Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002203-TA|BGIBMGA002203-PA|IPR002078|Sigma-54 factor,
interaction region, IPR003577|Ras small GTPase, Ras type,
IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small GTPase, Rho
type, IPR005225|Small GTP-binding protein domain, IPR013753|Ras
(167 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 5e-37
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 130 4e-31
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 1e-28
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 2e-27
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 115 2e-26
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 111 4e-25
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 110 7e-25
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 106 8e-24
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 104 4e-23
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 8e-23
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 102 2e-22
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 99 2e-21
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 94 5e-20
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 93 1e-19
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 93 1e-19
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 91 4e-19
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 4e-18
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 79 1e-15
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 78 4e-15
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 77 6e-15
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 77 7e-15
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 72 2e-13
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 69 3e-12
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 68 3e-12
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 66 1e-11
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 65 3e-11
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 64 6e-11
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 63 1e-10
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 63 1e-10
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 63 1e-10
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 61 4e-10
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 58 5e-09
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 57 9e-09
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 9e-09
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 53 1e-07
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 52 2e-07
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 52 2e-07
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 4e-07
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 51 4e-07
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 50 1e-06
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 50 1e-06
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 48 3e-06
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 48 4e-06
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 47 7e-06
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 7e-06
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 46 1e-05
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 46 1e-05
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 44 5e-05
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 44 5e-05
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 44 6e-05
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 44 9e-05
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 42 2e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 42 3e-04
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 41 5e-04
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 40 8e-04
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 40 0.001
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 40 0.001
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 39 0.002
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 38 0.003
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 38 0.006
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 37 0.010
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 36 0.013
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 35 0.030
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 35 0.030
SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.052
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.069
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 33 0.091
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.091
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 32 0.28
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 32 0.28
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.37
SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42) 31 0.37
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 0.64
SB_214| Best HMM Match : Arf (HMM E-Value=0) 31 0.64
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 30 0.85
SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26) 29 1.5
SB_39674| Best HMM Match : Recep_L_domain (HMM E-Value=7.1) 29 1.5
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 28 3.4
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 28 3.4
SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) 28 4.5
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 27 6.0
SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_11281| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 27 7.9
SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 150 bits (364), Expect = 5e-37
Identities = 70/123 (56%), Positives = 90/123 (73%)
Query: 6 DCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWD 65
D + LKIL++GESGVGKSS++L FT + ATIGVD+ K + V G K KL IWD
Sbjct: 4 DVLTTLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWD 63
Query: 66 TAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNK 125
TAGQER+RTLT S+YR A G ILVYD + +T KL EW+ E+++Y+T K+IV ++VGNK
Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNK 123
Query: 126 IDK 128
IDK
Sbjct: 124 IDK 126
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 130 bits (315), Expect = 4e-31
Identities = 58/118 (49%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
K+LL+G+SGVGKSS++L F + + +TIGVD+ + + V+G +KL IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDKI 129
+RTLTT++YR AHG +L+YDV+E +T L++W+EE+ Y + + ++VGNK D I
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYAC-EGVNTILVGNKCDLI 126
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 122 bits (295), Expect = 1e-28
Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 6 DCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWD 65
+C K+L++G+ GVGK+S+I FTKG + +T+GVD +++D++G +VKL WD
Sbjct: 7 NCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWD 66
Query: 66 TAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNK 125
TAGQE++R +T S+YR A ILV+D++ T A + +W+ +Q Y TNKNI+ ++VGNK
Sbjct: 67 TAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKY-TNKNILKVLVGNK 125
Query: 126 ID 127
D
Sbjct: 126 TD 127
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 118 bits (285), Expect = 2e-27
Identities = 53/116 (45%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
KI+L+G++ VGK+ ++ FTKG + TIGVD+ K +DV+G KVKL IWDTAGQER
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
+R++T S+Y A G I+ YD++ K+ L +W+++ Y T+K+++ +VGNK D
