   IR  +C  GEPI  D  K+K D F+
Sbjct: 124 LWAKENLAAQIRGHICPCGEPINYDDLKAKHDQFL 158


>AE014298-1162|AAF46359.1|  213|Drosophila melanogaster CG15343-PA
           protein.
          Length = 213

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 100 IYAEIYVKYMIRNPLCEMGEPIVSDLFKSKLDLFI 134
           ++A+  +   IR  +C  GEPI  D  K+K D F+
Sbjct: 124 LWAKENLAAQIRGHICPCGEPINYDDLKAKHDQFL 158


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.138    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,958,852
Number of Sequences: 52641
Number of extensions: 270019
Number of successful extensions: 473
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 461
Number of HSP's gapped (non-prelim): 12
length of query: 145
length of database: 24,830,863
effective HSP length: 78
effective length of query: 67
effective length of database: 20,724,865
effective search space: 1388565955
effective search space used: 1388565955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)