GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002215-TA|BGIBMGA002215-PA|IPR003397|Mitochondrial
import inner membrane translocase, subunit Tim17/22
         (168 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   5.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   5.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   5.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.1  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 88  DPWNSIMSGALTGGILAARNGKEQCTGNG 116
           +P  +I  G L G I    NG+E C+  G
Sbjct: 3   NPIVTIEEGKLLGKISTNINGEEFCSFQG 31


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 88  DPWNSIMSGALTGGILAARNGKEQCTGNG 116
           +P  +I  G L G I    NG+E C+  G
Sbjct: 1   NPIVTIEEGKLLGKISTNINGEEFCSFQG 29


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 88  DPWNSIMSGALTGGILAARNGKEQCTGNG 116
           +P  +I  G L G I    NG+E C+  G
Sbjct: 3   NPIVTIEEGKLLGKISTNINGEEFCSFQG 31


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 88  DPWNSIMSGALTGGILAARNGKEQCTGNG 116
           +P  +I  G L G I    NG+E C+  G
Sbjct: 1   NPIVTIDEGKLLGKISTNINGEEFCSFQG 29


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.138    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,997
Number of Sequences: 317
Number of extensions: 1453
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 168
length of database: 114,650
effective HSP length: 52
effective length of query: 116
effective length of database: 98,166
effective search space: 11387256
effective search space used: 11387256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)