Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002207-TA|BGIBMGA002207-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(250 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 45 5e-05
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 40 0.003
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 38 0.006
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 37 0.013
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 34 0.095
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 34 0.095
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 34 0.13
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 32 0.38
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 31 0.89
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 31 0.89
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 31 0.89
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 31 0.89
11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009 31 1.2
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 31 1.2
05_07_0270 + 28844330-28844727,28844847-28844969,28845082-28845490 30 1.5
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 30 1.5
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 30 1.5
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 30 1.5
01_01_0990 + 7847066-7847478,7847713-7848679 30 1.5
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 30 2.0
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 29 2.7
09_02_0366 + 7941550-7942161,7942230-7942775 29 2.7
12_01_0119 + 905916-907277,907737-907774,908269-908492,909411-90... 29 3.6
06_03_0743 + 24069752-24070483,24071890-24072345 29 3.6
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 29 3.6
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 29 3.6
01_06_1412 - 37140654-37141088,37141549-37142214 29 3.6
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 29 3.6
06_03_0610 - 22715637-22716797 29 4.7
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 29 4.7
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 28 6.2
07_03_1249 - 25172651-25172893,25173001-25173355,25173435-251735... 28 6.2
05_05_0022 + 21592403-21593083,21593720-21594208 28 6.2
01_05_0421 + 21990034-21990392,21991691-21992681 28 6.2
09_04_0564 + 18565583-18566449,18569662-18570123 28 8.3
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389... 28 8.3
08_02_1602 - 28148255-28149413,28151927-28152087 28 8.3
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 28 8.3
02_05_0667 + 30739612-30739783,30739872-30739957,30740832-307408... 28 8.3
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 28 8.3
01_06_0290 + 28235024-28235037,28235160-28235643 28 8.3
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQCP--DCPKGFVKQSSLKVHL 230
C+ CG + L+ HM++H+ ER F CP DCP ++++ L H+
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHM 109
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
Query: 125 CGRSFDSRSSLREHLLETHGNK---KNDKLYPCTK--CKKTFXXXXXXXXXXXXXXXXXX 179
CGR F +++++ H+ E H ++ K+++ + C + C K F
Sbjct: 124 CGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDY 183
Query: 180 XXXVVCE-RCGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHL 230
V CE C K N LR H + QC C + +K+ ++K HL
Sbjct: 184 VEVVCCEPGCMKTFTNVECLRAH--NQACHQYVQCDICGEKHLKK-NIKRHL 232
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 124 HCGRSFDSRSSLREHLLETHGNKKNDKLYPCTK--CKKTFXXXXXXXXXXXXXXXXXXXX 181
+CG++F ++LR+H H N++ Y C + C K F
Sbjct: 93 NCGKTFVDVAALRKHA-HVH----NERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDF- 146
Query: 182 XVVCER--CGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVHL 230
+C CGKA LR H++TH E C P C K F S LK H+
Sbjct: 147 --ICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHV 197
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 186 ERCGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVH 229
E CGK + LR H H ER + C P C K FV S LK H
Sbjct: 92 ENCGKTFVDVAALRKHAHVH-NERQYICQEPGCGKKFVDSSKLKRH 136
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 87 PNAKCANCETRFLNNEAYRTHSMSCNKSAS---MPGAACAHCGRSFDSRSSLREHLLETH 143
P KC C F +++ H +K G +CA C SF +R L H+ E H
