Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002210-TA|BGIBMGA002210-PA|IPR006612|Zinc finger,
C2CH-type
(363 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34178| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41) 38 0.013
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 34 0.16
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 34 0.21
SB_24863| Best HMM Match : HemolysinCabind (HMM E-Value=1.6e-08) 33 0.36
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 33 0.48
SB_22175| Best HMM Match : HemolysinCabind (HMM E-Value=1.6e-08) 33 0.48
SB_18663| Best HMM Match : zf-C2H2 (HMM E-Value=4.5e-28) 32 0.64
SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65) 31 1.1
SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87) 31 1.5
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 31 1.9
SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11) 30 2.6
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_7923| Best HMM Match : Remorin_C (HMM E-Value=1.4) 30 3.4
SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 5.9
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 29 7.8
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 29 7.8
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 29 7.8
SB_16050| Best HMM Match : zf-RanBP (HMM E-Value=4.9) 29 7.8
SB_15678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05) 29 7.8
SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2) 29 7.8
SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
>SB_34178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 39.1 bits (87), Expect = 0.006
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 264 SPKAYRYLR--YLAPFPSIKTMQKLMTKIPVEPDLNTAVLD-YLKKLAPIKKIRAKLCSV 320
SP Y +L+ + PS +T+ E ++T+ L+ L +L IK A + +
Sbjct: 2 SPSTYSFLKSSQMVELPSERTLYDFSHWTDAETGISTSTLEKLLDELGEIKDWEANV-GI 60
Query: 321 VFNEIALKERLTYSEATDKVEGFIDYG 347
+ +E+ ++ L YS++T ++ GF + G
Sbjct: 61 IIDEMKIQSNLVYSKSTGQIVGFTNMG 87
>SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41)
Length = 901
Score = 37.9 bits (84), Expect = 0.013
Identities = 51/226 (22%), Positives = 89/226 (39%), Gaps = 9/226 (3%)
Query: 44 EDLAYLQVHMLHDLKHVCEVHFS-RRDFTKSKKRLKKRAVPKLNLTPPP-LRDEILFQFL 101
ED+ Y Q L ++H + S R+++ + +V ++ P L +E L Q +
Sbjct: 171 EDINYQQQSHLEVMEHSTDYPTSCRQEYMDTSGSYNDYSVEYQDMEQPESLPEEPLPQLV 230
Query: 102 QLNSQADVTPQGQFEVQAVPSDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXX 161
+ NSQ +PQ Q + + S P S SSL + Q VQ P
Sbjct: 231 EENSQEMYSPQPQESFEQLTS---PVQSPLGSSLHGVPPNSVPQSPVQRSPSAMSPPSLG 287
Query: 162 XXXXLEKNVTTRSQQK-ESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKL 220
+VTT+ +Q + S + ++ ++V +T R + + S K L
Sbjct: 288 TSQYKASSVTTQHRQSFTTGSSMLSQQTDNVKIT---RNVSDSQLYNMESYGSPLKGVSL 344
Query: 221 IDNLSSEFLKEIVTSALKNQKRKSQGKRWTIKNKISALAIFKRSPK 266
+ E ++ L Q + Q KR ++ S +A R P+
Sbjct: 345 LPQYEPELPAQVQFPNLVAQLQSIQSKRPEVQASSSKVAKRARLPR 390
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 34.3 bits (75), Expect = 0.16
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 175 QQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKK-SAKLIDNLSSEFLKEIV 233
