Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002215-TA|BGIBMGA002215-PA|IPR003397|Mitochondrial
import inner membrane translocase, subunit Tim17/22
(168 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010142-1|AAH10142.1| 172|Homo sapiens translocase of inner mi... 187 1e-47
AJ005895-1|CAA06752.1| 172|Homo sapiens protein translocase pro... 187 1e-47
AF034790-1|AAC24694.1| 172|Homo sapiens inner mitochondrial mem... 187 1e-47
X97544-1|CAA66146.1| 171|Homo sapiens preprotein translocase pr... 180 2e-45
BC020833-1|AAH20833.1| 171|Homo sapiens translocase of inner mi... 180 2e-45
BC015098-1|AAH15098.1| 171|Homo sapiens translocase of inner mi... 180 2e-45
BC009784-1|AAH09784.1| 171|Homo sapiens translocase of inner mi... 180 2e-45
BC007106-1|AAH07106.1| 171|Homo sapiens translocase of inner mi... 180 2e-45
BC004439-1|AAH04439.1| 171|Homo sapiens translocase of inner mi... 180 2e-45
BC000294-1|AAH00294.2| 171|Homo sapiens TIMM17A protein protein. 180 2e-45
AF106622-1|AAD19596.1| 171|Homo sapiens mitochondrial inner mem... 180 2e-45
BC016817-1|AAH16817.1| 134|Homo sapiens TIMM17A protein protein. 136 4e-32
BC002324-1|AAH02324.1| 194|Homo sapiens translocase of inner mi... 42 0.001
AK000830-1|BAA91392.1| 194|Homo sapiens protein ( Homo sapiens ... 42 0.001
AF155330-1|AAD40106.1| 194|Homo sapiens putative membrane prote... 37 0.030
X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein. 29 6.1
U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein. 29 6.1
AF105687-1|AAC95473.1| 421|Homo sapiens thyroglobulin protein. 29 6.1
AB209159-1|BAD92396.1| 1574|Homo sapiens Thyroglobulin precursor... 29 6.1
>BC010142-1|AAH10142.1| 172|Homo sapiens translocase of inner
mitochondrial membrane 17 homolog B (yeast) protein.
Length = 172
Score = 187 bits (456), Expect = 1e-47
Identities = 90/162 (55%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRNAP+G ++ GS AV+ R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FSTIDC LV +R KEDPWNSI SGALTG +LAAR+G G+
Sbjct: 61 QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGS---AM 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQG 162
ILLALIEG+GI+ TR TA+QF+ P LEDPS L G
Sbjct: 118 MGGILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDG 159
>AJ005895-1|CAA06752.1| 172|Homo sapiens protein translocase
protein.
Length = 172
Score = 187 bits (456), Expect = 1e-47
Identities = 90/162 (55%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRNAP+G ++ GS AV+ R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FSTIDC LV +R KEDPWNSI SGALTG +LAAR+G G+
Sbjct: 61 QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGS---AM 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQG 162
ILLALIEG+GI+ TR TA+QF+ P LEDPS L G
Sbjct: 118 MGGILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDG 159
>AF034790-1|AAC24694.1| 172|Homo sapiens inner mitochondrial
membrane translocase Tim17b protein.
Length = 172
Score = 187 bits (456), Expect = 1e-47
Identities = 90/162 (55%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRNAP+G ++ GS AV+ R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FSTIDC LV +R KEDPWNSI SGALTG +LAAR+G G+
Sbjct: 61 QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGS---AM 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQG 162
ILLALIEG+GI+ TR TA+QF+ P LEDPS L G
Sbjct: 118 MGGILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDG 159
>X97544-1|CAA66146.1| 171|Homo sapiens preprotein translocase
protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>BC020833-1|AAH20833.1| 171|Homo sapiens translocase of inner
mitochondrial membrane 17 homolog A (yeast) protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>BC015098-1|AAH15098.1| 171|Homo sapiens translocase of inner
mitochondrial membrane 17 homolog A (yeast) protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>BC009784-1|AAH09784.1| 171|Homo sapiens translocase of inner
mitochondrial membrane 17 homolog A (yeast) protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>BC007106-1|AAH07106.1| 171|Homo sapiens translocase of inner
mitochondrial membrane 17 homolog A (yeast) protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>BC004439-1|AAH04439.1| 171|Homo sapiens translocase of inner
mitochondrial membrane 17 homolog A (yeast) protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>BC000294-1|AAH00294.2| 171|Homo sapiens TIMM17A protein protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>AF106622-1|AAD19596.1| 171|Homo sapiens mitochondrial inner
membrane preprotein translocase Tim17a protein.
