GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002215-TA|BGIBMGA002215-PA|IPR003397|Mitochondrial
import inner membrane translocase, subunit Tim17/22
         (168 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    25   1.2  
AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.           24   2.8  
AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.           24   2.8  
AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.           23   3.7  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   6.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           22   8.6  
AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.           22   8.6  
AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.           22   8.6  
AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.           22   8.6  

>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 49  LGSLAAVKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNG 108
           LG+   V++   ++  NF ++  +F  I C  +          +I+S  L G +L A+  
Sbjct: 232 LGTSQLVRDNPALLNVNFWIYSVVFKLIPCIAL----------TILSLRLIGALLEAKQR 281

Query: 109 KEQCTG 114
           + Q TG
Sbjct: 282 RSQLTG 287


>AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 142 EQFKPQQPILEDPSILGQSQGQAQSYQ 168
           +Q++  QP  + PS++G  Q Q Q  Q
Sbjct: 3   DQYQYAQPQRQHPSLVGPQQQQHQQQQ 29


>AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 142 EQFKPQQPILEDPSILGQSQGQAQSYQ 168
           +Q++  QP  + PS++G  Q Q Q  Q
Sbjct: 3   DQYQYAQPQRQHPSLVGPQQQQHQQQQ 29


>AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 142 EQFKPQQPILEDPSILGQSQGQAQSYQ 168
           +Q++  QP  + PS++G  Q Q Q  Q
Sbjct: 3   DQYQYAQPQRQHPSLVGPLQQQQQQQQ 29


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 139 LTAEQFKPQQPILEDPSILGQSQGQAQSYQ 168
           +  +Q++  QP  + PS++   Q Q Q +Q
Sbjct: 71  IQTDQYQYAQPQRQHPSLVAGPQQQQQQHQ 100


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 141 AEQFKPQQPILEDPSILGQSQGQAQSYQ 168
           A+Q++PQQ   +      QSQ Q Q  Q
Sbjct: 407 AQQYQPQQQQQQQQQQQPQSQQQQQQQQ 434


>AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 142 EQFKPQQPILEDPSILGQSQGQAQSYQ 168
           +Q++  QP  + PS++   Q Q Q +Q
Sbjct: 3   DQYQYAQPQRQHPSLVAGPQQQQQQHQ 29


>AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 142 EQFKPQQPILEDPSILGQSQGQAQSYQ 168
           +Q++  QP  + PS++   Q Q Q +Q
Sbjct: 3   DQYQYAQPQRQHPSLVAGPQQQQQQHQ 29


>AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 142 EQFKPQQPILEDPSILGQSQGQAQSYQ 168
           +Q++  QP  + PS++   Q Q Q +Q
Sbjct: 3   DQYQYAQPQRQHPSLVAGPQQQQQQHQ 29


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.138    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,258
Number of Sequences: 2123
Number of extensions: 6044
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 9
length of query: 168
length of database: 516,269
effective HSP length: 60
effective length of query: 108
effective length of database: 388,889
effective search space: 42000012
effective search space used: 42000012
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)