Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002208-TA|BGIBMGA002208-PA|IPR002143|Ribosomal protein
L1
(364 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457191-1|CAG33472.1| 303|Homo sapiens MRPL1 protein. 90 1e-17
BC032595-1|AAH32595.1| 303|Homo sapiens mitochondrial ribosomal... 90 1e-17
BC014356-1|AAH14356.1| 303|Homo sapiens mitochondrial ribosomal... 90 1e-17
AB049474-1|BAB40180.1| 303|Homo sapiens mitochondrial ribosomal... 90 1e-17
BC015109-1|AAH15109.1| 303|Homo sapiens mitochondrial ribosomal... 90 1e-17
AK024791-1|BAB15005.1| 248|Homo sapiens protein ( Homo sapiens ... 88 5e-17
BC017765-1|AAH17765.1| 302|Homo sapiens Unknown (protein for IM... 87 9e-17
AC112225-1|AAY41057.1| 237|Homo sapiens unknown protein. 64 6e-10
BC128234-1|AAI28235.1| 234|Homo sapiens Unknown (protein for IM... 34 0.90
X60069-1|CAA42674.1| 569|Homo sapiens gamma-glutamyltranspeptid... 32 3.6
M24903-1|AAA52546.1| 569|Homo sapiens GGT1 protein. 32 3.6
M24087-1|AAA35899.1| 569|Homo sapiens gamma-glutamyl transpepti... 32 3.6
J04131-1|AAA52547.1| 569|Homo sapiens GGT1 protein. 32 3.6
CR456494-1|CAG30380.1| 569|Homo sapiens GGT1 protein. 32 3.6
BC065921-1|AAH65921.1| 239|Homo sapiens GGT1 protein protein. 32 3.6
BC025927-1|AAH25927.1| 569|Homo sapiens gamma-glutamyltransfera... 32 3.6
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 31 6.4
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 31 6.4
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 31 6.4
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 31 6.4
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 31 6.4
>CR457191-1|CAG33472.1| 303|Homo sapiens MRPL1 protein.
Length = 303
Score = 90.2 bits (214), Expect = 1e-17
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P DDVY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 117
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 118 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---D 173
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFG 280
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 174 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRHIPKMLELFKNGHEIKV--DEERENF- 230
Query: 281 SVEVPVGRLNMEPKQVAENIGKLLKDVQAVRPKRDGLFVTRCLLVSPPSTEQLMIDPFVF 340
++ + L+M Q+A N+ ++ +V RP G FV R L S S E L++
Sbjct: 231 -LQTKIATLDMSSDQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTS-EGLLLK---- 284
Query: 341 VDRTLSKEVQDDSDDEDE 358
+D L KEV+++ ++++
Sbjct: 285 IDPLLPKEVKNEESEKED 302
>BC032595-1|AAH32595.1| 303|Homo sapiens mitochondrial ribosomal
protein L1 protein.
Length = 303
Score = 90.2 bits (214), Expect = 1e-17
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P DDVY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 117
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 118 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---D 173
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFG 280
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 174 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV--DEERENF- 230
Query: 281 SVEVPVGRLNMEPKQVAENIGKLLKDVQAVRPKRDGLFVTRCLLVSPPSTEQLMIDPFVF 340
++ + L+M Q+A N+ ++ +V RP G FV R L S S E L++
Sbjct: 231 -LQTKIATLDMSSDQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTS-EGLLLK---- 284
Query: 341 VDRTLSKEVQDDSDDEDE 358
+D L KEV+++ ++++
Sbjct: 285 IDPLLPKEVKNEESEKED 302
>BC014356-1|AAH14356.1| 303|Homo sapiens mitochondrial ribosomal
protein L1 protein.
Length = 303
Score = 90.2 bits (214), Expect = 1e-17
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P DDVY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 117
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 118 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---D 173
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFG 280
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 174 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV--DEERENF- 230
Query: 281 SVEVPVGRLNMEPKQVAENIGKLLKDVQAVRPKRDGLFVTRCLLVSPPSTEQLMIDPFVF 340
++ + L+M Q+A N+ ++ +V RP G FV R L S S E L++
Sbjct: 231 -LQTKIATLDMSSDQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTS-EGLLLK---- 284
Query: 341 VDRTLSKEVQDDSDDEDE 358
+D L KEV+++ ++++
Sbjct: 285 IDPLLPKEVKNEESEKED 302
>AB049474-1|BAB40180.1| 303|Homo sapiens mitochondrial ribosomal
protein L1 (L1mt) protein.