Sbjct: 461 PGLKCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKH 520
Query: 144 GNK--KNDKLYPCTKCKKTF 161
G + + L C C F
Sbjct: 521 GAQYLQYSTLLRCISCNSNF 540
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 186 ERCGKALPNTTILRYHMRTHTGERPFQCP--DCPKGF----VKQSSLKVHLG 231
E CGK + L+ H H ERPF+CP CP F + ++VH G
Sbjct: 822 ESCGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTG 873
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 201 HMRTHTGERPFQC--PDCPKGFVKQSSLKVH 229
H+R HTGERP++C PDC + F S H
Sbjct: 867 HIRVHTGERPYKCSAPDCGQSFRYVSDYSRH 897
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 34.3 bits (75), Expect = 0.095
Identities = 45/175 (25%), Positives = 61/175 (34%), Gaps = 19/175 (10%)
Query: 72 EQTLNNEVLDSLKYPPNAKCANCETRFLNNEAYRTHSMSC-NKSASMPGAACAHCGRSFD 130
E + + +D +K K N + + ++A T + NK A P C SF
Sbjct: 1186 EDKITEDKIDDVKVKSRGKSQNGKRKGSKHQA--TDGLRAGNKVAKFP-CDIEGCDMSFS 1242
Query: 131 SRSSLREHLLETHGNKKNDKLYPCTKCKKTFXXXXXXXXXXXXXXXXXXXXXVVCERCGK 190
++ L H K D + P CKK F + C K
Sbjct: 1243 TQQDLLLH--------KRD-ICPVKGCKKKFFCHKYLLQHRKVHIDERPLK-CTWKGCKK 1292
Query: 191 ALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVH---LGIKLPARRKN 240
A HMR HTG RP++C P C + F S H G RRKN
Sbjct: 1293 AFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSRHKRKTGHSSDKRRKN 1347
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 34.3 bits (75), Expect = 0.095
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 186 ERCGKALPNTTILRYHMRTHTGERPFQC--PDCPKGFVKQSSLKVH 229
E CGK + LR H H GER + C C K F+ S LK H
Sbjct: 48 EGCGKTFVDAGALRKHAHVH-GERQYVCHYAGCDKKFLDSSKLKRH 92
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCP--DCPK--GFVKQSSLKVHL 230
C K +++ L+ H HTGE+ F CP C K F +LK H+
Sbjct: 79 CDKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHM 125
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 197 ILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHL 230
I ++ R H G R + C C KG+ QS K HL
Sbjct: 117 IKKHFRRKHGGRRQWVCARCAKGYAVQSDYKAHL 150
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 185 CERCGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
C+RCGK L+ H +T G R ++C DC F ++ S H
Sbjct: 139 CQRCGKRYAVQADLKAHTKT-CGTREYRC-DCGTLFTRRDSFVTH 181
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+AL + T ++ H GE+ + C C K + Q+ LK H
Sbjct: 116 RALGDLTGIKKHFCRKHGEKRWTCQRCGKRYAVQADLKAH 155
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 193 PNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH-LGIKLPAR-RKNQPQVAVP 247
P+ ++ T F C C KGF + +L++H G LP R R+ P A P
Sbjct: 41 PDAEVIALSPGTLLATNRFVCEVCGKGFQRDQNLQLHRRGHNLPWRLRQRGPGAAPP 97
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 197 ILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHL 230
I ++ R H+G R + C C K + S K HL
Sbjct: 130 IKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHL 163
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 197 ILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHL 230
I ++ R H+G R + C C K + S K HL
Sbjct: 129 IKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHL 162
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 125 CGRSFDSRSSLREHLLETHGN-----KKNDKLYPCTKCKKTFXXXXXXXXXXXXXXXXXX 179
C R F + +++ H+ E H + K + + P C KTF
Sbjct: 323 CNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKLDY 382
Query: 180 XXXVVCE-RCGKALPNTTILRYHMRT 204
+ CE C KA N L+ H ++
Sbjct: 383 SEVICCEPGCMKAFTNLECLKAHNKS 408
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCP--DCPKGF----VKQSSLKVHLG 231
CGK + L H + HT +RP CP C F + L+VH G
Sbjct: 1116 CGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTG 1165
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 201 HMRTHTGERPFQC--PDCPKGFVKQSSLKVH 229
H+R HTG+RP+ C P C + F S H
Sbjct: 1159 HLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH 1189
>11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009
Length = 431
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 211 FQCPDCPKGFVKQSSLKVH 229
F CPDC + FVK SL++H
Sbjct: 194 FSCPDCDEVFVKPDSLELH 212
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHLGI 232
+AL + T ++ H GE+ ++C C K + QS K H I
Sbjct: 121 RALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKI 163
