Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002217-TA|BGIBMGA002217-PA|IPR000198|RhoGAP,
IPR008936|Rho GTPase activation protein
(151 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 109 8e-25
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 80 8e-16
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 78 2e-15
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 78 2e-15
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 68 3e-12
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 64 4e-11
Z46812-5|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z46812-4|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 64 4e-11
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 64 4e-11
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 64 4e-11
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z66521-16|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 61 3e-10
Z66521-15|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 61 3e-10
Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 51 4e-07
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 50 9e-07
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 50 9e-07
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 41 4e-04
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 41 4e-04
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 41 4e-04
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 41 4e-04
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 40 6e-04
AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical ... 37 0.007
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 33 0.066
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 28 2.5
AC024818-4|AAF60782.5| 457|Caenorhabditis elegans Hypothetical ... 28 3.3
AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta... 27 4.3
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical... 27 7.6
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 109 bits (262), Expect = 8e-25
Identities = 53/104 (50%), Positives = 67/104 (64%)
Query: 4 DQNNTSVISKNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREI 63
DQ+N + DIHVLTG+LKLFFREL +PL P SL +A + + K+F E+
Sbjct: 662 DQDNYKALVSEEDIHVLTGALKLFFRELTDPLFPISLHKEYTSAMQMPNATTRFKKFEEL 721
Query: 64 IQALPQCNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTI 107
+ LP NR+TLK LL HL RV +S +NRM NLAIVFGPT+
Sbjct: 722 LSRLPNENRETLKMLLRHLNRVASHSSQNRMQQHNLAIVFGPTL 765
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 79.8 bits (188), Expect = 8e-16
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 9 SVISKNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALP 68
SV ++ +HVLT +K FFREL EP+I + L+ L ++ +++ +I+ LP
Sbjct: 1607 SVNLEDIGVHVLTTLVKAFFRELAEPIIIFDLYENFLNVSEVEDMGERVRCLSVMIELLP 1666
Query: 69 QCNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNN 128
+ NR L L+ HL RV N+M NLA++FGP +L +A A+ D +Q
Sbjct: 1667 KPNRAVLDRLMYHLARVADQEAVNKMGCNNLALIFGPCVLRRQDSAHAQEQLNDVARQTG 1726
Query: 129 VVDILLNE 136
V L+ E
Sbjct: 1727 CVQTLIEE 1734
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 78.2 bits (184), Expect = 2e-15
Identities = 39/133 (29%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRDTL 75
D++V++ LK+F R+L EPL+ L+ + A I ++ + R +++ LP+ + DTL
Sbjct: 856 DVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLLRKLPRPHYDTL 915
Query: 76 KFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNNVVDILLN 135
+FL+ HL + ++S+ N+M NLA++FGP+I+ P + Q +++ L++
Sbjct: 916 RFLIVHLSEITKHSDVNKMECRNLALMFGPSIV-RPSDDNMATMVTHMSDQCKIIETLIH 974
Query: 136 EFNEIFSEENKTK 148
+F E + T+
Sbjct: 975 YNLWMFDESSTTE 987
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 78.2 bits (184), Expect = 2e-15
Identities = 39/133 (29%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRDTL 75
D++V++ LK+F R+L EPL+ L+ + A I ++ + R +++ LP+ + DTL
Sbjct: 734 DVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLLRKLPRPHYDTL 793
