Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002209-TA|BGIBMGA002209-PA|IPR005225|Small GTP-binding
protein domain, IPR001806|Ras GTPase, IPR013753|Ras, IPR003579|Ras
small GTPase, Rab type, IPR002078|Sigma-54 factor, interaction region
(213 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 249 2e-66
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 188 4e-48
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 2e-43
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 161 4e-40
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 157 8e-39
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 8e-38
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 151 6e-37
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 8e-35
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 142 3e-34
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 140 1e-33
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 136 2e-32
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 135 3e-32
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 135 3e-32
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 131 4e-31
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 130 1e-30
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 126 1e-29
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 121 5e-28
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 9e-28
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 111 4e-25
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 7e-25
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 109 2e-24
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 101 4e-22
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 101 4e-22
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 101 6e-22
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 101 6e-22
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 99 1e-21
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 90 1e-18
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 88 4e-18
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 83 1e-16
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 82 4e-16
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 81 5e-16
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 81 9e-16
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 81 9e-16
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 79 3e-15
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 75 6e-14
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 71 5e-13
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 66 2e-11
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 66 3e-11
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 62 3e-10
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 61 8e-10
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 60 1e-09
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 59 2e-09
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 56 2e-08
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 56 3e-08
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 56 3e-08
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 54 7e-08
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 53 2e-07
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 53 2e-07
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 52 4e-07
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 52 5e-07
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 52 5e-07
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 50 1e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 50 2e-06
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 48 6e-06
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 48 6e-06
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 48 8e-06
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 46 2e-05
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 46 3e-05
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 45 4e-05
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 44 7e-05
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 44 9e-05
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 44 9e-05
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 43 2e-04
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 42 5e-04
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 42 5e-04
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 41 7e-04
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 41 9e-04
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 40 0.002
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 39 0.004
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 38 0.005
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 38 0.006
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 36 0.019
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 36 0.033
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 36 0.033
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 34 0.077
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 32 0.41
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 31 0.54
SB_54473| Best HMM Match : DLIC (HMM E-Value=0) 31 0.72
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 31 0.72
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.72
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 0.95
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 31 0.95
SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 31 0.95
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 29 2.2
SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42) 29 2.2
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08) 29 2.9
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 29 2.9
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 28 5.0
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_48723| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_47891| Best HMM Match : RVT_1 (HMM E-Value=1.3e-09) 28 6.7
SB_34554| Best HMM Match : RVT_1 (HMM E-Value=0.2) 28 6.7
SB_23509| Best HMM Match : XET_C (HMM E-Value=3.6) 28 6.7
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 28 6.7
SB_43286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_2750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_2226| Best HMM Match : RVT_1 (HMM E-Value=4.6e-09) 28 6.7
SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8) 27 8.8
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 27 8.8
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 249 bits (609), Expect = 2e-66
Identities = 112/155 (72%), Positives = 140/155 (90%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 63
R D YDYL+K+VLIGDSGVGKSSLLSRFTRNEF++ESKSTIGVEFATRSI+V+GK IKAQ
Sbjct: 5 RYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 123
+WDTAGQERYRAITSAYYRGAVGA+LVYD+ K ++++VERWL E+R+HAD I++MLVG
Sbjct: 65 VWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVG 124
Query: 124 NKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDS 158
NK DL+HLR++ +++AK + + +GL+FIE SALD+
Sbjct: 125 NKCDLKHLRAVASDDAKKYGDEHGLAFIEASALDA 159
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 188 bits (457), Expect = 4e-48
Identities = 97/206 (47%), Positives = 133/206 (64%), Gaps = 3/206 (1%)
Query: 7 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 66
EYDYLFK++LIGDSGVGKSSLL RF + F+ STIGV+F R++ VDGKTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWD 63
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKS 126
TAGQER+R +T+AYYR A G +L+YD+ + ++ ++ +WL E+ ++A + + +LVGNK
Sbjct: 64 TAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKC 123
Query: 127 DLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPE 186
DL R + AK FAE +SFIETSA DSTNVE F+ + E+ + + P
Sbjct: 124 DLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKLGS-PLTSPTA 182
Query: 187 GDVIRPDAEPADVRPSQADSVRRQCC 212
G+ DA P + + +CC
Sbjct: 183 GN--STDACPLKLSDGVSVEQSHKCC 206
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 172 bits (419), Expect = 2e-43
Identities = 94/187 (50%), Positives = 125/187 (66%), Gaps = 21/187 (11%)
Query: 7 EYDYLFKVVLIGDSGVGKSSLLSRFT--------------------RNEFNLESK-STIG 45
EYDYLFK++LIGDSGVGKS LL RF +++ ES STIG
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIG 63
Query: 46 VEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERW 105
V+F R+IE+DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ S+ NV++W