>05_07_0270 + 28844330-28844727,28844847-28844969,28845082-28845490
Length = 309
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 207 GERPFQCPDCPKGFVKQSSLKVHLGIKLPARRKNQPQVAVPT 248
G++P + P+G+ K SSLK + K+ R +P V V T
Sbjct: 163 GQKPIKGSPYPRGYYKCSSLKACMARKMVERSPEKPGVLVIT 204
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+AL + T ++ H GE+ ++C C K + QS K H
Sbjct: 99 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH 138
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 193 PNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH-LGIKLPARRKNQ 241
P+ ++ +T F C C KGF ++ +L++H G LP + K +
Sbjct: 25 PDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQK 74
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+AL + T ++ H GE+ ++C C K + QS K H
Sbjct: 103 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAH 142
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 189 GKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH-LGIKLP 235
G A P+ ++ +T F C C KGF + +L++H G LP
Sbjct: 26 GGADPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLP 73
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+AL + T ++ H GE+ ++C C K + QS K H
Sbjct: 151 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH 190
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 193 PNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH-LGIKLPARRKNQ 241
P+ ++ +T F C C KGF ++ +L++H G LP + K +
Sbjct: 77 PDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQK 126
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+AL + T ++ H GE+ ++C C K + QS K H
Sbjct: 80 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH 119
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 193 PNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH-LGIKLPARRKNQ 241
P+ ++ RT F C C KGF ++ +L++H G LP + K +
Sbjct: 30 PDAEVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQK 79
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 195 TTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
T I +++ R H GE+ ++C C K + QS K H
Sbjct: 109 TGIKKHYCRKH-GEKKWRCDKCSKRYAVQSDWKAH 142
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 118 PGAACAHCGRSFDSRSSLREHLLETHGNKK 147
P C C + F + SLREH++ HG +K
Sbjct: 176 PETQCQMCSKVFSTSGSLREHMM-MHGGEK 204
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 91 CANCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREHL 139
C C RF +RTH +C K C CG F + SL++H+
Sbjct: 281 CRRCGKRFAVRGDWRTHEKNCGKL-----WFCV-CGSDFKHKRSLKDHV 323
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+ L + L+ H R G RP+ C C K F + + H
Sbjct: 258 RPLKDFRTLQTHYRRKHGARPYACRRCGKRFAVRGDWRTH 297
>12_01_0119 +
905916-907277,907737-907774,908269-908492,909411-909637,
909733-909980,910275-910557,910707-911135
Length = 936
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 104 YRTHSMSCNKSASMPGAACAHCGRSF 129
+RTH+ C+ AS P C C R F
Sbjct: 4 HRTHASDCHPVASQPDVQCLVCTRPF 29
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 91 CANCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREHL 139
C C F +RTH +C K CA CG F + SL++H+
Sbjct: 314 CRKCGKAFAVRGDWRTHEKNCGKL-----WYCA-CGSDFKHKRSLKDHI 356
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 29.1 bits (62), Expect = 3.6
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Query: 47 CHLCHAQLLICHRFRERCQHSNEVLEQTLNNEVLDSLKYPPNAKCANCETRFLNNEAYRT 106
C C L +R ER +H+ ++ E+ N++ L+SLK +C+ C R L+
Sbjct: 171 CTTCGKMCLHPYRPDEREEHT-KLCEK--NHKRLESLKRSQEIECSVCLDRVLSKPTAAE 227
Query: 107 HSMSCNKSASMPGAACAHCGRSFDSRSSLREHLLETHGNKKNDKLYPCTKCKK 159
P C C R++ + S T G N L C C+K
Sbjct: 228 RKFGLLSECDHP--FCISCIRNWRNNS-------PTSGMDVNSALRACPICRK 271
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 130 DSRSSLREHLLETHGNKKNDKLYPCT--KCKKTFXXXXXXXXXXXXXXXXXXXXXVVCER 187
D + L ++ + G KK K + C C+ TF +
Sbjct: 518 DIKRELEDNSTASKGKKKRAKRFQCEIDYCRMTFKNRAELSVHKKNT--------CTVKS 569
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCP 214
CG+ + LR H H + P++CP
Sbjct: 570 CGRHFRSHKYLRRHQSIHNDDMPYKCP 596
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 90 KCANCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREHL 139
+C C F +RTH +C K CA CG F + SL +H+
