Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002205-TA|BGIBMGA002205-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap
(130 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.003
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.003
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.014
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.043
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 33 0.056
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.074
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 33 0.098
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.13
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 32 0.17
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.23
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.30
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.40
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 31 0.40
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.40
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 31 0.40
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.52
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.52
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.69
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 29 0.91
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.91
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 28 2.8
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 28 2.8
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 28 2.8
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32) 27 4.9
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 26 8.5
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 26 8.5
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 21 EIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP-VGTNF-KGQRHELVG-R 77
++Y HP V DVAL+KLK+P +F++R+ ++ LP V N G + + G
Sbjct: 65 QLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWG 124
Query: 78 VTDAGEPGSPLV 89
T G P SP++
Sbjct: 125 KTAEGSPYSPVL 136
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 21 EIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
+++ HP Y D D+AL+KLK+P +F +R+ ++ LP
Sbjct: 329 KLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLP 370
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 21 EIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP-VGTNF-KGQRHELVG-R 77
++Y HP V DVAL+KLK+P +F++R+ ++ LP V N G + + G
Sbjct: 442 QLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWG 501
Query: 78 VTDAGEPGSPLV 89
T G P SP++
Sbjct: 502 KTAEGSPYSPVL 513
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 21 EIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
+++ HP Y D D+AL+KLK+P +F +R+ ++ LP
Sbjct: 614 KLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLP 655
Score = 34.7 bits (76), Expect = 0.024
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 22 IYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
I+ HP +V D+ALL L KP+ F++RI+ + LP
Sbjct: 62 IHLHPGFVIGGVSHPGYYDIALLHLAKPIQFSDRIQPICLP 102
Score = 32.7 bits (71), Expect = 0.098
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 21 EIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP-VGTNF-KGQRHELVG-R 77
++Y HP V DVAL+KLK+P +F++ + ++ LP V N G + + G
Sbjct: 325 KLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHKCVYSVCLPSVTANLTTGTKCYVTGWG 384
Query: 78 VTDAGEPGSPLVQNNTLTGIAS--YLEGKDCRKSTLN 112
T G P S LV N I S D T+N
Sbjct: 385 KTAEGSPYS-LVLNEVEVDIVSKEVCNANDSYNGTIN 420
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 35.5 bits (78), Expect = 0.014
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 18 EISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
++ I HP Y + DVAL+KL PL +N+R++ + LP
Sbjct: 181 DVERIILHPKYAPHNNHDY---DVALIKLASPLQYNDRVRPVCLP 222
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 33.9 bits (74), Expect = 0.043
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 9 ENNSTSHMRE---ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNE--RIKALDLPV 63
E N + ++E +S + HP Y +D ND+ALL+L +P+ F+ ++ L
Sbjct: 141 ERNGKTAVQESIPVSHVIEHPEY----DDRKIKNDIALLELSRPVKFDREGKVGTACLTN 196
Query: 64 GTNFKGQRHELVGRVTDAGEPGSPLVQNNTLTGIASYLEGKD 105
G+R + G + G SP + + IAS+ + K+
Sbjct: 197 QQPTPGKRCYITGWGSTIGTGNSPRILQQAMLPIASHNDCKN 238
Score = 29.5 bits (63), Expect = 0.91
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 82 GEPGSPLVQNNT----LTGIASYLEGK-DCRKSTLNFFMSMLQYAEWIKAVTG 129
G+ G PLV + L G SY GK C + F + Y +WIK VTG
Sbjct: 264 GDSGGPLVCEDNGRWYLHGAVSY--GKLHCPTTYYTVFARVASYTDWIKQVTG 314
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 38 LNDVALLKLKKPLIFNERIKALDLPVG 64
++D+ALL+L++ + N+++ LP G
Sbjct: 412 VDDIALLELERSAVINDKVSTACLPSG 438