Length = 303
Score = 90.2 bits (214), Expect = 1e-17
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P DDVY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 117
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 118 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---D 173
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFG 280
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 174 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV--DEERENF- 230
Query: 281 SVEVPVGRLNMEPKQVAENIGKLLKDVQAVRPKRDGLFVTRCLLVSPPSTEQLMIDPFVF 340
++ + L+M Q+A N+ ++ +V RP G FV R L S S E L++
Sbjct: 231 -LQTKIATLDMSSDQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTS-EGLLLK---- 284
Query: 341 VDRTLSKEVQDDSDDEDE 358
+D L KEV+++ ++++
Sbjct: 285 IDPLLPKEVKNEESEKED 302
>BC015109-1|AAH15109.1| 303|Homo sapiens mitochondrial ribosomal
protein L1 protein.
Length = 303
Score = 89.8 bits (213), Expect = 1e-17
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P DDVY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 117
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 118 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAASAGGTSLIQKIWDDEIVA---D 173
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFG 280
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 174 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV--DEERENF- 230
Query: 281 SVEVPVGRLNMEPKQVAENIGKLLKDVQAVRPKRDGLFVTRCLLVSPPSTEQLMIDPFVF 340
++ + L+M Q+A N+ ++ +V RP G FV R L S S E L++
Sbjct: 231 -LQTKIATLDMSSDQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTS-EGLLLK---- 284
Query: 341 VDRTLSKEVQDDSDDEDE 358
+D L KEV+++ ++++
Sbjct: 285 IDPLLPKEVKNEESEKED 302
>AK024791-1|BAB15005.1| 248|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21138 fis, clone CAS07525. ).
Length = 248
Score = 87.8 bits (208), Expect = 5e-17
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P D+VY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 5 PEDNVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 62
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 63 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---D 118
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFG 280
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 119 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV--DEERENF- 175
Query: 281 SVEVPVGRLNMEPKQVAENIGKLLKDVQAVRPKRDGLFVTRCLLVSPPSTEQLMIDPFVF 340
++ + L+M Q+A N+ ++ +V RP G FV R L S S E L++
Sbjct: 176 -LQTKIATLDMSSGQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTS-EGLLLK---- 229
Query: 341 VDRTLSKEVQDDSDDEDE 358
+D L KEV+++ ++++
Sbjct: 230 IDPLLPKEVKNEESEKED 247
>BC017765-1|AAH17765.1| 302|Homo sapiens Unknown (protein for
IMAGE:4284885) protein.
Length = 302
Score = 87.0 bits (206), Expect = 9e-17
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 11/240 (4%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P DDVY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 117
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 118 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---D 173
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSFG 280
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 174 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV--DEERENF- 230
Query: 281 SVEVPVGRLNMEPKQVAENIGKLLKDVQAVRPKRDGLFVTRCLLVSPPSTEQLM-IDPFV 339
++ + L+M Q+A N+ ++ +V RP G FV R L S S L+ IDP +
Sbjct: 231 -LQTKIATLDMSSDQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTSEGLLLKIDPLL 289
>AC112225-1|AAY41057.1| 237|Homo sapiens unknown protein.
Length = 237
Score = 64.5 bits (150), Expect = 6e-10
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 101 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 160
P DDVY + Y +Y E AV ++ F +P ++ + +M + + + ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMA-LGKKKNVEP 117
Query: 161 FTRLSLLPHPFPREEERTILAFCKGAELIKELQDAGATVAGGTXXXXXXXXXXXXLFEYD 220
FT + LP+PF E + + F + A +K ++ GA AGGT D
Sbjct: 118 FTSVLSLPYPFASEINK-VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA---D 173
Query: 221 YVVAHPNILTDLVPIRGLMKKRFPNVRSGTLDPNLKELVKKFAGGIQYKVIKDEAQPSF 279
+ VA P I+ +L +R + K++P + ++ ++ ++++ F G + KV DE + +F
Sbjct: 174 FYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKV--DEERENF 230
>BC128234-1|AAI28235.1| 234|Homo sapiens Unknown (protein for
IMAGE:40114659) protein.
Length = 234
Score = 33.9 bits (74), Expect = 0.90
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 82 RKVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFN 135
R+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 4 RQVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATS 63
Query: 136 APDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 64 TINLYFGSKVRSPVSGILFNNEMDDFSSPSI 94
>X60069-1|CAA42674.1| 569|Homo sapiens gamma-glutamyltranspeptidase
protein.
