Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002210-TA|BGIBMGA002210-PA|IPR006612|Zinc finger,
C2CH-type
(363 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 40 0.004
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 40 0.004
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 35 0.079
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 35 0.079
AL117200-8|CAB55060.1| 183|Caenorhabditis elegans Hypothetical ... 34 0.18
Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical p... 33 0.32
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 32 0.73
Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical pr... 31 0.97
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z72517-6|CAA96696.3| 261|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 3.0
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 5.2
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 5.2
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 6.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z69634-3|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 29 6.8
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 29 6.8
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 29 6.8
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 28 9.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 9.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 9.0
AF003132-3|AAB54135.1| 419|Caenorhabditis elegans Hypothetical ... 28 9.0
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division cycle
related protein14, isoform b protein.
Length = 1063
Score = 39.5 bits (88), Expect = 0.004
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 20 EKRFFARFPLDVNRCKEWVKIVGKEDLAYLQVHMLHDLKHVCEVHFSRRDFTKSKKRLKK 79
EKR+ + P R WV I+G++ L+ + ++C HF + DF+ S+ RL K
Sbjct: 962 EKRYMTQVPKTEQRIARWVAILGEQFRIRLR---MKPANYMCRKHFPQADFS-SRGRLLK 1017
Query: 80 RAVPKL 85
AVP +
Sbjct: 1018 TAVPNV 1023
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosphatase
isoform B protein.
Length = 1063
Score = 39.5 bits (88), Expect = 0.004
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 20 EKRFFARFPLDVNRCKEWVKIVGKEDLAYLQVHMLHDLKHVCEVHFSRRDFTKSKKRLKK 79
EKR+ + P R WV I+G++ L+ + ++C HF + DF+ S+ RL K
Sbjct: 962 EKRYMTQVPKTEQRIARWVAILGEQFRIRLR---MKPANYMCRKHFPQADFS-SRGRLLK 1017
Query: 80 RAVPKL 85
AVP +
Sbjct: 1018 TAVPNV 1023
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.079
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 177 KESESQIRKRKLEDVDVTPRK-RKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTS 235
K+ + ++K +++++T K ++LL + +K T K K +L + +
Sbjct: 51 KKKKKVVKKEIKQELELTDEKLQELLEKYEASKATATKTKDDFK---HLPKSQRGKALKR 107
Query: 236 ALKNQKRKSQGKRWTIKNKISALAIFKRSPKAYRYLR 272
AL+ KR QG+R I++++ A K PK +R
Sbjct: 108 ALRKDKRARQGERAQIRDELGESAPQKEVPKTIESMR 144
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.079
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 166 LEKNVTTRSQQKESESQIRKRK----LEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLI 221
+ K T + +K E++++K+K ++ D +K + KT S KKSAK
Sbjct: 321 MRKRETMKRAEKMKEAELKKKKESSKSKEEDKNKKKEVKIKSAPKTSAK-KSAKKSAKKE 379
Query: 222 DNLSSEFLKEIVTSALKNQKRKS 244
S + +KE+ A K++K KS
Sbjct: 380 QKKSEKKVKEVPEKAQKSKKEKS 402
>AL117200-8|CAB55060.1| 183|Caenorhabditis elegans Hypothetical
protein Y50E8A.12 protein.
Length = 183
Score = 33.9 bits (74), Expect = 0.18
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 6 RTCEVCGIKERHLNEKRFFARFPLDVNRCKEWVKIVGKEDLAY---LQVHMLHDLKHVCE 62
RTC VCG + + F R P ++ ++WV ++ D + L+ + K++C
Sbjct: 18 RTCVVCGSSTLN-SYVTSFTRVP---DKQEQWVTVLANGDAGFEDQLKASLATGRKYICY 73
Query: 63 VHFSRRDFTKSKKRLKKRAVPKLNLTPPPLRDEILFQFLQLNSQADVTPQGQFEVQAVPS 122
HF R+ F + K + N P ++ + + L S + P E + +P+
Sbjct: 74 DHFDRQYFAQRKTDDGFELI--RNRNPMAFKNATFIRHVDLRSTSSFVPDDSSE-EPIPA 130
Query: 123 DSMPASS 129
+ S
Sbjct: 131 KRLKIMS 137
>Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical
protein T04A8.15 protein.
Length = 718
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 179 SESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALK 238
S++ ++ ++ + D RKRK + LA K +++ L S F+ E + ++K
Sbjct: 142 SKNNVKFARIAEDDEENRKRKRPRSFAVVE--LAPKKCQCEVLTTLHSRFIDEFHSKSIK 199
Query: 239 NQKRKSQG 246
NQK++ +G
Sbjct: 200 NQKKREEG 207
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 31.9 bits (69), Expect = 0.73
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 171 TTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLK 230
+TRS+ + ES + + ++ + R KL ++L+K + LA K+ ++++ + K
Sbjct: 79 STRSELENEESLLEESSAKEEEYLQRIAKLEADLKKKEQELAEKKEE---LESIEKKHSK 135
Query: 231 EIVT-SALKNQKRK 243
EI + +AL++++RK
Sbjct: 136 EIDSGAALEDERRK 149
>Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical
protein C17D12.7 protein.