Query: 76 KFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNNVVDILLN 135
+FL+ HL + ++S+ N+M NLA++FGP+I+ P + Q +++ L++
Sbjct: 794 RFLIVHLSEITKHSDVNKMECRNLALMFGPSIV-RPSDDNMATMVTHMSDQCKIIETLIH 852
Query: 136 EFNEIFSEENKTK 148
+F E + T+
Sbjct: 853 YNLWMFDESSTTE 865
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 68.1 bits (159), Expect = 3e-12
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 11 ISKNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQC 70
+ SD + G LKL+FREL+EP+ P +F + + ++ RE++ LP
Sbjct: 588 LDDGSDANSAAGVLKLYFRELREPIFPIFMFEQFCDCAKSESPTEFVRRARELVSKLPVS 647
Query: 71 NRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAP 111
+ L+FL L + +++++N M NLAI FGPT+L P
Sbjct: 648 HVLLLRFLFAFLSHLCEFADENMMEPHNLAICFGPTLLPIP 688
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 64.1 bits (149), Expect = 4e-11
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSI---KPREAKIKEFREIIQALPQCNR 72
D+ V+T +LK F R+LK+PLIP + ++ A ++ P ++ +I LPQ NR
Sbjct: 486 DVEVITDTLKRFLRDLKDPLIPRTSRQELIVAANLYSTDPDNGRLA-LNRVICELPQANR 544
Query: 73 DTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAPV 112
DTL +L H +V S +N+M+ +A + P ++ PV
Sbjct: 545 DTLAYLFIHWRKVIAQSSRNKMNCEAMARMVAPAVMGHPV 584
>Z46812-5|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 64.1 bits (149), Expect = 4e-11
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 20 LTGSLKLFFRELKEPLIPYSLFHRVLA----ACSIKP-----REAKIKEFREIIQALPQC 70
L +KL+ R+L EPL+ + L+ + CS + E ++++ R++ + LP
Sbjct: 249 LASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVH 308
Query: 71 NRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW-APVTAKARNIAVDCIQQNNV 129
N +TLKF++ HL RV + E N M +NL+ V P+++W +P + + N
Sbjct: 309 NYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWMSPKRIDHTSAIMHTQYTNKA 368
Query: 130 VDILLNEFNEIFSEENK 146
+++++ IF + +
Sbjct: 369 IEVMIRNSYHIFGMDRQ 385
>Z46812-4|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 64.1 bits (149), Expect = 4e-11
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 20 LTGSLKLFFRELKEPLIPYSLFHRVLA----ACSIKP-----REAKIKEFREIIQALPQC 70
L +KL+ R+L EPL+ + L+ + CS + E ++++ R++ + LP
Sbjct: 478 LASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVH 537
Query: 71 NRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW-APVTAKARNIAVDCIQQNNV 129
N +TLKF++ HL RV + E N M +NL+ V P+++W +P + + N
Sbjct: 538 NYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWMSPKRIDHTSAIMHTQYTNKA 597
Query: 130 VDILLNEFNEIFSEENK 146
+++++ IF + +
Sbjct: 598 IEVMIRNSYHIFGMDRQ 614
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 64.1 bits (149), Expect = 4e-11
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 20 LTGSLKLFFRELKEPLIPYSLFHRVLA----ACSIKP-----REAKIKEFREIIQALPQC 70
L +KL+ R+L EPL+ + L+ + CS + E ++++ R++ + LP
Sbjct: 249 LASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVH 308
Query: 71 NRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW-APVTAKARNIAVDCIQQNNV 129
N +TLKF++ HL RV + E N M +NL+ V P+++W +P + + N
Sbjct: 309 NYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWMSPKRIDHTSAIMHTQYTNKA 368
Query: 130 VDILLNEFNEIFSEENK 146
+++++ IF + +
Sbjct: 369 IEVMIRNSYHIFGMDRQ 385
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 64.1 bits (149), Expect = 4e-11
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 20 LTGSLKLFFRELKEPLIPYSLFHRVLA----ACSIKP-----REAKIKEFREIIQALPQC 70
L +KL+ R+L EPL+ + L+ + CS + E ++++ R++ + LP
Sbjct: 478 LASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVH 537
Query: 71 NRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW-APVTAKARNIAVDCIQQNNV 129
N +TLKF++ HL RV + E N M +NL+ V P+++W +P + + N
Sbjct: 538 NYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWMSPKRIDHTSAIMHTQYTNKA 597
Query: 130 VDILLNEFNEIFSEENK 146
+++++ IF + +
Sbjct: 598 IEVMIRNSYHIFGMDRQ 614
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 64.1 bits (149), Expect = 4e-11
