Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002207-TA|BGIBMGA002207-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(250 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 50 2e-07
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 44 2e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 42 6e-05
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 42 6e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 40 3e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 40 5e-04
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 39 8e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 38 0.001
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 38 0.001
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 37 0.003
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 33 0.039
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 30 0.28
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 28 1.5
SPCC645.11c |mug117||meiotically upregulated gene Mug117|Schizos... 27 2.0
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 27 2.0
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 27 2.6
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 4.5
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 26 4.5
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 4.5
SPAC1687.20c |mis6||inner centromere protein Mis6|Schizosaccharo... 25 7.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 50.4 bits (115), Expect = 2e-07
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 186 ERCGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVH 229
E CGK ++L H+RTH+ ERPF C C K F ++S LK+H
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH 73
Score = 37.5 bits (83), Expect = 0.002
Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 17/203 (8%)
Query: 35 DQVFSSRKPYIFCHL--CHAQLLICHRFRERCQHSNEVLEQTLNNEVLDSLKYPPNAKCA 92
D+ FS + + H+ CH LL + C+ +Q L N V + + + C
Sbjct: 121 DECFSKHQQ-LRSHISACHTHLLPYPCTYQDCE-LRFATKQKLQNHVNRAHEKIISYSCP 178
Query: 93 NCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREHLLETHGNKKNDKLY 152
+ + +E + S N +C+ CGR F + + LR H++ + K Y
Sbjct: 179 H--ESCVGHEGFEKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTY 236
Query: 153 PCTK--CKKTFXXXXXXXXXXXXXXXXXXXXXVVCERCGKALPNTTILRYHMRTHTGERP 210
C CKK+F C+ CG +L+ H+ T
Sbjct: 237 HCPMEGCKKSFTRSSALKKHISVIHEGNMAFH--CDSCGTKFGYKHMLQRHLERGT---- 290
Query: 211 FQCPDCPKGFVKQSSLKVHLGIK 233
C K ++ + +K H GI+
Sbjct: 291 --CKKAHKPYINECGIK-HDGIE 310
Score = 33.9 bits (74), Expect = 0.023
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVHLGI 232
C KA + L+ H R HT +PF C C F Q L+ H+ +
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEV 106
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLK----VHLGIK 233
C K L+ HM THT RPFQC C K F +Q + +H GIK
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIK 626
Score = 32.7 bits (71), Expect = 0.052
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
C C K+ R H + HTG + F C C + F + +L H
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 42.3 bits (95), Expect = 6e-05
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVHL 230
C R G + L H+R+HTGE+PF C P+C + F + +L H+
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 42.3 bits (95), Expect = 6e-05
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHLGI 232
C K + + H++TH +RP++C C GFV+ LK HL I
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRI 494
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
C+ C L+ H+R H RP+ C +C K F + +L H
Sbjct: 475 CDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRFNRLDALNRH 518
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVHLGIKLPARRKNQP 242
C C KA H+RTHTGE+P C P C K F + L H I A +
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRRNA 87
Query: 243 QVA 245
A
Sbjct: 88 AAA 90
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 184 VCERCGKALPNTTILRYHMRT-HTGERPFQCPDCPKGFVKQSSLKVH 229
VC C K + LR H+R+ HT E+PF C C K F ++ +L+ H
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 91 CANCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREH 138
C C +F +E R H S + S C CG+ F R +LR+H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKP--FVCI-CGKRFSRRDNLRQH 469
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 207 GERPFQCPDCPKGFVKQSSLKVHL 230
G + F CP+C K F + L+ H+
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHI 442
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 38.7 bits (86), Expect = 8e-04