Length = 657
Score = 31.5 bits (68), Expect = 0.97
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 168 KNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSE 227
K +S++K+ S I+K + + K ++ SE K KC A L K L
Sbjct: 58 KKSEKKSKKKKIPSPIKKTNDTKLSILSEKSEIRSEKHKNKCKSADLDAMEKNFKELLEN 117
Query: 228 FLKEIVTSALKNQKR 242
F K +AL N R
Sbjct: 118 FSK---NAALSNSLR 129
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.7
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 173 RSQQKESESQIRKRKLEDVDVTPRKRK---LLSELRKTKCTL-------ASL--KKSAKL 220
R+ QK +S I+KR + P+K LSE +KT+C++ ASL + A++
Sbjct: 125 RNPQKLQQSTIKKRPKPETTSGPKKASKPTSLSEPKKTECSISEDELLSASLAERVQAEV 184
Query: 221 IDNLSSEFLKEIVTSALKNQKRKSQGKR 248
+N E L E + + Q++ S+ KR
Sbjct: 185 SENEQIENLTEWAQAYKQKQEKSSETKR 212
>Z72517-6|CAA96696.3| 261|Caenorhabditis elegans Hypothetical
protein T28F4.6 protein.
Length = 261
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/82 (24%), Positives = 32/82 (39%)
Query: 150 AVPXXXXXXXXXXXXXLEKNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKC 209
A+P K + E E+ I K K+ED DV + K L + +
Sbjct: 7 AIPPKKRRSVANDESIQNKRSKAADTRNEFENVIAKIKVEDKDVALKSAKKLKAMLPNET 66
Query: 210 TLASLKKSAKLIDNLSSEFLKE 231
+ S K +++L S F +E
Sbjct: 67 KIGSFVSHKKNLEDLVSVFSRE 88
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 172 TRSQQKESESQIRKRKLEDVDVTPRKRK-----LLSELRKTKCTLASLKKSAKLIDNLSS 226
++ + K +E + RKRK +DV V P K+K + E K K K S+ L D L+
Sbjct: 1217 SKDKVKTTEKKERKRKADDVPVGPEKKKRHTNNVPQEGEKKKKEKKEEKNSSSLKDQLAL 1276
Query: 227 EFL-KEIVTSALKNQKRK 243
+ K + AL++ K
Sbjct: 1277 LSIDKSLYGGALEDSSAK 1294
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 179 SESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSALK 238
+E + RK+K E+ + RK K L E++K K LKK + + + K + +
Sbjct: 1005 TEEEKRKKKQEEEEEKKRKEKEL-EMKKNKEEEEKLKKDIEAKSLAAGKEDKSALRKSAL 1063
Query: 239 NQKRKSQGKRWTIKNKISA 257
N K + K+ K++A
Sbjct: 1064 NMKDEDAKKKVATDEKVAA 1082
>U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical
protein M02F4.1 protein.
Length = 399
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 116 EVQAVPSDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKNVTTRSQ 175
EVQ PS S + SS+E++ + + +A+ LE++ + S+
Sbjct: 89 EVQLAPSTHHIGSQVRGSSMEEVLTSDEKDLLSKAINNLPKSPKSKSDRDLERSAESGSK 148
Query: 176 QKESESQIRKRKLEDVDVTPRKR 198
++S + R+ ++ED DV K+
Sbjct: 149 TRDSRLR-RRHEVEDDDVVEEKK 170
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 177 KESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSA 236
++SE + + K D+ KRK EL+ + TL L KS +N E+ T
Sbjct: 1048 EDSEQTMEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRKETELHTLG 1107
Query: 237 LK 238
+K
Sbjct: 1108 MK 1109
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 177 KESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSA 236
++SE + + K D+ KRK EL+ + TL L KS +N E+ T
Sbjct: 1048 EDSEQTMEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRKETELHTLG 1107
Query: 237 LK 238
+K
Sbjct: 1108 MK 1109
>Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 176 QKESESQIRKRKLEDVDVT---PRKRKLLSELRKTKCTLASLKKSAKLIDNLSSE 227
+K SE + R+RK +D DVT + +KLL E + + L ++K + ID+L +
Sbjct: 465 EKISEEK-RRRKKQDADVTRLDEQNQKLLREAQDSAELLEEVQKGKREIDHLRQQ 518
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 176 QKESESQIRKRKLEDVDVT---PRKRKLLSELRKTKCTLASLKKSAKLIDNLSSE 227
+K SE + R+RK +D DVT + +KLL E + + L ++K + ID+L +
Sbjct: 465 EKISEEK-RRRKKQDADVTRLDEQNQKLLREAQDSAELLEEVQKGKREIDHLRQQ 518
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 177 KESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLKEIVTSA 236
