GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002218-TA|BGIBMGA002218-PA|undefined
         (73 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125183-1|AAI25184.1|   82|Homo sapiens similar to RIKEN cDNA 2...    76   2e-14
AL356754-1|CAH70226.1|   82|Homo sapiens protein ( Human DNA seq...    76   2e-14
AL138695-3|CAH72711.1|   82|Homo sapiens protein ( Human DNA seq...    76   2e-14
D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.               27   7.0  
BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc fing...    27   7.0  
BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein.         27   7.0  

>BC125183-1|AAI25184.1|   82|Homo sapiens similar to RIKEN cDNA
          2410129H14 protein.
          Length = 82

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 33/65 (50%), Positives = 48/65 (73%)

Query: 7  AQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVQ 66
          A +   RET  ++ +IS++LNTGLD+E LS C+RLCE G++PE L+ VIKE+RK  E ++
Sbjct: 16 ANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK 75

Query: 67 KASNL 71
           A N+
Sbjct: 76 AAENM 80


>AL356754-1|CAH70226.1|   82|Homo sapiens protein ( Human DNA
          sequence from clone RP11-11C5 on chromosome 13. ).
          Length = 82

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 33/65 (50%), Positives = 48/65 (73%)

Query: 7  AQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVQ 66
          A +   RET  ++ +IS++LNTGLD+E LS C+RLCE G++PE L+ VIKE+RK  E ++
Sbjct: 16 ANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK 75

Query: 67 KASNL 71
           A N+
Sbjct: 76 AAENM 80


>AL138695-3|CAH72711.1|   82|Homo sapiens protein ( Human DNA
          sequence from clone RP11-342J4 on chromosome 13. ).
          Length = 82

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 33/65 (50%), Positives = 48/65 (73%)

Query: 7  AQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVQ 66
          A +   RET  ++ +IS++LNTGLD+E LS C+RLCE G++PE L+ VIKE+RK  E ++
Sbjct: 16 ANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK 75

Query: 67 KASNL 71
           A N+
Sbjct: 76 AAENM 80


>D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.
          Length = 1943

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 9   VGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVI 55
           +  A  TFQ+  Q   +L   + V  L+T   LC+L ++P    H++
Sbjct: 748 ISSAHSTFQM-PQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHIL 793


>BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc finger
           protein.
          Length = 1942

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 9   VGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVI 55
           +  A  TFQ+  Q   +L   + V  L+T   LC+L ++P    H++
Sbjct: 747 ISSAHSTFQM-PQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHIL 792


>BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein.
          Length = 1163

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 9   VGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVI 55
           +  A  TFQ+  Q   +L   + V  L+T   LC+L ++P    H++
Sbjct: 748 ISSAHSTFQM-PQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHIL 793


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.130    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,187,031
Number of Sequences: 224733
Number of extensions: 255228
Number of successful extensions: 602
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 599
Number of HSP's gapped (non-prelim): 6
length of query: 73
length of database: 73,234,838
effective HSP length: 52
effective length of query: 21
effective length of database: 61,548,722
effective search space: 1292523162
effective search space used: 1292523162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)