Sbjct: 64 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 123
Query: 106 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 165
L+E+ +A +N+ +LVGNK DL + + AK +AE+ G+ F+ETSA ++TNVE AF
Sbjct: 124 LQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAF 183
Query: 166 QNILTEI 172
+ EI
Sbjct: 184 MTMAAEI 190
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 161 bits (391), Expect = 4e-40
Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 2/168 (1%)
Query: 7 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIW 65
+Y Y F+++LIGDS VGKSSLL +FT +F S T+GV+F R +E+ G IK QIW
Sbjct: 9 KYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIW 68
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQ-NILIMLVGN 124
DTAGQER+R+IT +YYR VG L++YDI S+ NV W +E + ++ ++ MLVG+
Sbjct: 69 DTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGH 128
Query: 125 KSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEI 172
K D R + TEE + FAEA+ + FIETSA N+E AF ++ E+
Sbjct: 129 KIDKESKRVVSTEEGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 157 bits (380), Expect = 8e-39
Identities = 73/154 (47%), Positives = 106/154 (68%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHL 131
RY ++ YYRGA A++VYDI ++ + W++EL+ A NI+I L GNK+DL
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASK 141
Query: 132 RSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 165
R + E+A+++AE NGL F+ETSA + NV F
Sbjct: 142 RMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIF 175
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 153 bits (372), Expect = 8e-38
Identities = 74/195 (37%), Positives = 115/195 (58%), Gaps = 1/195 (0%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
M +D Y FKV+++GD GVGK+SL+ RFT+ F S ST+GV+ TR +++ G +
Sbjct: 1 MKENDDNCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIM 120
K Q WDTAGQE++R IT +YYR A +LV+DI ++ ++ +WL ++ + ++NIL +
Sbjct: 61 KLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKV 120
Query: 121 LVGNKSDLRHL-RSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQR 179
LVGNK+DL+ R + T A AE L ++ETSA NVE + ++ R
Sbjct: 121 LVGNKTDLKGASRKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAELAEQLRENAKNR 180
Query: 180 QMRDPPEGDVIRPDA 194
+ ++ P+A
Sbjct: 181 VFEESDNNKIVSPNA 195
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 151 bits (365), Expect = 6e-37
Identities = 70/171 (40%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
Query: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
DY+FKV+++GD VGKSSL+ RF +EFN + +TIGV+F ++DGK +K Q+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSD 127
G+E+YRA++ +++RGA GALLV+D++ S++++ + WL E + + + +LVGNK D
Sbjct: 68 GEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD 127
Query: 128 LRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 178
+ + + E+ + + LS++ETSA D+TNV AF+ + ++ + Q
Sbjct: 128 KKD-KKVSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKLVENLEQ 177
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 143 bits (347), Expect = 8e-35
Identities = 61/135 (45%), Positives = 93/135 (68%)
Query: 6 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
D+Y YLFK++L+GD+ VGK+ L+ +FT+ F TIGV+F ++++VDG+ +K QIW
Sbjct: 2 DDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 125
DTAGQER+R+IT +YY A G ++ YDI S+E++ +WL + + +++LI +VGNK
Sbjct: 62 DTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNK 121
Query: 126 SDLRHLRSIPTEEAK 140
SDL R + AK
Sbjct: 122 SDLSTNRKVDFHHAK 136
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 142 bits (343), Expect = 3e-34
Identities = 67/127 (52%), Positives = 88/127 (69%)
Query: 39 ESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLS 98
+S TIGVEF ++ + V GK++K QIWDTAGQER+R++T +YYRGA GALLVYDI+ +
Sbjct: 123 DSSHTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRET 182
Query: 99 YENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDS 158
+ ++ WL + R A NI+I+LVGNK DL R + EA FA+ N L F+ETSAL
Sbjct: 183 FNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQENELMFLETSALTG 242
Query: 159 TNVEPAF 165
NVE F
Sbjct: 243 ENVEEGF 249
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 140 bits (338), Expect = 1e-33
Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 6/136 (4%)
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 129
QERYRAITSAYYRGA+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GNKSDL+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 130 HLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQR------QMRD 183
HLR I K FA +G+ F+ETSALDSTNV AF+ I I+ V Q Q +
Sbjct: 62 HLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEKSGQAHE 121
Query: 184 PPEGDVIRPDAEPADV 199
P G+ I AE A++
Sbjct: 122 KPNGESIVIKAELAEL 137
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 140 bits (338), Expect = 1e-33
Identities = 65/161 (40%), Positives = 103/161 (63%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
K+V +GD GVGKSSL RF + F + + TIG++F T+++ +D ++ QIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLR 132
+R + +Y R + AL+V+DI + S+E+V W++ +RD + +I++VGNK D R
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRR 284
Query: 133 SIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIY 173
+ + A+ AE GLS++ETSA NV+ F + ++Y
Sbjct: 285 KVSYDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSKDLY 325
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 136 bits (328), Expect = 2e-32
Identities = 66/169 (39%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 62
TR + +FKVV IGDSGVGKSS L RF +++ +TIGV+F +++ V+G+ I
Sbjct: 888 TRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAI 947
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLV 122
Q+WDTAGQER+R+IT Y+R A G L+ YD+ S+ N+++W+ + + A++ + M++
Sbjct: 948 QLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVL 1007
Query: 123 GNKSDL---RHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNI 168
GNK+DL R + T + K A ++ETSA N++ A +
Sbjct: 1008 GNKTDLAEDEESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAMYKL 1056
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 135 bits (326), Expect = 3e-32
Identities = 63/67 (94%), Positives = 67/67 (100%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
MGT++DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI+VDGKTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDT 67
KAQIWDT
Sbjct: 61 KAQIWDT 67
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 135 bits (326), Expect = 3e-32
Identities = 66/160 (41%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Query: 11 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
+FK+VL GD+ VGKSS + R RN F+ ST+GV+F +++ VDGKT Q+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 130
ER+R+I +Y+R A G LL+YD+ S+ +V W+ + + + + IML GNK D+R
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQ 561
Query: 131 LRS------IPTEEAKAFAEANGLSFIETSALDSTNVEPA 164
+ I E A+ +G FIETS+ ++ N+ A
Sbjct: 562 SAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEA 601
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 131 bits (317), Expect = 4e-31
Identities = 60/131 (45%), Positives = 87/131 (66%)
Query: 57 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN 116
GK IK QIWDTAGQER+ IT+AYYRGA+G +LVYD+ S+ N+ +WL+++ DHA+++
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 117 ILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIV 176
+ MLVGNK D+ R I + + A + G+SFIETSAL + NVE +F + +I V
Sbjct: 62 VKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILNAV 121
Query: 177 SQRQMRDPPEG 187
+ + +G
Sbjct: 122 CPPTVEETEKG 132
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 130 bits (313), Expect = 1e-30
Identities = 58/65 (89%), Positives = 64/65 (98%)
Query: 80 YYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEA 139
YYRGAVGALLVYDIAKHL+YENVERWL+ELRDHAD NI+IMLVGNKSDLRHLR++PT+EA
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 140 KAFAE 144
KAFAE
Sbjct: 62 KAFAE 66
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 129 bits (311), Expect = 2e-30
Identities = 75/203 (36%), Positives = 115/203 (56%), Gaps = 13/203 (6%)
Query: 16 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
L D GVGKSSL++RF +F+ +S TIGVEF + +++DG++ QIWDTAGQER+++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 76 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDLRHL 131
+ + +YRG+ LLVY + S+ N+ W +E +AD N +L+GNK D+
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG- 334
Query: 132 RSIPTEEAKAFAEAN-GLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVI 190
R++ EEA ++ N G+ + ETSA DSTNV AF + + R+ S Q + G
Sbjct: 335 RAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAF---IAAVKRLNSLEQNKANRSGFTA 391
Query: 191 RPDAEPADVRPSQADSVRRQCCQ 213
A+V+ + CC+
Sbjct: 392 TGGVNLANVKKDKGSG----CCE 410
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 126 bits (304), Expect = 1e-29
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLES-KSTIGV-EFATRSIEVDGKTI 60
+R+ +DY FK ++IG+SGVGKS L+++ F+L+ ST+ + + D K I
Sbjct: 342 SRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKI 401
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERW--LRELRDHADQNIL 118
K I DTAGQERY +I AY+RG G LV+DI +++ + RW L AD NI
Sbjct: 402 KLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQ 461
Query: 119 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNIL 169
++LVGNK D+ R++ AK FA NG +IETSA D ++ F+ +L
Sbjct: 462 LILVGNKKDMEDNRAVTYSRAKEFAAMNGFPYIETSAKDVDSLMDMFKKML 512
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 123 bits (296), Expect = 1e-28
Identities = 56/116 (48%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
K++++G+SGVGKSSLL RFT + F+ + +TIGV+F +++ V+G K IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSD 127
+R +T +YYRGA G +LVYD +++ +E WL E+ ++ ++I+ MLVGNK D
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKID 125
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 121 bits (291), Expect = 5e-28
Identities = 55/121 (45%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 42 STIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYEN 101
+TIGV+F R+I +DG+ +K QIWDTAGQER+R ITS YYRG G ++VYD+ ++ N
Sbjct: 8 TTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVN 67
Query: 102 VERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNV 161
V+RWL E+ + D +++ +LVGNK D + + T + + F E + ETSA ++ NV
Sbjct: 68 VKRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSAKENINV 126
Query: 162 E 162
E
Sbjct: 127 E 127
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 120 bits (289), Expect = 9e-28
Identities = 59/172 (34%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
FK+++IGDS VGK+ L R +F +++TIGV+F +S+E++G+ +K Q+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 72 RYR-AITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSDLR 129
R+R ++ YYR + +YDI + S+E + W+ E R HA ++ +L+GNK DL
Sbjct: 107 RFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLG 166
Query: 130 HLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM 181
R++ + A+ FA+++ + E S + +E LT ++++ + +
Sbjct: 167 LERTVSSNIARKFADSHNMPLWEISIKNDAELEQIEAIFLTLTHKLLKHKPL 218
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 111 bits (267), Expect = 4e-25
Identities = 47/99 (47%), Positives = 72/99 (72%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
+ +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ + K +K QI
Sbjct: 15 DQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQI 74
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVE 103
WDTAGQERYR IT+AYYRGA+G +L+YDI S++ V+
Sbjct: 75 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 110 bits (265), Expect = 7e-25
Identities = 48/64 (75%), Positives = 60/64 (93%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
ED YDYLFK+VLIGDSGVGKS+LLSR+T+NEF+L SK+TIGVE A R++E++GKT++AQI
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQI 71
Query: 65 WDTA 68
WDTA
Sbjct: 72 WDTA 75
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 109 bits (262), Expect = 2e-24
Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILI 119
+K QIWDTAGQER+R IT +YYR G ++ YDI K +++NV RW +++ +A +N +
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIK 154
Query: 120 MLVGNKSDLRHLRSIPTEEAKAFAEANG-LSFIETSALDSTNVEPAFQNILTEI 172
+LVGNK DL R + E+A A G L +ETSA D+TN+E AF + E+
Sbjct: 155 LLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLAREL 208
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 101 bits (242), Expect = 4e-22
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
W+ AGQER+R ITS+YYRGA G ++VYDI K SY N+ +WL E+ +A + + ++LVGN
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGN 432
Query: 125 KSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDP 184
K DL R + + A+ +A + + F+ETSA + NV+ AF + + + ++ + R
Sbjct: 433 KIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSRLLTKHIASNEAR-- 490
Query: 185 PEGDVIRPDAEPADV 199
+G VI + E +V
Sbjct: 491 RKGLVIGANGEILEV 505
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 101 bits (242), Expect = 4e-22
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 55 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD 114
V+ K K IWDTAGQER++++ YYR A A+LVYDI ++ ++ W+REL+ +
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGP 63
Query: 115 QNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILT 170
Q+I+I + GNK D R + ++A+ FA + F ETSAL S NV F+ + T
Sbjct: 64 QDIVIAVAGNKCDKADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEELYT 119
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 101 bits (241), Expect = 6e-22
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 11 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
LFKVVL+G++GVGK+SL R N F ++TIG++ ++ +++ K + +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 130
ER+R +T YYRGA +L++++ S + + W+ + D + L +LV NK DL
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHD-TDEFCPDALKVLVANKIDLD- 128
Query: 131 LRSIPTEEAKAFAEANGLSF-IETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDV 189
+ TE + FA ++ SA + A I + R +++ D +
Sbjct: 129 -EQVTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKALLR--ENKELEDDSHNES 185
Query: 190 IRPDAEPADVRPSQA-DSVRRQCC 212
+ D P A R CC
Sbjct: 186 SKSDTIGLGTTPDPAIRQWRSGCC 209
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 101 bits (241), Expect = 6e-22
Identities = 51/127 (40%), Positives = 73/127 (57%)
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 129
QERYRAITSAYYRGA+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GNKSDL+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 130 HLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDV 189
HLR I +E ++ P ++ + ++ +R +P +
Sbjct: 62 HLRMIENRRGSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRDWENPGVTQL 121
Query: 190 IRPDAEP 196
R A P
Sbjct: 122 NRLAAHP 128
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 99 bits (238), Expect = 1e-21
Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 11/116 (9%)
Query: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI-----------EVDG 57
++L K + +GDSGVGK+SLL ++T + FN TIG++F + + G
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRG 163
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHA 113
+ I Q+WDTAGQER+R++T+A++R A+G LLV+D+ S+ N+ WL +L+ HA
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 120 MLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEI 172
+L+GNK+DL R + EA+A A+ GL + ETSA NV + + +L ++
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQV 522
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 95.5 bits (227), Expect = 3e-20
Identities = 55/173 (31%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Query: 6 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE-VDGKTIKAQI 64
++Y FKV+++GD GK S + R+ N ++ K TIGV+FA ++I+ TI+ QI
Sbjct: 13 NQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQI 72
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLREL----RDHADQNILIM 120
W AGQER+ ++T YY+GA ++++D+ + + + +W ++L + H+ + + +
Sbjct: 73 WLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCI 132
Query: 121 LVGNKSDLRHLRSIPTEEA-KAFAEANGLSFIETSALDSTNVEPAFQNILTEI 172
LVGNKSDL R + E K E + L + E S + NV+ + ++ +
Sbjct: 133 LVGNKSDLPD-RPVDKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVKHL 184
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 91.1 bits (216), Expect = 6e-19
Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 15/163 (9%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
K+V++GD GVGKS+ L T N F E T+ +++ +I +DGK +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSS-NIMLDGKAYNVGLWDTAGQED 65
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHL 131
Y + Y L+ +DI S+EN+E +WL EL H + I LVGNK DLR
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKI-LVGNKRDLRSA 124
Query: 132 RS------------IPTEEAKAFAEANGLSFIETSALDSTNVE 162
+ I EE KA A+ G+ ++E S+L V+
Sbjct: 125 QQNTSLSNHRSRDPITYEEGKALAKRLGMQYLENSSLTQDGVK 167
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 89.8 bits (213), Expect = 1e-18
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 17 IGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAI 76