++SE + + K D+ KRK EL+ + TL L KS +N E+ T
Sbjct: 1048 EDSEQTMEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRKETELHTLG 1107
Query: 237 LK 238
+K
Sbjct: 1108 MK 1109
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 28.7 bits (61), Expect = 6.8
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 168 KNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSE 227
K+++ S K E + R + V + R RK L + T C S KK K S+
Sbjct: 1007 KSLSIESLTKVPEKEKGNRFVRKVATSFRLRKSLLD---TTCDGESDKKENK--KKTSTT 1061
Query: 228 FLKEIVTSALKNQKRKS--QGKRWTIKNKISALAIFKRSPKAYRYLRYLAPFPSIKTMQK 285
E ++S L+ +S Q R K K+ + ++ + K L +L PS KT +K
Sbjct: 1062 TSPEQISSFLEKMATRSLPQSPRTDRKAKLYS-SLNSTTEKVSNVLSWL---PS-KTSKK 1116
Query: 286 LMTKIPVEPDLNTAVLDY 303
LM DL+T++++Y
Sbjct: 1117 LMKNKSATHDLSTSLINY 1134
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 28.7 bits (61), Expect = 6.8
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 168 KNVTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSE 227
K+++ S K E + R + V + R RK L + T C S KK K S+
Sbjct: 1007 KSLSIESLTKVPEKEKGNRFVRKVATSFRLRKSLLD---TTCDGESDKKENK--KKTSTT 1061
Query: 228 FLKEIVTSALKNQKRKS--QGKRWTIKNKISALAIFKRSPKAYRYLRYLAPFPSIKTMQK 285
E ++S L+ +S Q R K K+ + ++ + K L +L PS KT +K
Sbjct: 1062 TSPEQISSFLEKMATRSLPQSPRTDRKAKLYS-SLNSTTEKVSNVLSWL---PS-KTSKK 1116
Query: 286 LMTKIPVEPDLNTAVLDY 303
LM DL+T++++Y
Sbjct: 1117 LMKNKSATHDLSTSLINY 1134
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical protein
C45G3.1 protein.
Length = 1186
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 278 PSIKTMQKLMTKIPVEPDLNTAVLDYLKKLAP 309
P + ++KL TKIP E N+ +L +LK L+P
Sbjct: 1084 PLLNVLEKLFTKIP-EEVTNSHILPHLKILSP 1114
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/124 (19%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Query: 167 EKNVTTRSQQKESESQIRKRKLEDVD----VTPRKRKLLSELRKTKCTLASLKK-SAKLI 221
EK + E+E K++ +D + + + E++ +K A KK A+L+
Sbjct: 106 EKEEANPGKSDETEEPAPKKQKDDAKFDQFLEAKGVVVEKEVKLSKDKSAEAKKLMAELM 165
Query: 222 DNLSSEFLKEIVTSALKNQKRKSQGKRWTIKNKISALAIFKRSPKAYRYLRYLAPFPSIK 281
D + + ++ S L + + K W ++ A+ I + A ++ + P +
Sbjct: 166 DGIGGDTSLSLIFSGLPSSAKGKNIKEWLNPIRVKAMKIARNEDVAAAFVTFNRPPDVRR 225
Query: 282 TMQK 285
+QK
Sbjct: 226 ALQK 229
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 6.8
Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 122 SDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKNVTTRSQQKESES 181
SDSM + K+D G F+VQ EKN T + E +
Sbjct: 728 SDSMASLKKLDLKKGKIDDNSDGAFKVQLKKVVKKEVKESTISVKEKNGTESGIKTEFKM 787
Query: 182 QIRKR----KLEDVDVTPRKRKLLSELRKTKCTLASLKKSA-----------KLIDNLSS 226
+ R+R K E D K++ + +K S KS+ ++ + +S
Sbjct: 788 EKRERTTLQKYEKTDSDGSKKE--DKPKKVSIAPVSTNKSSDDEPSTPRHHKEVEEKSTS 845
Query: 227 EFLKEIVTSALKNQKRKSQGKRWTIKNKISALAIFKRSPKAY 268
E LK V QKR K KN +S + + K + KA+
Sbjct: 846 EELKAKVAGRQVGQKRNGAQKPEEPKNLLSQIQLKKVTKKAH 887
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 6.8
Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 122 SDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKNVTTRSQQKESES 181
SDSM + K+D G F+VQ EKN T + E +
Sbjct: 728 SDSMASLKKLDLKKGKIDDNSDGAFKVQLKKVVKKEVKESTISVKEKNGTESGIKTEFKM 787
Query: 182 QIRKR----KLEDVDVTPRKRKLLSELRKTKCTLASLKKSA-----------KLIDNLSS 226
+ R+R K E D K++ + +K S KS+ ++ + +S
Sbjct: 788 EKRERTTLQKYEKTDSDGSKKE--DKPKKVSIAPVSTNKSSDDEPSTPRHHKEVEEKSTS 845
Query: 227 EFLKEIVTSALKNQKRKSQGKRWTIKNKISALAIFKRSPKAY 268
E LK V QKR K KN +S + + K + KA+
Sbjct: 846 EELKAKVAGRQVGQKRNGAQKPEEPKNLLSQIQLKKVTKKAH 887
>Z69634-3|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3 protein.