Sbjct: 291 RCRRCAKPFAVKGDWRTHEKNCGKR-----WFCA-CGSDFKHKRSLNDHV 334
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+ L + L+ H + G +PF+C C K F + + H
Sbjct: 269 RPLKDFRTLQTHYKRKHGAKPFRCRRCAKPFAVKGDWRTH 308
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+AL + T ++ H GE+ ++C C K + S K H
Sbjct: 130 RALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAH 169
>06_03_0610 - 22715637-22716797
Length = 386
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 188 CGKALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
CG + +I++ + + RPF+CP CP V ++H
Sbjct: 347 CGHVVSKQSIMKL---SKSSSRPFKCPYCPSEAVASQCKQLH 385
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 91 CANCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREH 138
C C RF +RTH +C + CA CG F + SL +H
Sbjct: 250 CRRCAKRFAVRGDWRTHEKNCGRL-----WRCA-CGAHFRHKRSLNDH 291
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVHL 230
+AL + T ++ H GE+ ++C C K + S K H+
Sbjct: 103 RALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHV 143
>07_03_1249 -
25172651-25172893,25173001-25173355,25173435-25173593,
25173809-25174269,25175137-25175322,25175429-25175800
Length = 591
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 27 ETFRLLSGDQVFSSRKPYIFCHLCHAQLLIC-HRFRERCQHSNEVLEQTLNNEVLDSLKY 85
ET + + P C C +Q C + +RC HS +L L NE + ++
Sbjct: 459 ETLHIDHPSSLTHGAPPRAICS-CSSQSDDCPFSYSKRCDHSGPILVILLENEKMSVQEF 517
Query: 86 PPNA 89
P N+
Sbjct: 518 PQNS 521
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 91 CANCETRFLNNEAYRTHSMSCNKSASMPGAACAHCGRSFDSRSSLREHL 139
C C F +RTH +C K CA CG F + SL +H+
Sbjct: 300 CRRCAKPFAVKGDWRTHEKNCGKR-----WFCA-CGSDFKHKRSLNDHV 342
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
+AL + T ++ H GE+ ++C C K + S K H
Sbjct: 62 RALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAH 101
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 190 KALPNTTILRYHMRTHTGERPFQCPDCPKGFVKQSSLKVH 229
K L + L+ H + G +PF C C K F + + H
Sbjct: 336 KPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTH 375
>09_04_0237 -
15936630-15937250,15937457-15937534,15938874-15938973,
15940414-15942278
Length = 887
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 33 SGDQVFSSRKPYIFCHLCHAQLLICHRFRERCQ 65
+G +V S R +FC+LC Q+ +E+CQ
Sbjct: 614 AGCRVMSCRCRMVFCYLCGLQIGAVLEGKEKCQ 646
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 185 CERCGKALPNTTILRYHMRTHTGE 208
C+ CGK LR HMR H E
Sbjct: 260 CQVCGKGFKRDANLRMHMRAHGDE 283
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 185 CERCGKALPNTTILRYHMRTHTGE 208
C+ CGK LR HMR H E
Sbjct: 324 CQVCGKGFKRDANLRMHMRAHGDE 347
>02_05_0667 +
30739612-30739783,30739872-30739957,30740832-30740837,
30741521-30741586,30741664-30741834,30742032-30742202,
30742457-30742612,30742705-30742851,30742964-30743035,
30743122-30743652,30743739-30743926,30744781-30744838
Length = 607
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 62 ERCQHSNEVLEQT--LNNEVL-DSLKYPPNAKCANCETRFLNNEAYRTHSM--SCNKSAS 116
ER S L++ L +VL D L+ PP+ E + + N R S+ + N S
Sbjct: 339 ERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRPTEGKSIGNGPSRRLSLGGADNMSKI 398
Query: 117 MPGAACAHCGRSFDSRSSL 135
P A SF+SRSSL
Sbjct: 399 SPNGMLARRSPSFNSRSSL 417
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 72 EQTLNNEVLDSL-KYPPNAKCANCET 96
E+ N +++ L K PPN KC NC +
Sbjct: 6 EEERNEKIIRGLMKLPPNRKCINCNS 31
>01_06_0290 + 28235024-28235037,28235160-28235643
Length = 165
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 30 RLLSGDQVFSSRKPYI-FCHLCHAQLLICHRFRERCQHSNEV 70
R L+GD + P+ C LC + CH +C ++N V
Sbjct: 32 RCLTGDNLAKRGWPHDPLCALCSIDMEDCHHLLVKCPYTNRV 73
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.134 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,910,008
Number of Sequences: 37544
Number of extensions: 252511
Number of successful extensions: 837
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 742
Number of HSP's gapped (non-prelim): 109
length of query: 250
length of database: 14,793,348
effective HSP length: 80
effective length of query: 170
effective length of database: 11,789,828
effective search space: 2004270760
effective search space used: 2004270760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -