Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002206-TA|BGIBMGA002206-PA|undefined
(225 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 30 0.24
SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc... 30 0.24
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.24
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 28 1.3
SPCC757.04 |||transcription factor |Schizosaccharomyces pombe|ch... 28 1.3
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 27 1.7
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 1.7
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.2
SPBC3B8.05 |||diphthamide biosynthesis protein |Schizosaccharomy... 27 2.2
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 27 3.0
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 26 3.9
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 26 3.9
SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3 |Schi... 26 5.2
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 5.2
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 25 6.8
SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 25 6.8
SPAC31G5.02 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.8
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 25 6.8
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 9.1
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 30.3 bits (65), Expect = 0.24
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 40 LQEPKNEISTSQIEKPIGVPE-NGTSTTQQKHENETVLREDKEKSCLT 86
+ EP ST E P +P+ NG+ TT+ N L+E++ K ++
Sbjct: 514 IHEPYRPASTQPTENPPAMPDHNGSPTTEPPKPNAFELKEERLKEIIS 561
>SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 536
Score = 30.3 bits (65), Expect = 0.24
Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Query: 5 HVFIAITFMKYSKCYVIEDSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTS 64
H I + F K C ++ + + + I + P + VPE G
Sbjct: 122 HSKIMVNFFKDDSCQIVIHTANLVEPDWIGMSQAIFKTPLLYPKANDSLSTSSVPEYGNP 181
Query: 65 TTQQKHENETVLREDKEKSCLTLFFDQVAKIFKH 98
+ +KHE +++D ++C + D + FKH
Sbjct: 182 SKIRKHEGSLDIKDD--RNCDIIDVDSAFENFKH 213
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 30.3 bits (65), Expect = 0.24
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 41 QEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKSCLTLFFDQVAKIFKHLF 100
QE S ++ P+NG S K+EN+T+L+ ++ T ++ + K FK++F
Sbjct: 611 QELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNLEDS---TARYEHLQKSFKNVF 667
Query: 101 YG-DVEKPSN 109
++PSN
Sbjct: 668 NQLRKQQPSN 677
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.9 bits (59), Expect = 1.3
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 23 DSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEK 82
D+ + QK+ L +EI + E+S + K + V + K E L E+K K
Sbjct: 8 DAPTILGQKRELEDVEIQDDDIQEVSKEDLLKDVRVRSIQFDELESKIEGLQNLAEEKLK 67
Query: 83 SCLTL--FFDQVAKIFKHLFYGDVEKPSNS 110
TL ++ ++ + F +F G+ K S
Sbjct: 68 VLATLVSWWPEILQQFSVVFQGNELKDFES 97
>SPCC757.04 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 684
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 29 AQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLRED 79
AQ+ ++ L+ N STS+ PI ENG+S+ Q + V D
Sbjct: 588 AQRSIVLIENTLKGKTNSQSTSEFVSPISDTENGSSSQQVSEAKDIVEPSD 638
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 81 EKSCLTLF--FDQVAKIFKHLFYGDVEKPSNSRIELLESDFAVTNDSGTSREISNHHDIF 138
+ C +F +++ +F H+ G++ P + L ES TND + ++ D F
Sbjct: 465 QSPCSLIFKKLERIVSLFIHIPGGEISLPLGKALLLQESFVEFTNDISNLQNFLSNSDPF 524
Query: 139 ----PNRFDLTDPNAEVEIFEPRY 158
F+ P EVE+ +P +
Sbjct: 525 KRSIQETFEAPKP-FEVEMNQPSF 547
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 35 RKLEILQEPKNEISTSQIEKPIGVPENGT-STTQQKHENETVLREDKEK 82
+KLE K++ S ++P+ VP+ GT Q+ H+ + V KEK
Sbjct: 71 QKLETSDALKSKSKDSSKKEPVVVPKKGTPKIFQENHKVKKVKSPKKEK 119
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/74 (21%), Positives = 36/74 (48%)