Length = 569
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 83 KVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFNA 136
+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 340 EVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATST 399
Query: 137 PDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 400 INLYFGSKVRSPVSGILFNNEMDDFSSPSI 429
>M24903-1|AAA52546.1| 569|Homo sapiens GGT1 protein.
Length = 569
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 83 KVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFNA 136
+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 340 EVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATST 399
Query: 137 PDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 400 INLYFGSKVRSPVSGILFNNEMDDFSSPSI 429
>M24087-1|AAA35899.1| 569|Homo sapiens gamma-glutamyl
transpeptidase protein.
Length = 569
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 83 KVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFNA 136
+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 340 EVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATST 399
Query: 137 PDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 400 INLYFGSKVRSPVSGILFNNEMDDFSSPSI 429
>J04131-1|AAA52547.1| 569|Homo sapiens GGT1 protein.
Length = 569
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 83 KVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFNA 136
+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 340 EVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATST 399
Query: 137 PDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 400 INLYFGSKVRSPVSGILFNNEMDDFSSPSI 429
>CR456494-1|CAG30380.1| 569|Homo sapiens GGT1 protein.
Length = 569
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 83 KVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFNA 136
+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 340 EVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATST 399
Query: 137 PDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 400 INLYFGSKVRSPVSGILFNNEMDDFSSPSI 429
>BC065921-1|AAH65921.1| 239|Homo sapiens GGT1 protein protein.
Length = 239
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 83 KVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFNA 136
+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 10 EVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATST 69
Query: 137 PDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 70 INLYFGSKVRSPVSGILFNNEMDDFSSPSI 99
>BC025927-1|AAH25927.1| 569|Homo sapiens gamma-glutamyltransferase
1 protein.
Length = 569
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 83 KVVKTVVNKHFSDEHKA-IPIDDVYPMKYYKWVVYTAEDAVKAH-----QETHHPTMFNA 136
+VV+ + ++ F+ + +A I D +P+ YYK YT +D AH ++ + +
Sbjct: 340 EVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATST 399
Query: 137 PDAFIFAKIEFNMTGIKQTRFMDSFTRLSL 166
+ + +K+ ++GI MD F+ S+
Sbjct: 400 INLYFGSKVRSPVSGILFNNEMDDFSSPSI 429
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 237 GLMKKRFPNVRSGTL-----DPNLKELVKKFAGGIQYKVIKDEAQPSFGSVEVPVGRLNM 291
G K FPNV D LK+L KF + KV+ DE+ S G V R
Sbjct: 184 GARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 292 EPKQVAENIGKLLKDVQ 308
K V E GK L Q
Sbjct: 244 AQKAVDEMNGKELNGKQ 260
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 237 GLMKKRFPNVRSGTL-----DPNLKELVKKFAGGIQYKVIKDEAQPSFGSVEVPVGRLNM 291
G K FPNV D LK+L KF + KV+ DE+ S G V R
Sbjct: 184 GARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 292 EPKQVAENIGKLLKDVQ 308
K V E GK L Q
Sbjct: 244 AQKAVDEMNGKELNGKQ 260
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 237 GLMKKRFPNVRSGTL-----DPNLKELVKKFAGGIQYKVIKDEAQPSFGSVEVPVGRLNM 291
G K FPNV D LK+L KF + KV+ DE+ S G V R
Sbjct: 184 GARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 292 EPKQVAENIGKLLKDVQ 308
K V E GK L Q
Sbjct: 244 AQKAVDEMNGKELNGKQ 260
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 237 GLMKKRFPNVRSGTL-----DPNLKELVKKFAGGIQYKVIKDEAQPSFGSVEVPVGRLNM 291
G K FPNV D LK+L KF + KV+ DE+ S G V R
Sbjct: 184 GARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 292 EPKQVAENIGKLLKDVQ 308
K V E GK L Q
Sbjct: 244 AQKAVDEMNGKELNGKQ 260
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 237 GLMKKRFPNVRSGTL-----DPNLKELVKKFAGGIQYKVIKDEAQPSFGSVEVPVGRLNM 291
G K FPNV D LK+L KF + KV+ DE+ S G V R
Sbjct: 184 GARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 292 EPKQVAENIGKLLKDVQ 308
K V E GK L Q
Sbjct: 244 AQKAVDEMNGKELNGKQ 260
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.136 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,337,514
Number of Sequences: 224733
Number of extensions: 1770657
Number of successful extensions: 3425
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3417
Number of HSP's gapped (non-prelim): 21
length of query: 364
length of database: 73,234,838
effective HSP length: 91
effective length of query: 273
effective length of database: 52,784,135
effective search space: 14410068855
effective search space used: 14410068855
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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