+GD G GK++ + R EF + +T+GVE IK +WDTAGQE++ +
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 77 TSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPT 136
YY A++++D+ ++Y+NV W R+L + +NI I+L GNK D++ R +
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDIKD-RKVKA 155
Query: 137 EEAKAFAEANGLSFIETSALDSTNVEPAF 165
+A F L + + SA + N E F
Sbjct: 156 -KAITFHRKKNLQYYDLSAKSNYNFEKPF 183
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 88.2 bits (209), Expect = 4e-18
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
+KVV++G GVGKS+L +F +F + TI +F + IEVD +I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRE-LRDHADQNILIMLVGNKSDLRH 130
++ ++ Y + G LLVY + ++ +++ + LR +N+ I+LVGNKSD+
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 122
Query: 131 LRSIPTEEAKAFAEAN 146
R + T AK F E N
Sbjct: 123 EREVSTSNAKTFLETN 138
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 83.4 bits (197), Expect = 1e-16
Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
M + + D +K+V++G GVGKS+L +F ++ F + TI + + + +D +
Sbjct: 1 MAREQKDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVA 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIM 120
I DTAGQE + A+ Y R G LLV+ + S+E + ++ ++ D+ M
Sbjct: 60 HLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPM 119
Query: 121 LV-GNKSDLRHLRSIPTEEAKAFA 143
++ GNKSDL + R++ T E + A
Sbjct: 120 IICGNKSDLEYERTVSTAEGQELA 143
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 81.8 bits (193), Expect = 4e-16
Identities = 34/101 (33%), Positives = 62/101 (61%)
Query: 84 AVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 143
A G +LVYDI + +++N+ +WLR + +HA++++ M++GNK D+ R + E + A
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIA 184
Query: 144 EANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDP 184
+G+ F+ETSA + N+E AFQ + +I + + +P
Sbjct: 185 REHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEP 225
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 44
YDYLFK++LIGDSGVGK+ +L RF+ + FN STI
Sbjct: 6 YDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 81.4 bits (192), Expect = 5e-16
Identities = 42/117 (35%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Query: 14 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 73
V+L+GDS GK++LL+ + RN+FN + ++T+ +T ++EVDG+ I+ +WDT+G E Y
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLST-AVEVDGERIELTLWDTSGHEDY 293
Query: 74 RAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 129
+ Y L+ +DI++ + +++ E+W+ E+ D N ++LVG K DLR
Sbjct: 294 DHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLC-PNKPVLLVGCKQDLR 349
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 80.6 bits (190), Expect = 9e-16
Identities = 42/110 (38%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD----QNILI 119
IWDTAGQER++++ A+YRGA +LV+D+ + S++ ++ W E A +N
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 120 MLVGNKSDLRHLRSIPTEEAKAFAEA-NGLSFIETSALDSTNVEPAFQNI 168
+++GNK DL + R++ + A+A+ + N + + ETSA ++ NVE AFQ I
Sbjct: 61 VVLGNKIDLEN-RAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTI 109
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 80.6 bits (190), Expect = 9e-16
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 53 IEVDGKTIKAQIWDTAGQERY-----RAITSAYYRGAVGALLVYDIAKHLSYENVERWLR 107
+E+ GKT+ I DT G+ R + YR GA++V+D+ S+E V WL
Sbjct: 10 LELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLD 69
Query: 108 ELRDHADQNILIMLVGNKSDLRHLRS--IPTEEAKAFAEANGLSFIETSALDSTNVEPAF 165
++++H I ++LVGNK+D R L S IP+ A +A NG +IETSAL N++ F
Sbjct: 70 KVQEHCGHEIPVVLVGNKTD-RPLNSWKIPSNVAAKYATNNGFLYIETSALGMCNIDEIF 128
Query: 166 QNIL 169
+L
Sbjct: 129 AILL 132
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
K+V++GD GK+ LL F++++F T+ + IEVDGK ++ +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 5989
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 129
Y + Y L+ + I S EN+ E+W E++ H N+ I+LVGNK DLR
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 6046
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 79.0 bits (186), Expect = 3e-15
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
+ +VL+G +GVGKS+LL RF F E T+ + + S +D I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDV-SATIDEDPATLHITDTAST- 185
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLSYENVE---RWLRELRDHADQNILIMLVGNKSDL 128
Y + Y G ++VY I + ++E + + +RE++ LI+L GNK DL
Sbjct: 186 -YEPV---YLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDL 241
Query: 129 RHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEI 172
+H R++ +EA+ FA + F ETSA ++ N + F + + +I
Sbjct: 242 KHCRAVSRQEAREFAAEHECVFHETSAANNINTKVIFHDCVRQI 285
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 79.0 bits (186), Expect = 3e-15
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 18/159 (11%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
+KVV++G GVGKS+L +F +F +E TI+ + TAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQF----------------VEKYDPTIE-DFYHTAGTE 46
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRE-LRDHADQNILIMLVGNKSDLRH 130
++ ++ Y + G LLVY + ++ +++ + LR +N+ I+LVGNKSD+
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 106
Query: 131 LRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNIL 169
R + EAK AEA G F ETSA +NV+ F ++
Sbjct: 107 EREVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEVV 145
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 74.5 bits (175), Expect = 6e-14
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Query: 45 GVEFATRSIEVDGKT-IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVE 103
GV S GK K I DTAGQE Y A+ Y R G L V+ + S+E++
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDIN 320
Query: 104 RWLRELRDHAD-QNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVE 162
++ +++ D + + ++LVGNK DL R++ T +A+ A++ + F ETSA V+
Sbjct: 321 QYREQIKRVKDAEEVPMVLVGNKCDLPQ-RTVSTSDAQELAKSYNIPFQETSAKTRQGVD 379
Query: 163 PAFQNILTEIYRIVSQRQM 181
AF ++ EI + V +M
Sbjct: 380 DAFYTLVREIRKDVHATEM 398
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 72.9 bits (171), Expect = 2e-13
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 9 DYL-FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
DY+ K+ ++GD VGK++L N F E T VDG +A ++D+
Sbjct: 3 DYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDS 62
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKS 126
AG E + + Y L+ +DIA S+ENV RWL EL DH + +LVGNK
Sbjct: 63 AGGEDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPEL-DHFSPGVPRVLVGNKK 121
Query: 127 DLR---------HLRSIPTEEAKAFAEANGLSFIETSALDSTNVE 162
DLR + + EE K A+ + +IE SAL + NV+
Sbjct: 122 DLRPKQDQEDSHSIDFVSYEEGKEAAQNFKMQYIENSALLNENVK 166
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 71.3 bits (167), Expect = 5e-13
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
KVVL GD+ VGK+S L T+NE LE T + +EV + +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNE--LEGTPTAFANYEL-GLEVGSQKFLLDLWDTEGTTE 64
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHL 131
Y + Y+G+ LL +DI+ ++E +E +WL E +I + L+GNK+D+R
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRV-LIGNKNDIRKT 123
Query: 132 R 132
R
Sbjct: 124 R 124
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 134 IPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRD 183
+ +EAK A+ L ++ETSAL ++ A + + Y S R RD
Sbjct: 260 VTAKEAKLLAKKYDLPYMETSALSRHAIQEALYACVKK-YSAASSRSKRD 308
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 85 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 144
+G LLVYDI S++++ +WL+ + D+A N+ +L+GNK D R I + ++ E
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 145 ANGLSFIETSALDSTNVEPAFQNILTEI 172
N L F E SA NV+ AF + +I
Sbjct: 63 DNNLEFYEASARTGENVQQAFMAVARKI 90
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 66.5 bits (155), Expect = 2e-11
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR-- 129
Y + Y L+ + + S+ENV E+W+ E+ H + +LVG + DLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQVDLRDD 122
Query: 130 ----------HLRSIPTEEAKAFA-EANGLSFIETSALDSTNVEPAFQNIL 169
+ I E A+ A E + ++E SAL ++ F +
Sbjct: 123 QGTIEKLSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFDEAI 173
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 66.1 bits (154), Expect = 2e-11
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Query: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE-VDGKTIKAQIWDT 67
D ++K+ L G GVGK+S+ +R + +EF E +S ++ + + K +K +WDT
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDT 65