Query: 24 SGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKS 83
S + + +++++ K E +E +E S+ E+G S + E+E+ ++K++
Sbjct: 181 SSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRK 240
Query: 84 CLTLFFDQVAKIFK 97
++ AKI K
Sbjct: 241 AEPASEERPAKITK 254
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 42 EPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLRED 79
+PKN STS +PI E +S + H NE++ D
Sbjct: 79 KPKNYDSTSNSNEPISFNEPDSSNSH--HNNESICNND 114
>SPBC3B8.05 |||diphthamide biosynthesis protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 436
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 144 LTDPNAEVEIFEPRYHGRLKEETKEALKCPEGYIM 178
L N EI + +H RL++ + AL+ PEG +M
Sbjct: 68 LLPQNYNFEIHKTIWHIRLRKAKRVALQLPEGLLM 102
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 78 EDKEKSCL----TLFFDQVAKIFKHLFYGDVEKPSNSRIELL 115
ED+E SCL LF+D K+ K L + +V + ELL
Sbjct: 178 EDEEYSCLDINTALFYDCARKLAKSLRFANVSRDPRLSSELL 219
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 157 RYHGRLKEETKEALKCPEGYIMTPNGCTVRNSKMIISVPNQCPIGYRQDWL 207
+YHG L K P ++TP+G N+++ +S + P + W+
Sbjct: 53 QYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRLCLSFSDFHPKSWNPSWM 103
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 78 EDKEKSCLTLFFDQVAKIFKHLFYGDVEKPSNSRIELLESDF 119
ED C++L +D++ +I L +++P R LL+ +F
Sbjct: 435 EDPSLKCVSLIYDELVRILNQL----LQRPIFKRYPLLKDEF 472
>SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 25.8 bits (54), Expect = 5.2
Identities = 8/28 (28%), Positives = 19/28 (67%)
Query: 28 DAQKQLLRKLEILQEPKNEISTSQIEKP 55
+AQK + + + EP+ E+ T+++++P
Sbjct: 123 EAQKLIAQNVPQFTEPEGEVETAEVQEP 150
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 45 NEISTSQIEKPIGVPENGTSTTQQKHENETVL 76
N ++ + + +G+ E T KHENE +L
Sbjct: 711 NPLTAVYVAEQVGIVEKPTLVLDIKHENEKIL 742
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 71 ENETVLREDKEKSCLTLFFDQVAKIFKHLFYGDVEKPSNSRIELLES 117
EN ++ K L L + ++ K F DVE S R E+L+S
Sbjct: 171 ENANPSVREEAKEVLLLIYKNLSTSAKMQFITDVETTSGLRREILQS 217
>SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 48 STSQIEKPIGVPENGTSTTQQKHENETVLREDKE 81
ST + ++ VPE + N T LRE+KE
Sbjct: 102 STDKSQQSFSVPETSIQPQSSQTPNITSLREEKE 135
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 113 ELLESDFAVTNDSGTSREISNHHDIFPNRF 142
+LL A TN SGTS +SN + F
Sbjct: 583 DLLRKTLAYTNSSGTSTVLSNDSSAISSTF 612
>SPAC31G5.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 232
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 141 RFDLTDPNAEVEIFEPRYHGRLKEETKE 168
R+D + + EI RYHGR K E E
Sbjct: 135 RYDQVETMEKYEISMDRYHGRYKLELYE 162
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 6.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 35 RKLEILQEPKN--EISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKSCLTLFFDQV 92
RKL + Q+ K+ E ++ I+K GT T+Q +E E + R E +DQ
Sbjct: 57 RKLLVKQKRKSNKEFQSNIIKKRKDEERKGTLKTEQANEEELLQRSRLELERKAKKYDQY 116
Query: 93 A 93
A
Sbjct: 117 A 117
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 9.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 31 KQLLRKLEILQEP----KNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDK 80
K LL+KL L++ K++ S + KP +P+N +N VLRE K
Sbjct: 250 KDLLQKLLALEKDGQVEKSDCSKNTQLKPSFLPKNTDDLLNGTDDNNIVLREVK 303
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,113,778
Number of Sequences: 5004
Number of extensions: 48433
Number of successful extensions: 163
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 149
Number of HSP's gapped (non-prelim): 24
length of query: 225
length of database: 2,362,478
effective HSP length: 70
effective length of query: 155
effective length of database: 2,012,198
effective search space: 311890690
effective search space used: 311890690
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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