Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002218-TA|BGIBMGA002218-PA|undefined
(73 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48717-4|CAA88607.1| 515|Caenorhabditis elegans Hypothetical pr... 29 0.52
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 28 0.69
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 27 1.6
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 26 2.8
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr... 26 3.7
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 26 3.7
AF016657-15|AAB93658.1| 257|Caenorhabditis elegans Hypothetical... 26 3.7
U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical pr... 25 8.5
U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical pr... 25 8.5
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 25 8.5
>Z48717-4|CAA88607.1| 515|Caenorhabditis elegans Hypothetical
protein T10B9.7 protein.
Length = 515
Score = 28.7 bits (61), Expect = 0.52
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 3 SERNAQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRK 60
S+RN ++ + +++ Q L G D ALS L V+P++ VI+EI +
Sbjct: 298 SKRNLKITKELSADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAR 355
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 0.69
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 3 SERNAQVGQARETFQL--IHQISQL---LNTGLDVEALSTCIRLC----ELGVDPEVLAH 53
++RNA++ F+L +H+I L +NT ++ + TC LC EL PEV A
Sbjct: 1090 AKRNAELAAYFTHFELQPMHRILTLRSAINTFFKMKQMKTCASLCKRLLELAPKPEVAAQ 1149
Query: 54 VIK 56
+ K
Sbjct: 1150 IRK 1152
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 27.1 bits (57), Expect = 1.6
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 16 FQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVQKASNLQT 73
F+L ++ +L G+ A +T + G+D V+ HV K + + G + + S + T
Sbjct: 210 FELEERLGRLFRKGMLKAAQTTGAWIITSGLDSGVVRHVAKALDEAGISARMRSQIVT 267
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 32 VEALSTCIRLCELGVDPEVLAHVIKEIRKMGEN 64
VE L+ C ++ EL D L++ ++E+R +GE+
Sbjct: 106 VELLAQCAKVKELERDKFQLSYQMQELRTIGEH 138
>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
protein R134.1 protein.
Length = 1140
Score = 25.8 bits (54), Expect = 3.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 39 IRLCELGVDPEVLAHVIKEIRKMGENVQ 66
I++ +LG+D + HV+ +R +G VQ
Sbjct: 252 IKISQLGLDTDEYVHVLISMRSIGFGVQ 279
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 25.8 bits (54), Expect = 3.7
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 39 IRLCELGVDPEVLAHVIKEIRKM--GENV 65
+ +C +PE LA +I+ IRK+ GENV
Sbjct: 85 VMVCISKANPEALAQLIEAIRKIVKGENV 113
>AF016657-15|AAB93658.1| 257|Caenorhabditis elegans Hypothetical
protein C16C4.14 protein.
Length = 257
Score = 25.8 bits (54), Expect = 3.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 27 NTGLDVEALSTCIRLCELGVDPE--VLAHVIKEIRKMGENVQKASNLQT 73
N +DVE I + EL + VL+H +K + + E + S++QT
Sbjct: 78 NDSIDVEIRVKIINITELPCTEKTFVLSHTVKNMSSIKEGEEYFSDIQT 126
>U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical
protein F20D12.1b protein.
Length = 867
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 31 DVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVQKAS 69
DV + C++ E D ++K ++KM +N++K S
Sbjct: 519 DVPNIHECLKFEERMSDIPTQHVLLKNVKKMRDNIEKKS 557
>U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical
protein F20D12.1a protein.
Length = 1030
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 31 DVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVQKAS 69
DV + C++ E D ++K ++KM +N++K S
Sbjct: 682 DVPNIHECLKFEERMSDIPTQHVLLKNVKKMRDNIEKKS 720
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 24.6 bits (51), Expect = 8.5
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 14 ETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAH 53
+T L + LL GL + T LC G P L H
Sbjct: 1851 DTRHLFEKHGSLLKKGLSLSHSPTLSELCTKGQPPPALKH 1890
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.130 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,462,296
Number of Sequences: 27539
Number of extensions: 41989
Number of successful extensions: 138
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 130
Number of HSP's gapped (non-prelim): 11
length of query: 73
length of database: 12,573,161
effective HSP length: 53
effective length of query: 20
effective length of database: 11,113,594
effective search space: 222271880
effective search space used: 222271880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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