GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002204-TA|BGIBMGA002204-PA|undefined
         (100 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3056|AAN13888.1|  361|Drosophila melanogaster CG31431-P...    28   2.3  
AE014297-3339|AAF56145.1|  540|Drosophila melanogaster CG10168-P...    26   9.4  

>AE014297-3056|AAN13888.1|  361|Drosophila melanogaster CG31431-PA
           protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)

Query: 28  DDEKETTYRRYESYLLFIITCILAAI------LYLLWKRCKMNYGRYMRRELQE 75
           +DE   T  R E  LLF++   LA +       YLL+KRC + +G   R +  E
Sbjct: 294 EDEGVPTSDRREFLLLFLMPLGLALLPLTVWFSYLLYKRCSVGHGDCQRIDSDE 347


>AE014297-3339|AAF56145.1|  540|Drosophila melanogaster CG10168-PA
           protein.
          Length = 540

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 35  YRRYESYLLFIIT--CILAAILYLLWKRCKMNYGRYMRRELQE 75
           Y R +S L F +   C+  ++++L W+  + N  R+ R + +E
Sbjct: 481 YYRLDSILTFGVRLGCVCGSLIFLGWRLYQKNRNRHTRLQERE 523


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.328    0.141    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,515,261
Number of Sequences: 52641
Number of extensions: 101625
Number of successful extensions: 230
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 229
Number of HSP's gapped (non-prelim): 2
length of query: 100
length of database: 24,830,863
effective HSP length: 73
effective length of query: 27
effective length of database: 20,988,070
effective search space: 566677890
effective search space used: 566677890
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 54 (25.8 bits)