++++ E Q R+++L+D++ K ++ L+KT +LK S + IDN++++ +
Sbjct: 562 ERRQREIQRRRQELQDIEKRQAMDK-IAALKKTTVGAKALKDLSPEEIDNMNADDIIAKQ 620
Query: 234 TSALKNQKRKSQGKRWTIKNKISALA 259
L +KR+ Q K T + K+ A
Sbjct: 621 VEQLDKEKRELQTKLKTQEKKVDYFA 646
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 33.9 bits (74), Expect = 0.21
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 181 SQIRKRKLEDVDVTPRKRKLLSELRKTKC-TLASLKKSAKLIDNLSSEFLKEIVTSALKN 239
S+I + + E +DV +++ +SE+RK + +KKS +L++ E + I+
Sbjct: 224 SKITRERDELMDVLTKQKSSVSEVRKRELDAYTQVKKSCELVEQAQLEKAQAIIQVQQLK 283
Query: 240 QKRKSQGKR 248
++ K QG+R
Sbjct: 284 EELKKQGER 292
>SB_24863| Best HMM Match : HemolysinCabind (HMM E-Value=1.6e-08)
Length = 302
Score = 33.1 bits (72), Expect = 0.36
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 181 SQIRKRKL-EDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALKN 239
S+++K + ED+D+ RKRK+L+E+ + K A DN S+++ E+
Sbjct: 137 SKVKKSGMGEDLDLGVRKRKMLNEILDDTKAVHKRKSPASKTDNGSAKYSVEMAILGFNA 196
Query: 240 QKRKSQGKRWTIKNKISALAIFKRS 264
+ K Q + + +F+R+
Sbjct: 197 KDEKMQNNKGCNACDLRFRLVFQRA 221
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 32.7 bits (71), Expect = 0.48
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 167 EKNVTTRSQQKESES-QIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLS 225
E + +R Q++ E + +LE V K KL +E RK K ASL++S KL D+L
Sbjct: 477 EDEINSRRHQQQCEVVEALVNRLEVVSELAEKFKLSAE-RKVKELTASLQESHKLQDSLD 535
Query: 226 SEFLKEIVTSALKNQKRKSQ 245
E L++ + A+ Q+R +
Sbjct: 536 LE-LEQARSQAVCYQQRNEE 554
>SB_22175| Best HMM Match : HemolysinCabind (HMM E-Value=1.6e-08)
Length = 298
Score = 32.7 bits (71), Expect = 0.48
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 181 SQIRKRKL-EDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALKN 239
S+++K + ED+D+ RKRK+L+E+ + K A DN S+++ E+
Sbjct: 118 SKVKKSGMGEDLDLGVRKRKMLNEILDDTKAVHKRKSPASKTDNGSAKYSVEMAILGFNA 177
Query: 240 QKRKSQGKR 248
+ K Q +
Sbjct: 178 KDEKMQNNK 186
>SB_18663| Best HMM Match : zf-C2H2 (HMM E-Value=4.5e-28)
Length = 693
Score = 32.3 bits (70), Expect = 0.64
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 7 TCEVCGIKERHLNEKRFFARFPLDVNRCKEWVKIVGKEDL-AYLQVHMLHDLK-HVCEV- 63
+CE+CG K +LN K + +V I+ + + +L H D + CE+
Sbjct: 279 SCEICGKKFSYLNNKNEHMNIHTGAKPYR-YVYIINSQTIQVHLITHKDKDERGQTCELC 337
Query: 64 ---HFSRRDFTKSKKRLKKRAVPKLNLTPPPLRDE 95
SRR + K+R KR V + P P +++
Sbjct: 338 GKRLLSRRGIKEHKQRCVKRTVDRATAPPKPEKEK 372
>SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65)
Length = 290
Score = 31.5 bits (68), Expect = 1.1
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 171 TTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLK 230
+++ + KE S+ KR+ + DV + L + +KTK T +A + D + SE +
Sbjct: 127 SSKGENKEKNSKKAKRETREADVCELEVNGLLKEKKTKST-----DAADVRDQIESEQSE 181
Query: 231 EIVTSALKNQKRKSQGKRWTIKNKISALAIFKRSPKAYRYLR 272
E V S K +K K + K I + + P Y +R
Sbjct: 182 EFVKSK-KKKKNKQKEKNKVILAVLVYSNALRAKPGPYVLIR 222
>SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87)
Length = 344
Score = 31.1 bits (67), Expect = 1.5
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Query: 118 QAVPSDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKNVTTRSQQK 177