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSD 127
G E Y ++T +Y + L+VY + S V+ + + +A I+LV NK D
Sbjct: 66 LGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPA-AKIVLVANKMD 124
Query: 128 LRHLRSIPTE 137
L + R + T+
Sbjct: 125 LPNYRRLETD 134
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 65.7 bits (153), Expect = 3e-11
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR--SIEVDGKTIKAQIWDTAGQ 70
K V++GD GVGK+SLL + + F S + F T ++EV+ K + DTAGQ
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGF---PNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQ 76
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 129
E + A+ Y A ++ + + S+ NV +W+ E+R+ I+LVG SDL+
Sbjct: 77 EDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREF-QPKAPIILVGTHSDLK 135
Query: 130 HLRSIPTEEAK------AFAEANGL-------SFIETSALDSTNVEPAFQNILTEIY 173
I TE ++ + +A GL ++ETS++ N++ F + Y
Sbjct: 136 DCYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVFDEAIISGY 192
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 65.7 bits (153), Expect = 3e-11
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 7 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 66
E D KVV +GD VGK+S L T + F ++I + ++++E+DGK + D
Sbjct: 5 ELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCD 63
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNK 125
T G R +++ A LL +DIA S+ N+E WL + + ++ +LVGNK
Sbjct: 64 TPGTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHV-NLETSDVPKVLVGNK 122
Query: 126 SDLRHLRS-----------IPTEEAKAFAEANGLSFIETSALDSTNVE 162
+LR + +P EAKA A + + ++E SA + +E
Sbjct: 123 MELRCSQQESTDLGQTHDCVPFTEAKALACKSNIPYVENSAKELKGLE 170
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 65.3 bits (152), Expect = 4e-11
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 12 FKVVLIGDSGVGKSSLLSRF-TRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
+KVVL+GD+GVGKS ++ R + +E S+ S + + DT+G
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTASNSCHLYLLDTSGL 73
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRD---HADQNILIMLVGNKSD 127
E YR +T Y + + + + S ++E+W + D +L ++G K D
Sbjct: 74 EEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVLKFVLGCKID 133
Query: 128 LRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM-RDPPE 186
+H I +A+ FA G TSA+ TNV F+ I ++ + VS ++ D +
Sbjct: 134 TQHEADI-QPKAEDFASRIGAELSITSAITGTNVNDFFERIADKLKQHVSSTEVWVDKTD 192
Query: 187 GDVIRPDAEPAD 198
V P++ D
Sbjct: 193 NFVAEPNSSLVD 204
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 62.1 bits (144), Expect = 3e-10
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 51 RSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLR--- 107
+ + + +++ I DTAG ++Y G ++VY I + SYE + ++
Sbjct: 6 KELRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSITDYYSYEMARQLVKLVT 60
Query: 108 ELRDHADQ-NILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQ 166
++R D I I+LVGNK DLR R + +EA+ FA G S ETSAL + NV F
Sbjct: 61 QVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHVIFY 120
Query: 167 NILTEI-YRIVSQRQMR 182
N+ + + S R+ R
Sbjct: 121 NMAFQTRFTKASNRETR 137
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD-----GKTIKAQIWDT 67
++ ++GDSGVGK+SL+ E + TIG + + GKT + WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLREL 109
G + S +Y G G +LV+D+ S+ N+ +WL E+
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 60.9 bits (141), Expect = 8e-10
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 11 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA--QIWDTA 68
+F+VV++G GVGK+SL+ RF F+ + T+G + +S+ + K A +I DTA
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTL-SKDFNAFLEIMDTA 164
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 128
G + A+ + A +LVY + + S + RE+ + + ++LVGNK+DL
Sbjct: 165 GSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
Query: 129 --RHLRSIPTEEAKA--FAEANGLSFIE--TSALDSTNVEPAFQNILTEIYRIVSQRQ 180
LR + + +A +S E TS L + + L ++ R+ QR+
Sbjct: 225 VSEELRQSTRAQMRKTNYAVCRFISHAEPVTSVLSANSQPIDLDANLADVCRLSPQRR 282
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 60.1 bits (139), Expect = 1e-09
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 1 MGTREDEY---------DYLFKVVLIGD-SGVGKSS-LLSRFTRNE-FNLESKSTIGVEF 48
MG R++EY D+ FK++ +GD +G GK LS + N + K TIGV+F
Sbjct: 31 MGNRDEEYYSKLKSRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDF 90
Query: 49 ATRSIE---VDGK---TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENV 102
IE D K T+K Q WD A ER+ +T+ Y R GAL+ + +
Sbjct: 91 YVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSA 150
Query: 103 ERWLRELRDHADQNILIMLV 122
+W ++++ ++ ++LV
Sbjct: 151 LKWSEKVKEANSGSVPMVLV 170
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
D+++++ L+GD GVGK++LL RF + F E TI ++ +SI +D T+ +I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILDTA 61
Query: 69 GQ-ERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNI 117
+ + + + R G ++VY A ++ N+ R+ ++ D N+
Sbjct: 62 SRGQNSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNL 111
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 117 ILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIV 176
I ++++GNKSDL R + +E + AE G F E SAL+ + +++ ++
Sbjct: 140 ISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLFAEASALEYEAADACIADLVRDMMAKR 199
Query: 177 SQRQMR 182
S R R
Sbjct: 200 SMRNHR 205
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 98 SYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALD 157
S++ +W+ ++R +++IMLVGNK+DL R + EE + A+ + FIETSA
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 158 STNVEPAFQNI 168
NV+ F+ +
Sbjct: 73 GYNVKQLFRRV 83
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 108 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 167
+++ ++ N ++LVGNK D+ R + + K A+ GL F ETSA D+TNV+ F+
Sbjct: 4 QVKTYSWANAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFER 63
Query: 168 ILTEIYRIVSQRQMRDPPEGDVIRPDAEPADVRPSQADSVRR 209
++ I +SQ DP +PD + V Q + +
Sbjct: 64 LVDIICDKMSQSLDTDPTIVSGQKPDMKYTPVHRHQQSNTHK 105
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 16 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
+IG GK+++L R E + + T+G T V K I +WD GQ++ RA
Sbjct: 1 MIGLDNAGKTTILYRLKLEEV-VSTVPTLGFNVET----VTYKNISFTVWDIGGQDKIRA 55
Query: 76 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDL 128
+ YY+G G + V D A E L +L + Q ++++++ NK D+
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDM 109
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 54.4 bits (125), Expect = 7e-08
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 76 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELR----DHADQNILIMLV-GNKSDLRH 130
+ + +Y+ GALLVYD+ S+E ++ WL E++ +D N ++ +V NK D R
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRK 65
Query: 131 LRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYR 174
R + E + +AE + + ETSA + FQ + T + +
Sbjct: 66 -RLVEESEGRQWAENHKFCYFETSAQTGDGIPEVFQTLFTGVVK 108
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 80 YYRGAVGALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEE 138
Y R G +++Y I S+ ++ ++ R +I I+LVGNK DL R + T+E
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQE 64
Query: 139 AKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQR 179
+ A F ETSA V+ AF ++ EI + QR
Sbjct: 65 GQELAHRFDCPFFETSACQRHFVDDAFHGLVREIRKKEKQR 105
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 125
DTAG+E+Y ++S Y RGA A++ YDI K S + + L A+ N L+++VG K
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCK 337
Query: 126 SDLRHLRSIPTEEAKAFAEANGL 148
DL T++ + EA G+
Sbjct: 338 KDL------VTDDTREITEAAGM 354
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 52.8 bits (121), Expect = 2e-07
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
F +V G S VGK+SL+ RF FN + TI +F + + + +T + QI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTI-EDFFIKHVFFNNETYELQIIDTSGTY 87
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL--- 128
+ A+ +LVY S+ + R+ E+ + ++V NK+DL
Sbjct: 88 EFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIVVCNKNDLPLA 147
Query: 129 RHLRSIPTE-----EAKAFAEANGLS-FIETSALDSTNVEPAFQNILTEIYR 174
HL + A+ + S +I+ SA +++ VE F ++ E+ R
Sbjct: 148 THLGVLTDHRGLRISAQHLVQTEWQSLWIDCSAKENSQVEDIFLRLMDEMKR 199
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 81 YRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 140
Y G +LVYDI S+E + W+R + +HA Q++ M++GNK D+ R + E +
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