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 33.5 bits (73), Expect = 0.056
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 19 ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLPVGTN 66
++ I+ HP+Y T ND+A+LKL +P I N+R+ + + TN
Sbjct: 1168 VAAIHKHPSYQAPTR---WANDIAVLKLARPAILNKRVNVVCMENETN 1212
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.1 bits (72), Expect = 0.074
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 7 GGENNSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLPVGTN 66
GGE ++ + + I H Y T LNDVAL++L +P+ ++ LP G
Sbjct: 568 GGETSAQKALN-LKRIILHEGYTTNL-----LNDVALIQLARPVTLGSKVNTACLPTGEI 621
Query: 67 FKGQRHELVG 76
G + + G
Sbjct: 622 AVGSKCYITG 631
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 32.7 bits (71), Expect = 0.098
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 18 EISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
++S ++ H ++T D+ D+ALLKL +P + NE ++ + LP
Sbjct: 119 DVSTLHLHQRFLT---DKGYGYDIALLKLSRPAVINEFVRTVCLP 160
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 19 ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
+ ++ HPNY T D +DVALL+L P N+ + + LP
Sbjct: 1405 VRQVIVHPNYRRQTTD----SDVALLRLSHPATLNKAVSLICLP 1444
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 31.9 bits (69), Expect = 0.17
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 2 YSVWVGGEN---NSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKA 58
Y+V VG + T H ++S Y H YV + + +D+AL+KL KP F+ ++
Sbjct: 82 YTVIVGAHKRVLDGTEH--KLSTFYKHEKYVGGKDKK---HDLALIKLAKPATFSTKVSP 136
Query: 59 LDLP 62
+ LP
Sbjct: 137 VCLP 140
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 31.5 bits (68), Expect = 0.23
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 10 NNSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
+ T ++ I HP Y E ND+AL+KL KP N+ + LP
Sbjct: 418 SEGTEQRFSVARIIVHPQYF---EPTAINNDIALIKLNKPARLNKYVNLACLP 467
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 31.1 bits (67), Expect = 0.30
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 19 ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLPVGT 65
I I+ HP+Y + + + ND+ALL+L +P I RI +P T
Sbjct: 704 IRSIHNHPDYGS---PKRSSNDIALLRLSRPTILTHRINLACMPNDT 747
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 30.7 bits (66), Expect = 0.40
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 19 ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLPVGT-NFKGQRHELV-- 75
I++IY H +Y + NDVAL++L KP I ++ + L GT +F +
Sbjct: 289 IAKIYLHADYNLYPHQYN--NDVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITG 346
Query: 76 -GRVTDAGEPGSPLVQNNTLTGIASYLE 102
GR+ G SP + T + SY E
Sbjct: 347 WGRLHSGG--ASPEILQQAKTKLLSYAE 372
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 30.7 bits (66), Expect = 0.40
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 17 REISEIYFHPNYVT-FTE---DEIALNDVALLKLKKPLIFNERIKALDL 61
R+IS IY H Y + F E D D+AL++L +P IF+E + + L
Sbjct: 22 RDISAIYLHEAYKSMFLEGIKDTPPDFDIALVRLSEPAIFDENVSPICL 70
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 0.40
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 2 YSVWVGGEN---NSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKA 58
Y+V VG + T H ++S Y H YV + + +D+AL++L KP F+ ++
Sbjct: 366 YTVIVGAHKRVLDGTEH--KLSAFYKHEKYVGGKDKK---HDLALIRLAKPAAFSAKVSP 420
Query: 59 LDLP 62
+ LP
Sbjct: 421 VCLP 424
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 30.7 bits (66), Expect = 0.40
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40 DVALLKLKKPLIFNERIKALDLPVGTNFKGQRHELV--GRVTDAGEPGSPLVQNNTL 94
D+ALLKL++P+ FN + + LP G + GR+ ++ PGS ++Q ++
Sbjct: 1880 DIALLKLRQPITFNAYVSQVCLPQAALLAGTPCYVSGWGRIGES-SPGSNVLQEASI 1935
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 30.3 bits (65), Expect = 0.52
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 82 GEPGSPL--VQNN--TLTGIASYLEGKDCRKSTLNFFMSMLQYAEWIKA 126
G+ G PL ++N L G+AS++ + C +T + + + Y+ WI++
Sbjct: 471 GDSGGPLQCLENERWVLRGVASWVTAETCPGNTFSVYARVSSYSNWIES 519
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 0.52
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 2 YSVWVGG--ENNSTSHMREI--SEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNE--R 55
Y+V VG + STS + + S+I HP Y D +ND+ALL+L P+ F+ +
Sbjct: 487 YTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY----NDRRIVNDIALLELATPVQFDSAGK 542
Query: 56 IKALDLPVGTNFKGQRHELVGRVTDAGE-PGSPLVQNNTLTGIASYLEGKDCRK 108
+ + L G+R + G G+ SP + + IAS+ ++CR+
Sbjct: 543 VGTVCLTDQRPAPGKRCYITGWGAINGDTQQSPDILQQAMLPIASH---ENCRR 593
Score = 29.5 bits (63), Expect = 0.91
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 2 YSVWVGG--ENNSTSHMREI--SEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFN 53
Y+V VG + STS + + S+I HP Y D +ND+ALL+L P+ F+