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 20 LTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRDTLKFLL 79
++ ++K F R L EPL+ + L + + A + +I + LP + L+ ++
Sbjct: 131 ISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVV 190
Query: 80 EHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNNVVDILLNEFNE 139
HL RV S +N M ++NL + FGPT+L P I +D N VV++L++ +++
Sbjct: 191 RHLKRVADLSNENLMTVSNLGVCFGPTLL-RPKEETVAAI-MDIKFCNVVVEVLISNYDK 248
Query: 140 IFSEENKT 147
IF + K+
Sbjct: 249 IFKSKPKS 256
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 64.1 bits (149), Expect = 4e-11
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 20 LTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRDTLKFLL 79
++ ++K F R L EPL+ + L + + A + +I + LP + L+ ++
Sbjct: 471 ISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVV 530
Query: 80 EHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNNVVDILLNEFNE 139
HL RV S +N M ++NL + FGPT+L P I +D N VV++L++ +++
Sbjct: 531 RHLKRVADLSNENLMTVSNLGVCFGPTLL-RPKEETVAAI-MDIKFCNVVVEVLISNYDK 588
Query: 140 IFSEENKT 147
IF + K+
Sbjct: 589 IFKSKPKS 596
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 64.1 bits (149), Expect = 4e-11
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 20 LTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRDTLKFLL 79
++ ++K F R L EPL+ + L + + A + +I + LP + L+ ++
Sbjct: 471 ISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVV 530
Query: 80 EHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNNVVDILLNEFNE 139
HL RV S +N M ++NL + FGPT+L P I +D N VV++L++ +++
Sbjct: 531 RHLKRVADLSNENLMTVSNLGVCFGPTLL-RPKEETVAAI-MDIKFCNVVVEVLISNYDK 588
Query: 140 IFSEENKT 147
IF + K+
Sbjct: 589 IFKSKPKS 596
>Z66521-16|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 61.3 bits (142), Expect = 3e-10
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 2 RIDQNNTSVISKNSDIHVLTGS--LKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKE 59
+ID N N + L S LK FFR L EPL L+ + LAA S + K
Sbjct: 106 KIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPK-LAALSEVSKTEKSAA 164
Query: 60 FREIIQALPQCNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW 109
+E ++ LP+ N LK +++ L RV + S+ N M NL++VFGP + W
Sbjct: 165 VKEFVKLLPRENYILLKTVIKFLTRVAENSKVNLMTANNLSVVFGPNLTW 214
>Z66521-15|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 61.3 bits (142), Expect = 3e-10
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 2 RIDQNNTSVISKNSDIHVLTGS--LKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKE 59
+ID N N + L S LK FFR L EPL L+ + LAA S + K
Sbjct: 305 KIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPK-LAALSEVSKTEKSAA 363
Query: 60 FREIIQALPQCNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW 109
+E ++ LP+ N LK +++ L RV + S+ N M NL++VFGP + W
Sbjct: 364 VKEFVKLLPRENYILLKTVIKFLTRVAENSKVNLMTANNLSVVFGPNLTW 413
>Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical
protein F47A4.3b protein.
Length = 742
Score = 59.3 bits (137), Expect = 1e-09
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPR-EAKIKEFREIIQALPQCNRDT 74
DI+ ++ LK +FR+L PL Y + +++ A + K++ R ++ +P+ + T
Sbjct: 328 DIYSVSSLLKQYFRQLPNPLFTYQAYPKLIEAFEKEDSLSEKVESLRFSLETMPEAHYRT 387
Query: 75 LKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVT 113
KFL+EHL R+ + M NLAIV+ P + P T
Sbjct: 388 AKFLMEHLTRLCKSKSLTDMTSKNLAIVWSPNLFRPPPT 426
>Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical
protein F47A4.3a protein.
Length = 759
Score = 59.3 bits (137), Expect = 1e-09
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPR-EAKIKEFREIIQALPQCNRDT 74
DI+ ++ LK +FR+L PL Y + +++ A + K++ R ++ +P+ + T
Sbjct: 345 DIYSVSSLLKQYFRQLPNPLFTYQAYPKLIEAFEKEDSLSEKVESLRFSLETMPEAHYRT 404
Query: 75 LKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVT 113
KFL+EHL R+ + M NLAIV+ P + P T
Sbjct: 405 AKFLMEHLTRLCKSKSLTDMTSKNLAIVWSPNLFRPPPT 443
>Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical
protein F45H7.2b protein.