Q S ++P S + +++++ +V LE + + +
Sbjct: 88 QKPESQNLPNGESSRAQIDRLEDEKDSLILQVSVLTDQVEAQGEKMRDLEFTLEEQKIRA 147
Query: 178 ES-ESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKE 231
E E Q+ K KL K+ LLSE+ + + + ++ + DNL+S KE
Sbjct: 148 EDLEQQLEKEKLRVSQSAKEKQNLLSEIETLRIPMNNSSRNTENGDNLTSHAYKE 202
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 30.7 bits (66), Expect = 1.9
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 112 QGQFEVQAVPSDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKNVT 171
Q E+ P+ P+S+ HS LE+ D+ + + + +
Sbjct: 95 QSLAELLEHPTKKDPSSTENHSLLEEKDIPRDKKSDKELKEEKKEKEKERMKKEEKHKEK 154
Query: 172 TRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTK 208
TR ++KE E + K K E+ + + K K E +++K
Sbjct: 155 TRKEEKEREKEKEKTKKEEKE-SREKEKTKKEEKESK 190
>SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11)
Length = 1500
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 176 QKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLA----SLKKSAKLIDNLSSEFLKE 231
Q E KL+D TP+K E+ K + T+A SLK+ ++ + L E+
Sbjct: 310 QSSREKDEMLMKLQDSFRTPKKAPNTPEVNKMRRTIADLEESLKRKSESLRKLEEEYQAN 369
Query: 232 IVTSALKNQKRKSQGKRWTIKNKISAL-AIFKRSPKAYRYLR 272
+ S + + +S+ K +++++ A+ K++ R LR
Sbjct: 370 MKNSQNEVENMESKMKIENLEHELQTKDALLKQTQVTVRNLR 411
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 29.9 bits (64), Expect = 3.4
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 3/126 (2%)
Query: 178 ESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSAL 237
++E +IRK ++ + L+SE+ K+ S + +D LS++ +
Sbjct: 798 KTEDEIRKAEMCKFEQAQEAEDLISEVLKSYAPTLPTYSSDRSLDLLSNDRSPAMTPEKA 857
Query: 238 KNQKRKSQGKRWT---IKNKISALAIFKRSPKAYRYLRYLAPFPSIKTMQKLMTKIPVEP 294
K +KS+ + T + +S KR+P A + P IK T++ +
Sbjct: 858 KFTSKKSEDVKHTPPKEEKDVSFHTFGKRAPPAVTVKKEATPKEEIKEFNDSKTELKKDM 917
Query: 295 DLNTAV 300
L+ V
Sbjct: 918 ALSLNV 923
>SB_7923| Best HMM Match : Remorin_C (HMM E-Value=1.4)
Length = 201
Score = 29.9 bits (64), Expect = 3.4
Identities = 39/194 (20%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Query: 166 LEKNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLS 225
+ +++ ++ + R LE++ + ++++L + K + +KK+ + + L
Sbjct: 4 INRDINDLQERLRTSVTRRTEALEEISIEDQQQQLETRRADLKAVVHVVKKARERLKELE 63
Query: 226 SEFLKEIVTSALKNQKRKSQGKRWTI--KNKISALAIFKRSPKAYRYLRYLAPFPSIKTM 283
S E+ A K K +++ + W + ++++ A+ RS + R L + M
Sbjct: 64 S----EVSHVAKKKTKAQTKLEEWKVIERSRLEAIQEDARSLEKIANKRSLLVKKKDECM 119
Query: 284 QKL--MTKIP---VEPDLNTAVLDYLKKLAPIKKIRAKLCSVVFNEIALKERLTYSEATD 338
+K+ + +P + TA+ KKL + K V N+ AL + + +SE +
Sbjct: 120 KKIRELGSLPSDAFDKFQKTALKTLWKKLHHCNEELKKYSHV--NKKALDQFINFSEQKE 177
Query: 339 KV---EGFIDYGYE 349
K+ + +D GYE
Sbjct: 178 KLMKRKDELDKGYE 191
>SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 270 YLRYLAPFPSIKTMQKLMTKIPVEPDLNTAVLDYLKKLAPIKKIRAK 316
Y YL PS+ L++ I V PD A DY LA + I K
Sbjct: 29 YALYLEYRPSVSASDSLLSTIGVYPDSPYAKQDYCASLAVLSSINNK 75
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 29.5 bits (63), Expect = 4.5
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 166 LEKNVTTRSQQKESESQIRKRKLEDVDVTPRKRK-----LLSELRKTKCTLASLKKSAKL 220