Sbjct: 158 YTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY----NDRRIVNDIALLELATPVQFD 209
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 29.9 bits (64), Expect = 0.69
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 10 NNSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
N T ++S++ HP+Y + +D+ALLKL+K N + + LP
Sbjct: 178 NIGTEQDIKVSKVILHPSY---GKPVTLAHDIALLKLEKSATVNNNVHTVCLP 227
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 29.5 bits (63), Expect = 0.91
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 11 NSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
+ T + + I H NY T D D ALLKL +PL F + ++ + LP
Sbjct: 363 DGTEQVIPVERIISHANYSYNTVDY----DYALLKLTRPLNFTQYVQPVCLP 410
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.5 bits (63), Expect = 0.91
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 11 NSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLP 62
+ T + + I H NY T D D ALLKL +PL F + ++ + LP
Sbjct: 612 DGTEQVIPVERIISHANYSYNTVDY----DYALLKLTRPLNFTQYVQPVCLP 659
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 10 NNSTSHMREISEIYFHPNYVTFTEDEIALN-DVALLKLKKPLIFNERIKALDLP 62
N +R ISEI HP + D + + D+AL+KL I +E ++ + LP
Sbjct: 176 NEPQVQLRNISEIRTHPQF-----DHVLFDADLALIKLDGEAIISEYVRPICLP 224
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 19 ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKAL 59
I I+ HP Y + + + +D+A+L+L++P FN R+ +
Sbjct: 1313 IKAIFVHPQYNSSSHE----HDLAVLQLQQPAEFNSRVSPI 1349
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 27.9 bits (59), Expect = 2.8
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 10 NNSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLPVGTNFK- 68
+N+ + ++ I+ H + + + D+ALL+L++P N+R+ LP +
Sbjct: 8 SNTAEQVIKVKRIFKHSGFSMWRYRD----DIALLQLERPAQLNDRVNVACLPSPGDVPP 63
Query: 69 -GQRHELV--GRVTDAGEPGSPLVQNNTLTGIASYLEGKDCRK 108
G + L GR D+ P ++Q + IAS+ +DC++
Sbjct: 64 VGSKCWLTGWGRQVDSSGPLPDILQQARIP-IASH---EDCKR 102
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 39 NDVALLKLKKPLIFNERIKALDLP 62
ND+ALL+L++P++ N + + LP
Sbjct: 33 NDIALLELERPVLTNPHVSPVCLP 56
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 10 NNSTSHMREISEIYFHPNYVTFTEDEIA----LNDVALLKLKKPLIFNERIKAL 59
N S R + I H +Y + + I + D+AL++L +P++FN ++ +
Sbjct: 94 NESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRPVVFNFHVQPI 147
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 6 VGGENNSTSHMREISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDLPVGT 65
VGG + S R I E + + +T E E+A+ A++ + P + + R+ A +
Sbjct: 1293 VGGFSQSVHLRRAIVEAFPNKRILTPRESELAIIKGAVMFAQNPNLLSARVMARTYGIDI 1352
Query: 66 NFK 68
N K
Sbjct: 1353 NEK 1355
>SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32)
Length = 373
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 64 GTNFKGQRHELVGRVTDAGEPGSPLVQNNTLTGIASYLEG 103
GT+ G H++ GRV D+ GS +N + G A+ +G
Sbjct: 179 GTSTNGASHKVPGRVGDSPIAGSGAYVDNEVGGAAATGDG 218
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 27.1 bits (57), Expect = 4.9
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 2 YSVWVGGENNSTSHMRE----ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIK 57
Y V +G + T+ E + I HP+Y + D NDVALL+L +P +
Sbjct: 113 YRVVLGDVDRDTTEGSEQIFHVRRIIKHPHY---SRDVPYDNDVALLQLSRPAFVTSFVN 169
Query: 58 ALDLP 62
+ LP
Sbjct: 170 TVCLP 174
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 26.6 bits (56), Expect = 6.4
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 19 ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIFNERIKALDL-----PVGTNFKGQRHE 73
+S + HP+Y T +D+AL++L KP + N+ + L P+ K
Sbjct: 212 LSRVITHPSYHKPTR---YAHDIALIELAKPAVINKAVGLACLADPSFPIDDGKKCWVTG 268
Query: 74 LVGRVTDA--GEPGSPLV-QNN---TLTGIASYLEGKDCR-KSTLNFFMSMLQYAEWIKA 126
L D+ G+ G P+V +NN L G+ S+ G C + + + EWI++
Sbjct: 269 LDEGGIDSCQGDSGGPMVCENNGRFYLDGVVSW--GHGCAGRGKFGVYAKVRYVKEWIES 326
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 19 ISEIYFHPNYVTFTEDEIALNDVALLKLKKPLIF 52
++++ HP+Y + + +D+ALLKL KP+++
Sbjct: 83 VTKVITHPSY---HKPKTYSHDIALLKLDKPVLY 113
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 39 NDVALLKLKKPLIFNERIKALDLP 62
NDVALLKL P+ ++++ + LP
Sbjct: 162 NDVALLKLDNPIQPSDKVNTVCLP 185
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,531,535
Number of Sequences: 59808
Number of extensions: 180426
Number of successful extensions: 382
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 353
Number of HSP's gapped (non-prelim): 43
length of query: 130
length of database: 16,821,457
effective HSP length: 75
effective length of query: 55
effective length of database: 12,335,857
effective search space: 678472135
effective search space used: 678472135
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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