GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002206-TA|BGIBMGA002206-PA|undefined
         (225 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010015-1|AAQ22484.1|  283|Drosophila melanogaster RE16955p pro...    33   0.42 
AY061029-1|AAL28577.1|  283|Drosophila melanogaster HL05730p pro...    33   0.42 
AY051772-1|AAK93196.1|  673|Drosophila melanogaster LD29879p pro...    33   0.42 
AE014297-2362|AAF55427.2|  283|Drosophila melanogaster CG5823-PA...    33   0.42 
AE013599-3917|AAF47240.1|  673|Drosophila melanogaster CG4707-PA...    33   0.42 
AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P...    30   3.0  
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC...    30   3.0  
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy...    29   5.2  
L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.     28   9.1  
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA...    28   9.1  

>BT010015-1|AAQ22484.1|  283|Drosophila melanogaster RE16955p
           protein.
          Length = 283

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 158 YHGRLKEETKEALKCPEGYIMTPNGCTVRNSKMIISVPNQCPIGYRQDW 206
           YHG L    +   K P  Y++TPNG    N+++ +S+ +  P  +   W
Sbjct: 63  YHGTLLFPREFPFKPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTW 111


>AY061029-1|AAL28577.1|  283|Drosophila melanogaster HL05730p
           protein.
          Length = 283

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 158 YHGRLKEETKEALKCPEGYIMTPNGCTVRNSKMIISVPNQCPIGYRQDW 206
           YHG L    +   K P  Y++TPNG    N+++ +S+ +  P  +   W
Sbjct: 63  YHGTLLFPREFPFKPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTW 111


>AY051772-1|AAK93196.1|  673|Drosophila melanogaster LD29879p
           protein.
          Length = 673

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 3   IIHVFIAITFMKYSKCYVIEDSGKVDAQK-QLLRKLEILQEP-KNEISTSQIEKPIGVPE 60
           II+   ++     ++ +      KV+  + + L K+E+L++P K EI T+   K +GVP 
Sbjct: 93  IINPLYSVELDALAEAFFAPSEVKVEVNELEPLPKVELLEDPVKTEIRTAP--KRLGVPN 150

Query: 61  NGTSTTQQKHENETVLREDKE 81
            G+  ++++ +NE  +  D +
Sbjct: 151 EGSPHSKRRIKNELPVDSDSD 171


>AE014297-2362|AAF55427.2|  283|Drosophila melanogaster CG5823-PA
           protein.
          Length = 283

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 158 YHGRLKEETKEALKCPEGYIMTPNGCTVRNSKMIISVPNQCPIGYRQDW 206
           YHG L    +   K P  Y++TPNG    N+++ +S+ +  P  +   W
Sbjct: 63  YHGTLLFPREFPFKPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTW 111


>AE013599-3917|AAF47240.1|  673|Drosophila melanogaster CG4707-PA
           protein.
          Length = 673

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 3   IIHVFIAITFMKYSKCYVIEDSGKVDAQK-QLLRKLEILQEP-KNEISTSQIEKPIGVPE 60
           II+   ++     ++ +      KV+  + + L K+E+L++P K EI T+   K +GVP 
Sbjct: 93  IINPLYSVELDALAEAFFAPSEVKVEVNELEPLPKVELLEDPVKTEIRTAP--KRLGVPN 150

Query: 61  NGTSTTQQKHENETVLREDKE 81
            G+  ++++ +NE  +  D +
Sbjct: 151 EGSPHSKRRIKNELPVDSDSD 171


>AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA,
            isoform A protein.
          Length = 3257

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 16   SKCYVIEDSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQK-HENET 74
            SK  + +DS K DA        ++LQE K+E+S S I    G        T+++   N+T
Sbjct: 1738 SKNPITDDSTK-DASSNKSTDSDVLQETKDELSNSLINATQGEDTPIKELTEEEVPNNKT 1796

Query: 75   VLREDKEKSCL 85
            V  E K++  L
Sbjct: 1797 VEDESKKQEIL 1807


>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
            protein.
          Length = 4699

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)

Query: 123  NDSGT-------SREISNHHDIFPNRFDLTDPNAEVEIFEPRYHGRLKEETKE--ALKCP 173
            ND+GT       S +I   H +  NR ++++P A+      R    L  E+    + KC 
Sbjct: 4136 NDNGTYLLKGYRSSDIGILHPMKQNR-NISNPCAKDPCKSSRALCILSSESSVGYSCKCA 4194

Query: 174  EGYIMTPNGCTVRNSKMIISVPNQCPIG 201
            EGY+MT +G    ++ +    P QC +G
Sbjct: 4195 EGYVMTDDGVCKAHADIPDYCPLQCNLG 4222


>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
           dynein heavy chian protein.
          Length = 4639

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 4   IHVFIAITFMKYSKCYVIEDSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGT 63
           +HVFI+ +   Y K YV ++SG+ D     +      +  + E+    +++ I +PE   
Sbjct: 149 LHVFISKSLAPYFKSYV-KESGRADRDGDKMAPSVEKKLAELEMGLLHLQQNIDIPEITL 207

Query: 64  STTQQKHENETVLREDKEKSCLTLFFDQV 92
           +  Q  +       E+  K+ +  F D+V
Sbjct: 208 TAHQTVNNVIRKCAEENRKAKVADFGDKV 236


>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
          Length = 3503

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 57   GVPENGTSTT-----QQKHENETVLREDKEKSCLTLFFDQVAKIFKHLFYGDVEKPSNSR 111
            GVP   T+ T     Q  ++N  V  +D+    ++      A+I + +   D++  +N+R
Sbjct: 959  GVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQ-VNASDLDTGNNAR 1017

Query: 112  IELLESDFAVTN--DSGTSREISNHHDIFPN 140
            I     D  V N  +S +S ++S H  IFPN
Sbjct: 1018 ITYRIVDAGVDNVTNSISSSDVSQHFGIFPN 1048


>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
            protein.
          Length = 3556

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 57   GVPENGTSTT-----QQKHENETVLREDKEKSCLTLFFDQVAKIFKHLFYGDVEKPSNSR 111
            GVP   T+ T     Q  ++N  V  +D+    ++      A+I + +   D++  +N+R
Sbjct: 1012 GVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQ-VNASDLDTGNNAR 1070

Query: 112  IELLESDFAVTN--DSGTSREISNHHDIFPN 140
            I     D  V N  +S +S ++S H  IFPN
Sbjct: 1071 ITYRIVDAGVDNVTNSISSSDVSQHFGIFPN 1101


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.136    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,882,327
Number of Sequences: 52641
Number of extensions: 520356
Number of successful extensions: 1641
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1634
Number of HSP's gapped (non-prelim): 12
length of query: 225
length of database: 24,830,863
effective HSP length: 82
effective length of query: 143
effective length of database: 20,514,301
effective search space: 2933545043
effective search space used: 2933545043
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)