Length = 722
Score = 58.0 bits (134), Expect = 3e-09
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 14 NSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRD 73
++ +H + LK +FR+L EPL+ + CS+ P +I + I LP NR+
Sbjct: 339 STQVHDVADLLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAILLLPDENRE 398
Query: 74 TLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTI 107
LK LL L V + S+ N M NL++ F P++
Sbjct: 399 ALKTLLLFLKEVSRNSQVNNMTAQNLSVCFTPSL 432
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 58.0 bits (134), Expect = 3e-09
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 14 NSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRD 73
++ +H + LK +FR+L EPL+ + CS+ P +I + I LP NR+
Sbjct: 459 STQVHDVADLLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAILLLPDENRE 518
Query: 74 TLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTI 107
LK LL L V + S+ N M NL++ F P++
Sbjct: 519 ALKTLLLFLKEVSRNSQVNNMTAQNLSVCFTPSL 552
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 55.6 bits (128), Expect = 1e-08
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 10 VISKNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQ 69
V S ++ +HV +LK FF L E LIP + R + KI R+ + LP
Sbjct: 1208 VSSFDTPVHVAATALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPV 1267
Query: 70 CNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNNV 129
N+ L++L+ HL +V S K M+ NL+ V+ PT L+ PV A ++ I
Sbjct: 1268 SNQKVLQYLVTHLTKV-SCSPKTVMNSNNLSKVWTPT-LFRPVFASYEELSSGIIAFQLA 1325
Query: 130 VDILLNEFNEIFSE 143
+++L+ + +F++
Sbjct: 1326 LEMLIFNSHSLFNQ 1339
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 50.8 bits (116), Expect = 4e-07
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 14 NSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRD 73
N+D H + +LK + REL +PL SL + A +++ E + ++ + + +R
Sbjct: 305 NNDPHAVASTLKAYLRELPDPLTMDSLQSDWVEAINLEGEE-RFSAIDRCLKKMTRGHRQ 363
Query: 74 TLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTI 107
L +L++ L ++ E+ M+ +NLAIVF PT+
Sbjct: 364 NLIYLMKFLCDLEAKREETSMNASNLAIVFAPTM 397
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 49.6 bits (113), Expect = 9e-07
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 10 VISKNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQ 69
V S ++ +HV +LK FF L E LIP + R + KI R+ + LP
Sbjct: 1208 VSSFDTPVHVAATALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPV 1267
Query: 70 CNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTI 107
N+ L++L+ HL +V S K M+ NL+ V+ PT+
Sbjct: 1268 SNQKVLQYLVTHLTKV-SCSPKTVMNSNNLSKVWTPTL 1304
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 49.6 bits (113), Expect = 9e-07
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 10 VISKNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQ 69
V + ++ + L+ FFR+L PL P S + + + + ++I
Sbjct: 633 VHENDETVYAVADVLRQFFRKLDAPLFPSSSQADLFDLATESQSDELCARYAQLINTFEL 692
Query: 70 CNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTI 107
+R TLK L+ HL V +++++NR + NLA VF ++
Sbjct: 693 VHRSTLKKLIGHLKNVSEHAQENRASVENLAKVFAASL 730
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 40.7 bits (91), Expect = 4e-04
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIK-PREAKIKE--FREIIQALPQCNR 72
D +V+ +K F REL EPLI + +L A S+ P + + +II L +
Sbjct: 556 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 615
Query: 73 DTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW 109
+ L +L+HL V S N + L+++F P + +
Sbjct: 616 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLLFF 652
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 40.7 bits (91), Expect = 4e-04
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIK-PREAKIKE--FREIIQALPQCNR 72
D +V+ +K F REL EPLI + +L A S+ P + + +II L +
Sbjct: 754 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 813
Query: 73 DTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW 109
+ L +L+HL V S N + L+++F P + +
Sbjct: 814 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLLFF 850
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 40.7 bits (91), Expect = 4e-04
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIK-PREAKIKE--FREIIQALPQCNR 72
D +V+ +K F REL EPLI + +L A S+ P + + +II L +
Sbjct: 822 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 881