L+ + + ++E E KR L+++ P++ + LLSE+ K LAS ++ +
Sbjct: 58 LKSSFEKKIAEQEEEISALKRSLKEMVARPKRGESEEASLLSEIATMKSELASCREIVRE 117
Query: 221 IDNLSSEFLKEIVT--SALKNQKRKSQGKR 248
+ +E L ++ T S L +++R+ + R
Sbjct: 118 AQSTENELLSKMNTYRSMLADKEREIESLR 147
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 29.5 bits (63), Expect = 4.5
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 13/192 (6%)
Query: 166 LEKNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLS 225
+++NVT Q+ + + R + ++ R + + +L K KC S+ K AK +N
Sbjct: 68 IKRNVTNMVQEISGHASEKNRTI--TNMCSRNKAIFEDL-KNKCEKVSIDKDAKEKENKD 124
Query: 226 SEFLKEIVTSALKNQKRKSQGKRWTIKNKISAL--AIFKRSPKAYRYL--RYLAPFPSIK 281
+ LK KR+ G +K K + L + +++ + R L + K
Sbjct: 125 LQSKLNTANDDLKVAKRRC-GNVEELKEKSTLLEREVNQQNKEIERILSENKVTLADLSK 183
Query: 282 TMQKLMTKIPVEPDLNTAVLDYLKKLAPIKKIRAKLCSVVFNEIALKERLTYSEATDKVE 341
T + LM K DL + LK+ K+ + +L V+ + KE SE +++
Sbjct: 184 TQENLMKKAKELEDLQQKL---LKQEDTAKQDKRRLQEVILTK--EKELFKLSEEYKELQ 238
Query: 342 GFIDYGYERKNE 353
I + K E
Sbjct: 239 AKITVLSDSKTE 250
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/82 (24%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 177 KESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSA 236
K+ E+Q++ + + D+ + +L EL+++K ++ +++ A L +++ L+E V S
Sbjct: 251 KKCEAQLQNSQKQRDDLKRQLERLREELKRSKDSMNEVRRDA-LEQKKAADRLREEVGSK 309
Query: 237 LKNQKRKSQGKRWTIKNKISAL 258
K Q R + K +++++ AL
Sbjct: 310 DK-QVRNYERKNSDLEDQVEAL 330
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 166 LEKNVT-TRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNL 224
L K V T+ + +E++ +++ K E + + + E+++TK + KK +
Sbjct: 1289 LSKEVNETKKEVQETKKDVQETKKEVDETKTKVDETKKEVQETKKDVQETKKEVQETKTK 1348
Query: 225 SSEFLKEIVTSALKNQKRKSQGKRWTIKNKISALAI 260
E KE+ + + Q+ K +K K+S +A+
Sbjct: 1349 VDETNKEVQETKKEIQETKKDVHE--VKGKVSEMAV 1382
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 167 EKNVTTRSQQKESESQIRK------RKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKL 220
EK+ + QQKE E ++RK R+LE + + ++++ E +K K L++ K
Sbjct: 952 EKSKQLQLQQKEEEDRLRKKIMKEQRELEKM-LQQKEKERQVERQKQKQLQEQLQEQEKA 1010
Query: 221 IDNLSSEFLKEIVTSALKNQKRKSQGKRWTIKNKI 255
+ +E+ Q K + K +TIK+++
Sbjct: 1011 LRERLQRQQEELEEIEKVKQLEKEREKTFTIKSEV 1045
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 28.7 bits (61), Expect = 7.8
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 110 TPQGQFEVQAVPSDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKN 169
TP + +A S S SS +S + F ++ E
Sbjct: 67 TPNSESTPKAQSSKSRRTSSRISTSCSTRSNSYYSDFSSESKSSKKEVYEKALSPWEEWL 126
Query: 170 VTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFL 229
V ++Q+E + +IR+++ ++ + ++RKL + +K +K + ID + E L
Sbjct: 127 VRKTAEQREKQMRIREKRRKEKEEFEKQRKLKEDKQK-----EIEEKINEWIDKKNKEIL 181
Query: 230 KEIVTSALKNQKRKSQGK 247
K TS+ K Q++K K
Sbjct: 182 KS-KTSSQKLQEQKQAEK 198
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 166 LEKNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLS 225
LE+ + ++++ + ++R+ E + K+K E K K K+ + + L
Sbjct: 313 LEQKAKKKEKERQEREKEKEREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLE 372
Query: 226 SEFLKEIVTSALKNQKRK 243