Length = 171
Score = 180 bits (439), Expect = 2e-45
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 1 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 60
M+EY REPCPWRI+DD +F +IKGFRN+P+G + ++ GSL A+K R+P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 61 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGKEQCTGNGRKCT 120
+GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGALTG ILAARNG G+
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS---AA 117
Query: 121 YWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILGQSQ 161
ILLALIEG GI+ TR + QF EDPS L +Q
Sbjct: 118 MGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ 158
>BC016817-1|AAH16817.1| 134|Homo sapiens TIMM17A protein protein.
Length = 134
Score = 136 bits (329), Expect = 4e-32
Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
Query: 39 NAPLGFSRKMLGSLAAVKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGAL 98
N+P+G + ++ GSL A+K R+P +GG+FAVWGG+FS IDCS+V +R KEDPWNSI SGAL
Sbjct: 2 NSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGAL 61
Query: 99 TGGILAARNGKEQCTGNGRKCTYWRILLALIEGIGIMFTRLTAEQFKPQQPILEDPSILG 158
TG ILAARNG G+ ILLALIEG GI+ TR + QF EDPS L
Sbjct: 62 TGAILAARNGPVAMVGS---AAMGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLP 118
Query: 159 QSQ 161
+Q
Sbjct: 119 STQ 121
>BC002324-1|AAH02324.1| 194|Homo sapiens translocase of inner
mitochondrial membrane 22 homolog (yeast) protein.
Length = 194
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 65 NFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNG 108
NFA+ G MFS +C + R D NS++SG +TGG + R G
Sbjct: 128 NFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAG 171
>AK000830-1|BAA91392.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ20823 fis, clone ADSE00282. ).
Length = 194
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 65 NFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNG 108
NFA+ G MFS +C + R D NS++SG +TGG + R G
Sbjct: 128 NFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAG 171
>AF155330-1|AAD40106.1| 194|Homo sapiens putative membrane protein
protein.
Length = 194
Score = 37.1 bits (82), Expect = 0.030
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 65 NFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNG 108
NFA+ G MFS C + R D NS++SG +TGG R G
Sbjct: 128 NFAIVGAMFSCTWCLIESYRGTSDLKNSVISGCITGGAYWFRAG 171
>X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein.
Length = 2767
Score = 29.5 bits (63), Expect = 6.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 41 PLGFSRKMLGSLAAVKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTG 100
P+GF ++ GSLA V P G + G FS C + ++ E +G
Sbjct: 1476 PVGFYQEQAGSLACV----PCPVGRTTISAGAFSQTHC-VTDCQRNEAGLQCDQNGQYRA 1530
Query: 101 GILAARNGKEQCT-GNGRKCTYW 122
+GK C G GR+ +W
Sbjct: 1531 SQKDRGSGKAFCVDGEGRRLPWW 1553
>U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein.
Length = 2768
Score = 29.5 bits (63), Expect = 6.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 41 PLGFSRKMLGSLAAVKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTG 100
P+GF ++ GSLA V P G + G FS C + ++ E +G
Sbjct: 1477 PVGFYQEQAGSLACV----PCPVGRTTISAGAFSQTHC-VTDCQRNEAGLQCDQNGQYRA 1531
Query: 101 GILAARNGKEQCT-GNGRKCTYW 122
+GK C G GR+ +W
Sbjct: 1532 SQKDRGSGKAFCVDGEGRRLPWW 1554
>AF105687-1|AAC95473.1| 421|Homo sapiens thyroglobulin protein.
Length = 421
Score = 29.5 bits (63), Expect = 6.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 41 PLGFSRKMLGSLAAVKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTG 100
P+GF ++ GSLA V P G + G FS C + ++ E +G
Sbjct: 332 PVGFYQEQAGSLACV----PCPVGRTTISAGAFSQTHC-VTDCQRNEAGLQCDQNGQYRA 386
Query: 101 GILAARNGKEQCT-GNGRKCTYW 122
+GK C G GR+ +W
Sbjct: 387 SQKDRGSGKAFCVDGEGRRLPWW 409
>AB209159-1|BAD92396.1| 1574|Homo sapiens Thyroglobulin precursor
variant protein.
Length = 1574
Score = 29.5 bits (63), Expect = 6.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 41 PLGFSRKMLGSLAAVKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTG 100
P+GF ++ GSLA V P G + G FS C + ++ E +G
Sbjct: 283 PVGFYQEQAGSLACV----PCPVGRTTISAGAFSQTHC-VTDCQRNEAGLQCDQNGQYRA 337
Query: 101 GILAARNGKEQCT-GNGRKCTYW 122
+GK C G GR+ +W
Sbjct: 338 SQKDRGSGKAFCVDGEGRRLPWW 360
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.138 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,336,436
Number of Sequences: 224733
Number of extensions: 967490
Number of successful extensions: 913
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 886
Number of HSP's gapped (non-prelim): 19
length of query: 168
length of database: 73,234,838
effective HSP length: 85
effective length of query: 83
effective length of database: 54,132,533
effective search space: 4493000239
effective search space used: 4493000239
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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