GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002213-TA|BGIBMGA002213-PA|undefined
         (326 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   1.00 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   1.00 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.7  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    24   1.7  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 262 ASTIESLTREFQDSLELSQSKYGE 285
           A T+E++T+  +D  EL Q KY E
Sbjct: 99  AKTLENMTKIDKDLTELGQKKYLE 122


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 262 ASTIESLTREFQDSLELSQSKYGE 285
           A T+E++T+  +D  EL Q KY E
Sbjct: 99  AKTLENMTKIDKDLTELGQKKYLE 122


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 237  PGLDSLVVEPPPSSSANQSMALP 259
            P + S  V PPP  S  QS+  P
Sbjct: 1797 PSVHSSTVVPPPQHSTTQSLVDP 1819


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative
          cytochrome P450 monooxigenase protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 41 VQDKTKITNTDQTLPVGTS 59
          + ++ K+ + D TLPVGT+
Sbjct: 69 INEEVKLASGDYTLPVGTT 87


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.307    0.125    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,820
Number of Sequences: 317
Number of extensions: 2301
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 326
length of database: 114,650
effective HSP length: 57
effective length of query: 269
effective length of database: 96,581
effective search space: 25980289
effective search space used: 25980289
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 43 (21.4 bits)