E KE+ L+ QK +
Sbjct: 373 KEKQKELERKELQRQKER 390
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 28.7 bits (61), Expect = 7.8
Identities = 37/191 (19%), Positives = 71/191 (37%), Gaps = 9/191 (4%)
Query: 73 SKKRLKKRAVPKLNLTPPPLRDEILFQFLQLNSQADVTPQGQF-EVQAVPSDSMPASSSQ 131
S K K + +TP D VTP+ +A+P S A++S+
Sbjct: 1911 SAKVTSKTSTDAAKVTPKASTDAAKVTPKASTDAVKVTPKASIGAAKAIPKASTDAANSR 1970
Query: 132 HSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKNVTTRSQQKESESQIR-KRKLED 190
++ + ++P+ E + V S + + ++ R+ +
Sbjct: 1971 TTAAKTKSISPKVSSESTQLKSKSSMDVSQNKSLNVSTVEVYSMSESAIETVKGDRQSNE 2030
Query: 191 V-----DVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALKNQKRKSQ 245
+ V+ +++S + KT T SLK S ++ + ++S +K KSQ
Sbjct: 2031 LIKSSKSVSKDNARVISSVEKTSKT--SLKSSINIMVSNKGPKHNSEMSSTTSVEKTKSQ 2088
Query: 246 GKRWTIKNKIS 256
KR K+S
Sbjct: 2089 SKRSLEATKVS 2099
>SB_16050| Best HMM Match : zf-RanBP (HMM E-Value=4.9)
Length = 520
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 245 QGKRWTIKNKISALAIFKRSPKAYRYLRYLA 275
Q +RW I S L+++++ ++RY RY A
Sbjct: 490 QRQRWEISGASSLLSVYRKEIPSWRYARYEA 520
>SB_15678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 183 IRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALKNQKR 242
IR R + ++ K+K + L TK T + KKS+ D SE T L N+
Sbjct: 92 IRLRHAQLAEIVDDKKKRIKGLSSTKKTKRTKKKSSLAWDRTRSEEQNGNHTYGLPNRYG 151
Query: 243 KSQGKRWTIKN 253
++ R +KN
Sbjct: 152 STRLLRKAVKN 162
>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
Length = 493
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 173 RSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDN 223
R+ +K+ +++K ++ D+ K+K+ + LRK LKK+ + +D+
Sbjct: 435 RATKKKMPEELQKEIVQGTDLKKTKKKIATPLRKAIQEGVQLKKTMRKMDS 485
>SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2)
Length = 1037
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 167 EKNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLID 222
+ + +++ ES+ I+K+K E + KR + SE+ T TL S + ++++
Sbjct: 289 KSDAAEKTRASESKDSIKKKKSEQIVTENTKRDMDSEIPGTPATLDSSFEGPQILN 344
>SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 28.7 bits (61), Expect = 7.8
Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 115 FEVQAVPSDSMPASSSQHSSLE--KMDVTP-QGQFEVQAVPXXXXXXXXXXXXXLEKNVT 171
F + P ++ S+H+SLE ++VT +G E L+ +
Sbjct: 130 FPLADAPGEATGGLKSEHNSLEIPSVNVTKYEGTHETTGNLNAEEKYHKNNENVLDASEL 189
Query: 172 TRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKE 231
T +QK++E+ + K TP+K K T K++A+ D + K+
Sbjct: 190 TEREQKQTENDQLEDKTTQTTETPQKPKQHDVAETNVNTRRRKKENARFKDEATGSSRKQ 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,334,566
Number of Sequences: 59808
Number of extensions: 441630
Number of successful extensions: 1445
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1422
Number of HSP's gapped (non-prelim): 40
length of query: 363
length of database: 16,821,457
effective HSP length: 83
effective length of query: 280
effective length of database: 11,857,393
effective search space: 3320070040
effective search space used: 3320070040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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