++ L+G GK++ ++ +F+ + T+G F R + TIK +WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGNVTIK--VWDIGGQPR 77
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDL 128
+R++ Y RG + + D A H E + L L + I I+++GNK DL
Sbjct: 78 FRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDL 134
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 51.6 bits (118), Expect = 5e-07
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRN--EFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
KV++ GDS VGKS+L+ F + + T+G E + + + T +W+
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPETT--DSVWEHPNL 64
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHA--DQNILIMLVGNKSDL 128
++ YD++ S+ +WL R A D N+ L+ K+DL
Sbjct: 65 ----------------VIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDL 108
Query: 129 RHLRSIPTEEAKAFAEANGLSFIETSAL 156
+ R I T++ K +A + L + E SA+
Sbjct: 109 KQRRVISTKQGKDYANSKNLEYFECSAI 136
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
++V++G GK+++L + E + + TIG T K + IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKE-TVSTIPTIGFNVETLQ---PTKNVTLTIWDVGGQDK 76
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDL 128
R + Y++G G L V D + L + L + D + +++ +++V NK DL
Sbjct: 77 IRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDL 133
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
K+ ++G VGKSSL +F +F TI F T++I+ G+ ++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAGQDE 66
Query: 73 YRAITSAYYRGAVGALLVYDI 93
Y +Y G G +LVY +
Sbjct: 67 YSIFPQSYSMGIHGYILVYAV 87
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 48.0 bits (109), Expect = 6e-06
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
+K+ ++G GVGK+SLL F ++F+ + T+ ++ S+ +DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLREL------RDHADQNILIMLVGNK 125
+ + ++V+ I S+ + E+ + I++ LV NK
Sbjct: 72 AFPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANK 131
Query: 126 SDLRHLRSIPTEEAKAFAEANGLS-----FIETSALDSTNVEPAFQNILTEIYRIVSQRQ 180
D+ + T A+A AE + S ++E S++ + VE F +I+ I +++
Sbjct: 132 LDIDCRERVIT-AARAHAELSKRSWLTGEYMEISSMLNFRVERTFHSIVKLIVEDFEEKE 190
Query: 181 MR 182
+
Sbjct: 191 KK 192
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 76 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIP 135
+++A R G LLVYDI S++N++ WL +R + Q I+LVGNK D+ R +P
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVP 107
Query: 136 TEEAK 140
+ +
Sbjct: 108 KRKGE 112
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
+++++G GK+++L + E + + TIG F S+E K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 73 YRAITSAYYRGAVGALLVYDI-AKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHL 131
R + Y++ G + V D + E+ E + L++ ++ +++++ NK DL +
Sbjct: 74 IRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNA 133
Query: 132 RSI 134
S+
Sbjct: 134 LSV 136
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 11 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
+ KVV+IG+ GVGKS+L RF F E T+ + + EV G+ + ++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAIELTDTAGE 919
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENVER 104
+ G V +L Y I S++ R
Sbjct: 920 NSPAKLERCLEIGEVFVVL-YSITSRHSFDEASR 952
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN- 116
K I +WD GQ++ R + Y++GA G + V D A V L + H++ N
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNG 211
Query: 117 ILIMLVGNKSDL 128
+ +++V NK DL
Sbjct: 212 VPVVVVANKQDL 223
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 109 LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNI 168
++ + +Q +LVGNK L R + E + A+ GL F ETSA + NV F+ +
Sbjct: 1 MQHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEAL 60
Query: 169 LTEIYRIVSQRQMRDPPEGDVIRPD 193
+ I + Q+++ EG ++ D
Sbjct: 61 VDSILEEIKQKEIFKSIEGIMLPND 85
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 45.2 bits (102), Expect = 4e-05
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 11 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
+F++ ++G GVGKSS+ R+ +NEF I+ GK ++ DTAGQ
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTAGQ 2643
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWL-RELRDHADQN----ILIMLVGNK 125
E Y + + L+++ I S+ ++ + +R+H + N I +++VGNK
Sbjct: 2644 EEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVGNK 2703
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 44
T + +YLFKV++IGD GVGK+SL+ R+ F++ ++T+
Sbjct: 663 TAGERREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 73 YRAITS---AYYRGAVGALLVYDIAKHLSYENVERWLRELRDH----ADQNILIMLVGNK 125
YRA S YY+ AVGA +V+D+ + ++ V++W +L + + + I +L+ NK
Sbjct: 700 YRATVSFNIVYYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANK 759
Query: 126 SD--LRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEI 172
D L + + + A+ + + ETSA + NV A + ++++I
Sbjct: 760 CDQAKEGLVNNSAQMDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKI 808
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 24/79 (30%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 63
RE++ + KVV++G+ VGKSS++ +G+ I+
Sbjct: 2 REEDVEVAIKVVVVGNGAVGKSSMIQ------------------------SANGEDIRLM 37
Query: 64 IWDTAGQERYRAITSAYYR 82
+WDTAGQE + AIT AYYR
Sbjct: 38 LWDTAGQEEFDAITKAYYR 56
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 88 LLVYDIAKHLSYENVERWL-RELRDHADQNILIM-LVGNKSDLRHLRSIPTEEAKAFAEA 145
L++Y I S++ RW+ R ++DH + + + M +V K DL HLR + EE F+
Sbjct: 131 LVLYSIVDRSSFDEA-RWIARYVKDHRNTDSMSMVIVATKKDLDHLRRVDIEEGLGFSNE 189
Query: 146 NGLSFIETSALDSTN-VEPAFQNILTEIYR 174
+F E S + N V+ +L I R
Sbjct: 190 LDCTFYEVSISEGYNEVQELLHELLKRITR 219
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI-EVDGKTIKAQIWDTAGQE 71
+VV++G GVGKS+L RF F E T+ E R I ++D + + I DTAG+
Sbjct: 18 RVVVLGKDGVGKSALTVRFLTRRFIGEYDQTL--ESTHRHILQIDNEDVSLDISDTAGEV 75
Query: 72 RYR 74
R R
Sbjct: 76 RVR 78
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
+++++G GK+++L + E + + TIG T V+ K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGGQDK 73
Query: 73 YRAITSAYYRGAVGALLVYDI-AKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 128
R + Y++ G + V D + E E R L + ++ ++++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDL 130
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
+++++G GK+++L +E + + TIG V+ K IK +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV----VEYKNIKFTVWDIGGQDK 146
Query: 73 YRAITSAYYRGAVGALLVYDI-AKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 128
R + Y++ G + V D + E E + L++ + ++++ NK DL
Sbjct: 147 IRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDL 203
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 42.7 bits (96), Expect = 2e-04
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 13 KVVLIGDSGVGKSSLLSR-------------FTRNEFN--LESKSTIGVEFATRSIE--- 54
K+VL+GD+G+GKS+L+++ F F+ E K T ++T
Sbjct: 7 KLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYSNPT 66
Query: 55 -VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDH 112
V +A I DT G + Y A +L +D+ S+ENV +W E+R +
Sbjct: 67 GVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLY 126
Query: 113 ADQNILIMLVGNKSDLRHLRSIPTEEAKAF---AEANGLSF---------IETSALDSTN 160
++ + +MLVG K + R + +A+ + NG F E S L
Sbjct: 127 -EKKVPLMLVGLKPNPVEKRKVSKADAERMLTRVKENGSYFEVDSFNPKEDEASKLFEAA 185
Query: 161 VEPAFQNILTEIYRIVSQRQMRD--PPEGDVIRPDAEPADVRP 201
VE AFQ+ T R + R+ P D+ +EP + RP
Sbjct: 186 VEQAFQHRQTLSDRHLKNREKESSKDPSFDITNL-SEPINRRP 227
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 13 KVVLIGDSGVGKSSLLSR--FTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
++V++GDS VGK+ LL + + N + + +I + +I VDGK K ++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKLELCDV--- 75
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 129
+ S + L + + S+ +VE +W E++ + N I++VG K+DLR
Sbjct: 76 DNLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYAEVK-NCSPNSPIIVVGTKTDLR 134
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 121 LVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEI 172
L+GNK+DL R + EA+A A+ GL + ETSA NV + + +L ++
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQV 53
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 41.5 bits (93), Expect = 5e-04
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 71
F VV++G GK+S+L R N+F + F +I K I+ ++WD G+E
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFREYVNTVPTTAFNVETIR-PFKGIRFKVWDIGGRE 77
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVGNKSDLRH 130
+ R + AY R + V D E L L + A N I++ NK D +
Sbjct: 78 QNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQDCPN 137
Query: 131 LRSIPTEE 138
+IP E
Sbjct: 138 --AIPPRE 143