Length = 591
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 171 TTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFLK 230
+T Q+ ESE + RK KL+ + ++ RK +S A + + KL+D SE L
Sbjct: 535 STTPQKSESERENRKDKLKLLRISELVRKFMSN--------AKILEDMKLVDLEESEELA 586
Query: 231 EIVTS 235
+V+S
Sbjct: 587 NLVSS 591
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 170 VTTRSQQKESESQIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAKLIDNLSSEFL 229
+T R + E + + +L ++ P + +L S L+K L S K +LSS+F+
Sbjct: 136 LTQRIEDLEKKLAEKDERLNYLEQLPNQNELCSMLQKEILKLRSSPARDKKSQSLSSQFM 195
Query: 230 KE 231
K+
Sbjct: 196 KQ 197
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 4 THRTCEVCGIKERHLNEKRFFARFPLDVNRCKEWVKIVG 42
TH+ C VC R + FP D++R + W ++G
Sbjct: 162 THKPCTVCN---RVMKSGEMHLNFPADLDRRRIWANLLG 197
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 4 THRTCEVCGIKERHLNEKRFFARFPLDVNRCKEWVKIVG 42
TH+ C VC R + FP D++R + W ++G
Sbjct: 162 THKPCTVCN---RVMKSGEMHLNFPADLDRRRIWANLLG 197
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 9.0
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 5/142 (3%)
Query: 65 FSRRDFTKSKKRLKKRA-VP----KLNLTPPPLRDEILFQFLQLNSQADVTPQGQFEVQA 119
FS++ K++K K ++ VP K N P + + + ++ + TP+ + E
Sbjct: 184 FSKKTEKKTEKTEKSQSPVPQDQEKKNRKRPMIEVDESEELIKATKPKEKTPEKKPEKLI 243
Query: 120 VPSDSMPASSSQHSSLEKMDVTPQGQFEVQAVPXXXXXXXXXXXXXLEKNVTTRSQQKES 179
+ DS SS+ S+EK P + V E+ V ++K++
Sbjct: 244 ISQDSDEFPSSREQSVEKEKSPPAKRKRVNDENKKAKKRLIVPDSDDEEQVPMEVEEKKT 303
Query: 180 ESQIRKRKLEDVDVTPRKRKLL 201
E++ ED T R K++
Sbjct: 304 ETKTNSSLPEDRRRTTRIEKVV 325
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 167 EKNVTTRSQQKESES---QIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAK 219
E + Q+ ESE+ Q + E VD P+K+ L + K+ +++ KSAK
Sbjct: 13606 EAKKSAEKQKLESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSKSAK 13661
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 167 EKNVTTRSQQKESES---QIRKRKLEDVDVTPRKRKLLSELRKTKCTLASLKKSAK 219
E + Q+ ESE+ Q + E VD P+K+ L + K+ +++ KSAK
Sbjct: 13606 EAKKSAEKQKLESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSKSAK 13661
>AF003132-3|AAB54135.1| 419|Caenorhabditis elegans Hypothetical
protein F37E3.3 protein.
Length = 419
Score = 28.3 bits (60), Expect = 9.0
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 293 EPDLNTAVLDYLKKLAPIKKI--RAKLCSVVFNEIALKERLTYSEATDKVEGFIDYGYER 350
E + ++ D+LK + R KLCS ++ R KV+ F GY+
Sbjct: 227 ENQVGCSLKDFLKNFDTHLDLAQRIKLCSAAVRILSELHRFDIYHGASKVDNFYVLGYKN 286
Query: 351 KNELANHALVF 361
+ + N+ LVF
Sbjct: 287 EKTM-NYELVF 296
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,545,620
Number of Sequences: 27539
Number of extensions: 347707
Number of successful extensions: 1273
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 45
length of query: 363
length of database: 12,573,161
effective HSP length: 82
effective length of query: 281
effective length of database: 10,314,963
effective search space: 2898504603
effective search space used: 2898504603
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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