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 201 HMRTHTGERPFQC--PDCPKGFVKQSSLKVHL 230
H+R+HTGE+PF+C P C K F ++ L H+
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRHV 53
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 184 VCERCGKALPNTTILRYHMRTHTGERPFQCPD 215
VCE C +A L+ H+R+HT E+PF C +
Sbjct: 71 VCETCTRAFARLEHLKRHIRSHTNEKPFTCSE 102
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVH 229
C C + + L+ H +HTGERPF C C K F +S+++ H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH 516
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 211 FQCPDCPKGFVKQSSLKVH 229
++C +C +GF + SSLK+H
Sbjct: 468 YRCTECLQGFSRPSSLKIH 486
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 90 KCANCETRFLNNEAYRTHSMSCNKSASMPGAA-CAHCGRSFDSRSSLREH 138
+C C F + + H+ S + P A CG++F+ RS++R H
Sbjct: 469 RCTECLQGFSRPSSLKIHTYS--HTGERPFVCDYAGCGKAFNVRSNMRRH 516
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHLGIK 233
C K+ R H R+HT + F CP C F + L H+ K
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQK 69
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 33.1 bits (72), Expect = 0.039
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHL 230
C K+ LR H RTH + F C C + F + L H+
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHV 75
Score = 29.1 bits (62), Expect = 0.64
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 198 LRYHMRTHT-GERPFQC--PDCPKGFVKQSSLKVH 229
L+ R H G+ F C PDCPK F ++ L+ H
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRH 46
Score = 28.7 bits (61), Expect = 0.85
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 93 NCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREHLLETHGNKKN 148
+C F E R H + ++ +C+ C R+F L H+ + H K+N
Sbjct: 32 DCPKSFTRKEHLRRHERT---HENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 125 CGRSFDSRSSLREHLLETHGNKKNDKLYPCTKCKKTF 161
C +SF + LR H TH +N K + C+ C + F
Sbjct: 33 CPKSFTRKEHLRRHE-RTH---ENVKAFSCSFCNRAF 65
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 30.3 bits (65), Expect = 0.28
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHL 230
C++C K L H H+ P CP C ++ LK H+
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHI 78
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 18 KKIENSQLEETFRLLSGDQVFSSRKPYIFCHLCHAQLLICHRFRERCQHSNEVLEQTL 75
KK ++S R+LSG+Q + +++ H + +LI +R ++ + N V +
Sbjct: 295 KKEDSSPCGYIIRILSGEQTVKYDREFLYAH-NNTDMLILNRTKDSLEARNSVFHNAV 351
>SPCC645.11c |mug117||meiotically upregulated gene
Mug117|Schizosaccharomyces pombe|chr 3|||Manual
Length = 186
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 77 NEVLDSLKYPPNAKCANCETRFLNNEAYRT 106
NE++D N +C+ C TRF NN+ T
Sbjct: 126 NEIIDEFDQL-NLQCSACGTRFFNNDNENT 154
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 79 VLDSLKYPPNAKCANCETRFLNNEAYRTHSMSC 111
V +L+ PN C+ C T F ++ A H +C
Sbjct: 165 VQKALRPTPNLICSKCNTTFNHSTALMMHEATC 197
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 99 LNNEAYRTHSMSCNKSAS--MPGAACAHCGRSFDSRSSLREHLLETHGNKKNDKLY 152
L+N + S S +S + C CG + S+L +HL TH N N+K++
Sbjct: 16 LSNHSGTNLSTSAQSDSSNIVKATECPICGLELPNLSALNDHLDVTHFN-DNEKIH 70
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 71 LEQTLNNEVLDSLKYPPNAKCANCET-RFLNNEAYRTHSMSCNKSASM 117
++ L+N+ L + + P A+ C T ++ E CN+S +M
Sbjct: 611 IQDMLHNKKLSNAYFVPRARATTCTTLTYVTVEPSHFQDEDCNESTNM 658
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 11 CLGVENLKKIENSQLEETFRLLS 33
C G+ENL+ +E S ET+ LS
Sbjct: 102 CSGIENLQHVEKSARIETYSKLS 124
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 208 ERPFQCP--DCPKGFVKQSSLKVH 229
++P++CP +C K + Q+ LK H
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH 370
>SPAC1687.20c |mis6||inner centromere protein
Mis6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 51 HAQLLICHRFRERCQHSNEVLEQTLNNEVLDSLKYPPNAKCANC-ETRFLN 100
H QLLI +C + NE++ QT+ ++ SL P +C+ + + LN
Sbjct: 72 HVQLLI------KCLYPNELISQTIAIRIISSLD-PHGLRCSYAIQAKLLN 115
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.134 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,093,273
Number of Sequences: 5004
Number of extensions: 41000
Number of successful extensions: 182
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 139
Number of HSP's gapped (non-prelim): 44
length of query: 250
length of database: 2,362,478
effective HSP length: 71
effective length of query: 179
effective length of database: 2,007,194
effective search space: 359287726
effective search space used: 359287726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)
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