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 123
+WDT G E Y ++T +Y + L+VY + S V+ + + +A I+LV
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPA-AKIVLVA 61
Query: 124 NKSDLRHLRSIPTE 137
NK DL + R + T+
Sbjct: 62 NKMDLPNYRRLETD 75
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 40.7 bits (91), Expect = 9e-04
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEF--NLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
K+VL+G+SG GK+S E + T+GV +E DG ++ Q+ D AGQ
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAGQ 319
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHL----SYE-NVERWLRELRDHADQNILIMLVGNK 125
RY+ + LLV ++ + S+E N W++ + ++ +++++ ++
Sbjct: 320 RRYQLTHPFFLSEEALHLLVINLHSYKKTPESFERNAGDWIKWVTSRLEKPRIMVVLTHR 379
Query: 126 SDLR 129
+ R
Sbjct: 380 DECR 383
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72
+++++G G GKS LS ++ + + +T F + DG + IW+ G E+
Sbjct: 168 RILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDG--LNLNIWEIGGDEK 225
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVGNKSDLRHL 131
YRA + + V D + + L+ L ++ N + ++LV +K DL
Sbjct: 226 YRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGA 285
Query: 132 RSI 134
R +
Sbjct: 286 RQL 288
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 88 LLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 145
L++Y I S++ R R L R + +LI L+G K DL HLR I E AE
Sbjct: 3 LILYSIVDRTSFDEASRIARYLKWRKFPETGVLI-LIGTKRDLGHLREIDETEGSELAEE 61
Query: 146 NGLSFIETSA 155
F E SA
Sbjct: 62 LECPFYELSA 71
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 45
DYL KV+LIGDS VGK+ LL F E ++ T G
Sbjct: 10 DYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAG 46
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.3 bits (85), Expect = 0.005
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 28/183 (15%)
Query: 14 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 73
V ++G GVGKS+ R F E + + + S+E+DG+ + + DTAG+
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYK-HSMEIDGQYLALDVLDTAGKVSR 242
Query: 74 RAITSAYYRGAVGAL---------------------LVYDIAKHLSY---ENVERWLREL 109
A S + G L L+Y S+ E + +L E
Sbjct: 243 EARMSPRQKTKTGQLAPTGNSEEKLERASENTEIYFLLYSTTDKRSFTEAEEIAEYLFET 302
Query: 110 RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDS-TNVEPAFQNI 168
+ + D + L +V K DL H+R + E + A+ G +F + S + T QN
Sbjct: 303 K-NIDPSTL-TIVATKKDLVHMREVDEYEGRFLAQNYGCAFAQISISEHYTETVSTVQNA 360
Query: 169 LTE 171
+ E
Sbjct: 361 IKE 363
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 88 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANG 147
+L+Y I S+ V + + + +I+L+ NK DL H R + T E + A+A
Sbjct: 1063 VLIYSITSRESFHAVWNYYYHVVTSIEAKPVIVLLANKHDLGHKRKVLTTEGRQMAQAIK 1122
Query: 148 LSFIETSA 155
F E SA
Sbjct: 1123 CPFYEVSA 1130
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 45
+ LFKV+++GD+ VGK+S + R+ E K TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 37.9 bits (84), Expect = 0.006
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 13 KVVLIGDSGVGKSSLLSRF------TRNEFNLESKSTIGV-EFATRSIEVDGKTIKAQIW 65
K+ ++GD+ VGK+ +L R+ ++ + + KS V E + D W
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTYW 69
Query: 66 DTAGQERYRAITSA-----YYRGAVGALLVYDIAKHLSYENVER-WLRELRDHADQNILI 119
DT R + + YR ++ +DI S++NV W+ EL+ H +
Sbjct: 70 DTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELK-HYMPETPV 128
Query: 120 MLVGNKSDLR 129
++VGNK D+R
Sbjct: 129 LVVGNKKDMR 138
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 37.9 bits (84), Expect = 0.006
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 10 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD--GKTIKAQIWDT 67
Y K++L+G GK++L+ R + + +T G+ ++ D + +IWD
Sbjct: 550 YSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDF 609
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAK-HLSYENVERWLRELRDHADQNILIMLVGNKS 126
GQE Y A + +LV+++ + +E WL + A + L+ +VG
Sbjct: 610 GGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARAPGSSLV-IVGTHL 668
Query: 127 D 127
D
Sbjct: 669 D 669
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 36.3 bits (80), Expect = 0.019
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 10 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD------------- 56
Y K++++G G GK++LL+ + ST+G+ S+++
Sbjct: 665 YRMKLMVVGIQGYGKTTLLAALKGQPLP-SNLSTVGIVVDEWSVQISTSLLSRIGITSGI 723
Query: 57 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA-KHLSYENVERWLRELRDHADQ 115
G TI WD AGQ Y A + + L V++ EN+ WL ++ A
Sbjct: 724 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPY 783
Query: 116 NILIML 121
+ +I++
Sbjct: 784 SDVIII 789
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 35.5 bits (78), Expect = 0.033
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 76 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELR 110
+ + +Y+ GALLVYD+ S+E ++ WL E++
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIK 35
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/98 (21%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
+++ + L ++ + G +GVGK+S++ RF +F+ E + T+ + ++ + +G +
Sbjct: 2 KEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMVLNT 60
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENV 102
D++G ++ A+ + A G + + +S E V
Sbjct: 61 TDSSGSYQFPAMREVAIKRASGNKKDLEEQREVSSEQV 98
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 35.1 bits (77), Expect = 0.044
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 55 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVER-WLRELRDHA 113
+DG ++ ++WDT G + Y+ A +L + I S+++V W E++ +
Sbjct: 78 IDGVSVSLRLWDTFGDHSMNRRFA--YQNAHVIVLCFAINTPSSFKDVNAVWYPEIKKYC 135
Query: 114 DQNILIMLVGNKSDLR 129
+ + I+LVG KSD R
Sbjct: 136 PR-VPIILVGTKSDWR 150
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 34.3 bits (75), Expect = 0.077
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 55 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI-AKHLSYENVERWLRELRDHA 113
V+ K I +WD GQ++ R + Y++ G + V D + + E E R L +
Sbjct: 505 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDE 564
Query: 114 DQNILIMLVGNKS----DLRHLRSIPT 136
++ ++++ NK + R++ SI T
Sbjct: 565 LRDAVLLVFANKQLFCVETRYVSSIHT 591
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 10 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Y +++LIG GK+SL F+ + +ST G+E EVD + ++
Sbjct: 360 YRGRIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR 411
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 31.5 bits (68), Expect = 0.54
Identities = 25/125 (20%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD----GKTIKAQIWDTA 68
KV ++G G GK++L+ + ++N + + + E T+ +E+ ++++ +++D
Sbjct: 569 KVTIVGGEGAGKTTLV-KALGFKYNWKLSTVMDSEERTKGLEISNIDLNESLRMKVFDLG 627
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLS--YEN-------VERWLRELRDHADQNILI 119
G Y I + + V+D+A ++ Y N +E WL+ + A + ++
Sbjct: 628 GDSFYFDIHALFLSENSLYQAVFDMATYVKTPYSNAFYQLGTLEVWLQVIHSQAPNSHVV 687
Query: 120 MLVGN 124
++ N
Sbjct: 688 IVATN 692
>SB_54473| Best HMM Match : DLIC (HMM E-Value=0)
Length = 1401
Score = 31.1 bits (67), Expect = 0.72
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 14 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI---EVDGKTIKAQIWDTAGQ 70
++LIG+ GK++L+S+ E ++ SK G+E+ + E+D T + +W G
Sbjct: 865 IILIGNDESGKTTLISKLRGKEDDI-SKGH-GLEYTYLEVHDEEIDDYT-RLNVWILDGD 921
Query: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDH 112
R + A+T + R + ++V E++ W LR+H
Sbjct: 922 PRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREH 968
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 31.1 bits (67), Expect = 0.72
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 12 FKVVLIGDSGVGKSSLLSRF-------TRNEFNLES--KSTIGVEFATRSIEVDGKTIKA 62
F ++++G+SG+GKS+L+ R + E K T+ +E +T IE G ++
Sbjct: 25 FTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETSTVEIEERGVKLRL 84
Query: 63 QIWDTAG 69
+ DT G
Sbjct: 85 TVVDTPG 91
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 45
+VV++G GVGKS+L R F E ST+G
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
+K+ ++GD+ GK+SLL+ +++ +E + T+ E + ++ +WD++
Sbjct: 62 YKLSVVGDAESGKTSLLNALVKSD--IEVEETVIFEECVTDVTSGDSNLEFMLWDSS 116
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 45
+ +V++G +GVGK++L+ RF F E T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 30.7 bits (66), Expect = 0.95
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 53 IEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDH 112
+ V G+ I + DTAG+ + A A L+Y + S+E WL
Sbjct: 27 LTVHGQYIAMDVVDTAGKNTPDKV-DALLEAANIVYLLYSVTDRASFEEAA-WLAR---R 81
