GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002208-TA|BGIBMGA002208-PA|IPR002143|Ribosomal protein
L1
         (364 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         28   0.35 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         28   0.35 
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    25   3.3  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    25   3.3  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    25   3.3  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 129 HHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDSFTRLSLLPHP 170
           HHP    +P     A I F++T I   RF  +       PHP
Sbjct: 111 HHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHP 152


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 129 HHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDSFTRLSLLPHP 170
           HHP    +P     A I F++T I   RF  +       PHP
Sbjct: 111 HHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHP 152


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 167 LPHPFPREEERTILAFCKGAEL 188
           L + FP +EE   L FC G +L
Sbjct: 55  LAYEFPPDEETKCLIFCVGTDL 76


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 167 LPHPFPREEERTILAFCKGAEL 188
           L + FP +EE   L FC G +L
Sbjct: 55  LAYEFPPDEETKCLIFCVGTDL 76


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 239 MKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFGSVEVPVGRLNM 291
           ++K   N RSGT+D NL+  + K   G      +D A+  FG+    V R  +
Sbjct: 49  IRKPQANRRSGTVDQNLRSKILKTIKGNPNLSDRDLAR-KFGATHSTVRRTRL 100


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,820
Number of Sequences: 2123
Number of extensions: 12115
Number of successful extensions: 72
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 68
Number of HSP's gapped (non-prelim): 5
length of query: 364
length of database: 516,269
effective HSP length: 65
effective length of query: 299
effective length of database: 378,274
effective search space: 113103926
effective search space used: 113103926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)