Query: 73 DTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW 109
+ L +L+HL V S N + L+++F P + +
Sbjct: 882 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLLFF 918
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 40.7 bits (91), Expect = 4e-04
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIK-PREAKIKE--FREIIQALPQCNR 72
D +V+ +K F REL EPLI + +L A S+ P + + +II L +
Sbjct: 754 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 813
Query: 73 DTLKFLLEHLLRVQQYSEKNRMHIANLAIVFGPTILW 109
+ L +L+HL V S N + L+++F P + +
Sbjct: 814 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLLFF 850
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 40.3 bits (90), Expect = 6e-04
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 13 KNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNR 72
+N+ H + LK +FR+L + L+P + + A + E +I+ R + L
Sbjct: 581 ENTTSHDVATLLKEYFRDLPQSLLPGEHYSAYIGAAKLNVDE-RIEAIRLLFALLVSPIL 639
Query: 73 DTLKFLLEHLLRVQQYSEK-----------NRMHIANLAIVFGPTILWAPVTAKARNIAV 121
DTL LL+ L V +S+ N+M NLA +F P+IL K
Sbjct: 640 DTLFVLLKFLHEVSCHSQDRHDEDGELLSGNKMDARNLATIFAPSILRVD-HDKLHETLA 698
Query: 122 DCIQQNNVVDILLNEFNEIF 141
+ Q +V+ +++ EIF
Sbjct: 699 ENEHQVIIVETMISNVEEIF 718
>AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical
protein BE0003N10.2 protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.007
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 16 DIHVLTGSLKLFFRELKEPLIPYSLFHRVLAA 47
DIH + G LKL+FR L + LIP+S+ ++L A
Sbjct: 364 DIHTVCGLLKLYFRLLPQQLIPFSVHKQLLVA 395
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 33.5 bits (73), Expect = 0.066
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 67 LPQCNRDTLKFLLEHLLRVQQYSEKNRMHIANLAIVF 103
L + TL +++ L R+ +SE+++M I NLAIVF
Sbjct: 183 LSDAHASTLGYVMRQLNRIAAHSEQHKMSIENLAIVF 219
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 15 SDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACS 49
+D H G +K F R++ EP++P F + +C+
Sbjct: 119 ADAHDAAGLIKRFLRQIPEPVVPIE-FDSIAESCN 152
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 47 ACSIKPREAKIKEFRE-IIQALPQCNRDTLKFLLEHLLRVQQYSEKNRMHIAN 98
A +K R+A+I+ + I + L QC+RD K L+ ++++ K +I+N
Sbjct: 890 AAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKRQKLEKDIAKETANISN 942
>AC024818-4|AAF60782.5| 457|Caenorhabditis elegans Hypothetical
protein Y54H5A.4 protein.
Length = 457
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 11 ISKNSDIHVLTGSLKLFFRELKEPLIPYSLFHRVLAACSIKPREAKIKEFR 61
ISK ++G++ F +E L P +FH + C K EA ++F+
Sbjct: 195 ISKIRSPQAISGAIIKGFLAKREGLSPCDVFHAAVMPCFDKKLEASREQFK 245
>AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta
family protein 3 protein.
Length = 1092
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 39 SLFHRVLAACSIKPRE----AKIKEFREIIQALPQCNRDTLKFLLEHLLRVQQYSEKNRM 94
SL VL C+ E + EF E+ +LP+C + +L+ L + EKN M
Sbjct: 210 SLVPNVLQVCNETSDEDDSDGPLGEFAELASSLPKCLNTHMSQVLQVTLAIAGNKEKNEM 269
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 111 PVTAKARNIAVDCIQQNNVVDILLNEFNEIFSEENKTK 148
P A ++AVDC+ +N + L N IF E +TK
Sbjct: 598 PTNATRYDLAVDCLSRNWEQERLPKFPNRIFDIEKQTK 635
>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
protein F25G6.2 protein.
Length = 1143
Score = 26.6 bits (56), Expect = 7.6
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 26 LFFRELKE-PLIPYSLFHRVLAACSIKPREAKIKEFREIIQALPQCNRDTLKFLLEHLLR 84
LF++ L E PL+ + R+ C K E + RE+I + L+FL
Sbjct: 672 LFYKVLLETPLLTPNAIERLKQVCLAKENEHGMAMLRELIMTRNRQRPQLLQFLFGLFFM 731
Query: 85 VQQYSEKNRMHIANLAIVFGPTILWAPVTAKARNIAVDCIQQNNVVDILLNEFNEIFSEE 144
+ + + + + + P I + ++ +AR DC+Q++ + + +E ++ +++E
Sbjct: 732 ERPELRSSCLEVVK-ELCYLPFIR-SSLSDQARMQIHDCLQESPPMYMRSSEDSDQWTDE 789
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,606,542
Number of Sequences: 27539
Number of extensions: 134325
Number of successful extensions: 376
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 326
Number of HSP's gapped (non-prelim): 37
length of query: 151
length of database: 12,573,161
effective HSP length: 75
effective length of query: 76
effective length of database: 10,507,736
effective search space: 798587936
effective search space used: 798587936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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