Query: 113 ADQNILIMLVGNKSDLRHLRSIPTEEAKAFA-EANGLSFIETS 154
QN I V DL+HL + E + A E +GL F++ S
Sbjct: 82 IQQNKAI--VATNKDLKHLSQVLEYEGRFLAQELDGL-FVQVS 121
>SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 41 KSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSY 99
K I S+ K +WD AGQ Y A ++ +L ++++K+L Y
Sbjct: 41 KRLIAQHLMDSSLSEKRKETVLDVWDFAGQHLYYATHPVFFSSRAVYVLTHNLSKNLGY 99
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
FK+ ++G S VGK+SL+ + F E TI ++ ++ DG + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 10 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
Y +++LIG GK+SL F+ ST G+E + EVD +K
Sbjct: 358 YRGRIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYE 100
IWD AGQ Y A + LLVY++ K L+ E
Sbjct: 558 IWDFAGQHLYYASHPVFLSPRAVYLLVYNLKKDLNAE 594
>SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKS----TIGVEFATRSIEVDGKTI---- 60
DY K++ IG G GK+S + NLE+++ G+ AT ++ +D +
Sbjct: 2 DY-HKLLFIGPVGAGKTSAIRALCDEHHNLETEAKASDITGLRKATTTVAMDYGCLTLSD 60
Query: 61 --KAQIWDTAGQERYR----AITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD 114
Q++ T GQ R+R + + G + + D ++ ++ + +E +
Sbjct: 61 GEAVQLYGTPGQARFRFMWDLLANNLAADCAGIVFLVDNTRNYPMRDLRYYAQEFAELIA 120
Query: 115 QNILIMLVGNKSDLR 129
+ +I+ V +SDLR
Sbjct: 121 RKRVIVGV-TRSDLR 134
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
+ E D +++L+G GK+++L + L T G F +S++ G + +
Sbjct: 11 KSEKDREMRILLLGLDNSGKTTILKSLASEDV-LHITPTQG--FNIKSVQSKGG-FRLNV 66
Query: 65 WDTAGQERYRAITSAYY 81
WD GQ + R Y+
Sbjct: 67 WDIGGQRKIRPYWKNYF 83
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 41 KSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYE 100
K I S+ K +WD AGQ Y A ++ +L ++++K+L+ E
Sbjct: 453 KRLIAQHLRDSSLSEKRKETVLDVWDFAGQHLYYATHPVFFSSRAVYVLTHNLSKNLN-E 511
Query: 101 NVERWLRE 108
E +R+
Sbjct: 512 RAEPCMRQ 519
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 10 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 56
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 289 YRGRIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVD 335
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 61
F V+++G+SG+GKS+LL+ + S E +++EV T++
Sbjct: 25 FTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSIKEKLNKTVEVKPCTVE 74
>SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42)
Length = 275
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKS--------TIGVEFATRSIEVDGKTIKAQ 63
F ++++G SG+GKS++++ + + + + + T+ V+ + IE G +K
Sbjct: 115 FNLMVVGASGLGKSTMVNTLFKGKLSRPTSTGKPTIIPKTVDVKSVSHVIEEKGVRLKLT 174
Query: 64 IWDTAG 69
I DT G
Sbjct: 175 ITDTPG 180
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 53
+G R Y + ++G+ VGKSSL+ F F E TI EF ++ +
Sbjct: 17 LGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHL 68
>SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08)
Length = 340
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 12 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD--GKTIKAQIWDTAG 69
FKV+++G +GVGKS L++ E+ +E + +T S G+T + +WD+ G
Sbjct: 61 FKVIVVGRTGVGKSHLVNTL-MGEYVVEEGQDLDPCTSTVSKHEKRIGRT-RVTVWDSPG 118
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 53 IEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWL-RELRD 111
I+ GK ++ D+AGQE Y + + L+++ I S+ ++ + +R+
Sbjct: 16 IDYCGKLYDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIRE 75
Query: 112 HADQN----ILIMLVGNK 125
H + N I +++VGNK
Sbjct: 76 HKESNTTCTIPMVIVGNK 93
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 10 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 56
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 80 YRGRIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVD 126
>SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 41 KSTIGVEF---ATRSIEVDGKTI-KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH 96
+ST GV V GK I + +W+ A + Y+RGA+G L +Y+ A +
Sbjct: 107 RSTFGVHLWLVVQEKPRVFGKVITRYWVWENAVTTKAVTHDGRYFRGAMGCLQIYNKALN 166
Query: 97 L 97
L
Sbjct: 167 L 167
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/59 (28%), Positives = 24/59 (40%)
Query: 152 ETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPADVRPSQADSVRRQ 210
ETS S + R S R R PP + IR D +V+ S + S +R+
Sbjct: 2046 ETSRYSSRSTRDTDDKSTRYSSRTSSNRDSRTPPADEKIRADINSNEVQSSPSPSTKRE 2104
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 13 KVVLIGDSGVGKSSLLSRFTRNEFN 37
KVVL+G GK+SL+ R+ + FN
Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFN 53
>SB_48723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 48 FATRSIEVDGKT---IKAQIWDTAGQE------------RYRAITSAYYRGAVGALLVYD 92
F++ S+ VD + +KA+IW E +Y+ SA GA+ AL V
Sbjct: 94 FSSPSLPVDARVSDKLKAKIWQNEFVEFGLLLANPILEGKYQLTLSASQNGAMPALNVEP 153
Query: 93 IAKHLSYENVERWL 106
++K Y ++E W+
Sbjct: 154 VSKTKKYLSIENWI 167
>SB_47891| Best HMM Match : RVT_1 (HMM E-Value=1.3e-09)
Length = 969
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 48 FATRSIEVDGKT---IKAQIWDTAGQE------------RYRAITSAYYRGAVGALLVYD 92
F++ S+ VD + +KA+IW E +Y+ SA GA+ AL V
Sbjct: 172 FSSPSLPVDARVSDKLKAKIWQNEFVEFGLLLANPILEGKYQLTLSASQNGAMPALNVEP 231
Query: 93 IAKHLSYENVERWL 106
++K Y ++E W+
Sbjct: 232 VSKTKKYLSIENWI 245
>SB_34554| Best HMM Match : RVT_1 (HMM E-Value=0.2)
Length = 671
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 48 FATRSIEVDGKT---IKAQIWDTAGQE------------RYRAITSAYYRGAVGALLVYD 92
F++ S+ VD + +KA+IW E +Y+ SA GA+ AL V
Sbjct: 63 FSSPSLPVDARVSDKLKAKIWQNEFVEFGLLLANPILEGKYQLTLSASQNGAMPALNVEP 122
Query: 93 IAKHLSYENVERWL 106
++K Y ++E W+
Sbjct: 123 VSKTKKYLSIENWI 136
>SB_23509| Best HMM Match : XET_C (HMM E-Value=3.6)
Length = 362
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 48 FATRSIEVDGKT---IKAQIWDTAGQE------------RYRAITSAYYRGAVGALLVYD 92
F++ S+ VD + +KA+IW E +Y+ SA GA+ AL V
Sbjct: 135 FSSPSLPVDARVSDKLKAKIWQNEFVEFGLLLANPILEGKYQLTLSASQNGAMPALNVEP 194
Query: 93 IAKHLSYENVERWL 106
++K Y ++E W+
Sbjct: 195 VSKTKKYLSIENWI 208
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 44 IGVEFATRSIE-VDGKTIKAQIWDTAGQERYRAITSAYY 81
+G++ A ++E V+ +++K IWD G ++ R + YY
Sbjct: 216 LGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_43286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 48 FATRSIEVDGKT---IKAQIWDTAGQE------------RYRAITSAYYRGAVGALLVYD 92
F++ S+ VD + +KA+IW E +Y+ SA GA+ AL V
Sbjct: 172 FSSPSLPVDARVSDKLKAKIWQNEFVEFGLLLANPILEGKYQLTLSASQNGAMPALNVEP 231
Query: 93 IAKHLSYENVERWL 106
++K Y ++E W+
Sbjct: 232 VSKTKKYLSIENWI 245
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/62 (27%), Positives = 25/62 (40%)
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIM 120
K IWD GQ R+ Y+ G + V D A + + L+ L ++LI
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEELYHVLIQ 62
Query: 121 LV 122
V
Sbjct: 63 AV 64
>SB_2750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 48 FATRSIEVDGKT---IKAQIWDTAGQE------------RYRAITSAYYRGAVGALLVYD 92
F++ S+ VD + +KA+IW E +Y+ SA GA+ AL V
Sbjct: 172 FSSPSLPVDARVSDKLKAKIWQNEFVEFGLLLANPILEGKYQLTLSASQNGAMPALNVEP 231
Query: 93 IAKHLSYENVERWL 106
++K Y ++E W+
Sbjct: 232 VSKTKKYLSIENWI 245
>SB_2226| Best HMM Match : RVT_1 (HMM E-Value=4.6e-09)
Length = 944
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 48 FATRSIEVDGKT---IKAQIWDTAGQE------------RYRAITSAYYRGAVGALLVYD 92
F++ S+ VD + +KA+IW E +Y+ SA GA+ AL V
Sbjct: 172 FSSPSLPVDARVSDKLKAKIWQNEFVEFGLLLANPILEGKYQLTLSASQNGAMPALNVEP 231
Query: 93 IAKHLSYENVERWL 106
++K Y ++E W+
Sbjct: 232 VSKTKKYLSIENWI 245
>SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8)
Length = 250
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 57 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA-KHLSYENVERWLRELR 110
G TI WD AGQ Y A + + L V++ EN+ WL ++
Sbjct: 3 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIK 57
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 11 LFKVVLIGDSGVGKSSLLSRFTRNEF 36
L+KVV G GVGK+SL R +F
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKF 52
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,576,402
Number of Sequences: 59808
Number of extensions: 236382
Number of successful extensions: 915
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 730
Number of HSP's gapped (non-prelim): 150
length of query: 213
length of database: 16,821,457
effective HSP length: 79
effective length of query: 134
effective length of database: 12,096,625
effective search space: 1620947750
effective search space used: 1620947750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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