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRY-TSKDVLIAIVGNKSD 123
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 115 bits (277), Expect = 2e-26
Identities = 51/116 (43%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
KI+L+G+SGVGKSS++ FT+ ++ + +TIGV++ + + V G +K +WDTAGQER
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
YR +T+++YR A GA+LVYD+++ KT + W+ E++ + + IV ++VGNK D
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREH-ADPTIVVMLVGNKCD 128
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 111 bits (266), Expect = 4e-25
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Query: 4 TMDCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGI 63
TM + + K++LLGES VGKSS++L F KG + +TIG + + + ++ VK I
Sbjct: 15 TMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 64 WDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVG 123
WDTAGQERY +L +YR A AI+VYD++ T A+ WV+ELQ + NIV + G
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQ-RQASPNIVIALSG 133
Query: 124 NKID 127
NK D
Sbjct: 134 NKAD 137
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 110 bits (264), Expect = 7e-25
Identities = 45/120 (37%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNG-LKVKLGIWDTAG 68
+ +I+L+G+S VGKSS++ FT+G + T+GVD++ +++++ G +++KL IWDTAG
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 69 QERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDK 128
QER+R++T S+YR G +++YD++ + + +W +E + +V ++VG+KIDK
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDK 132
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 106 bits (255), Expect = 8e-24
Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 2/118 (1%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
K+L+LG+ VGKSS+I F ++ AQ TIGVD+ D++G KVKL +WDTAG+E+
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNE-WVEELQVYTTNKNIVCLVVGNKIDK 128
YR L+ SF+R A GA+LV+DVS ++ + + W+ E + + + ++VGNK DK
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFH-KVSGSDTITILVGNKCDK 128
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 104 bits (249), Expect = 4e-23
Identities = 45/116 (38%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
K++ +G+SGVGKSS + F ++ F ATIGVD+ K M+VNG + + +WDTAGQER
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQER 957
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
+R++T ++R+A G ++ YDV+ + L +W+ ++ + + +V+GNK D
Sbjct: 958 FRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVE-EGAEEGVAKMVLGNKTD 1012
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 103 bits (247), Expect = 8e-23
Identities = 54/137 (39%), Positives = 85/137 (62%), Gaps = 22/137 (16%)
Query: 12 KILLLGESGVGKSSIILAFTKG---------------------DYQAQFPATIGVDYNHK 50
K+LL+G+SGVGKS ++L F Y + +TIGVD+ +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 51 IMDVNGLKVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQV 110
++++G +KL IWDTAGQER+RT+T+S+YR AHG I+VYDV++ ++ + +W++E+
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 129
Query: 111 YTTNKNIVCLVVGNKID 127
Y +N+ L+VGNK D
Sbjct: 130 YAC-ENVNKLLVGNKCD 145
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 102 bits (244), Expect = 2e-22
Identities = 51/124 (41%), Positives = 78/124 (62%), Gaps = 7/124 (5%)
Query: 35 YQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSE 94
+ + TIGVD+ + ++++G KVKL IWDTAGQER+RT+T+++YR HG I+VYDV+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 95 PKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID----KIIETPGLWEKDTSASNIRVTEE 150
T + W+ E+ +++ ++VGNK D K++ET L +K NIRV E
Sbjct: 62 ADTFVNVKRWLHEID--QNCDDVIRILVGNKDDCPSKKVVETADL-QKFGEQMNIRVFET 118
Query: 151 EARE 154
A+E
Sbjct: 119 SAKE 122
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/116 (38%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
KI+L G++ VGKSS IL + + + +T+GVD+ K + V+G L +WDTAGQER
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQER 503
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
+R++ S++R+A G +L+YDV+ + + +WVE ++ + +K + ++ GNKID
Sbjct: 504 FRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIE-ESCSKPVPIMLCGNKID 558
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 94.7 bits (225), Expect = 3e-20
Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
KI+ LG+ GVGKSS+ F ++ ++ TIG+D+ K + ++ +V+L IWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDKIIE 131
+R L S+ R++ A++V+D++ + + +WV+ ++ K ++ ++VGNK+D
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVI-IIVGNKMD---- 279
Query: 132 TPGLWEKDTSASNIRVTEEEAREQGGSCYETT 163
E D + V E+ A G S ET+
Sbjct: 280 -----ESDRRKVSYDVAEKSAERLGLSYVETS 306
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 94.3 bits (224), Expect = 5e-20
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 42 TIGVDYNHKIMDVNGLKVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKL 101
TIGV++ KI++V G VKL IWDTAGQER+R++T S+YR A GA+LVYD+S +T L
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
Query: 102 NEWVEELQVYTTNKNIVCLVVGNKID 127
W+ + + + NIV ++VGNK D
Sbjct: 187 TNWLTDART-LASPNIVIILVGNKKD 211
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 93.1 bits (221), Expect = 1e-19
Identities = 42/117 (35%), Positives = 72/117 (61%), Gaps = 11/117 (9%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIM-----------DVNGLKV 59
+K L LG+SGVGK+S++ +T + +F TIG+D+ K + G ++
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 60 KLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKN 116
L +WDTAGQER+R+LTT+F+R+A G +LV+D++ ++ + W+ +LQ + +N
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYCEN 223
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 92.7 bits (220), Expect = 1e-19
Identities = 39/92 (42%), Positives = 63/92 (68%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
K+L++G S VGK+S + + + + F +T+G+D+ K + N +VKL IWDTAGQER
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNE 103
YRT+TT++YR A G IL+YD++ ++ + +
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAVQD 114
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 91.1 bits (216), Expect = 4e-19
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
K++LLGE+GVGK+S+ + + TIG+D K + + +V L +WDTAG ER
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
+RT+T ++YR AH IL+++V +P +L L W+ + + + + ++V NKID
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFC--PDALKVLVANKID 126
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 90.6 bits (215), Expect = 6e-19
Identities = 40/121 (33%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
KI+++G+S VGK+ + G + + TIGVD+ K +++NG VKL +WDTAGQER
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQER 107
Query: 72 YR-TLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDKII 130
+R ++ +YR + + +YD++ + L W+ E + + + ++ +++GNK D +
Sbjct: 108 FRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGL 167
Query: 131 E 131
E
Sbjct: 168 E 168
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 87.8 bits (208), Expect = 4e-18
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 15 LLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQERYRT 74
L + GVGKSS++ F G + Q TIGV++ +K + ++G L IWDTAGQER+++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 75 LTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYT---TNKNIVCLVVGNKID 127
L T FYR + +LVY V + K+ L+ W +E Y N +++GNK+D
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVD 331
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 79.4 bits (187), Expect = 1e-15
Identities = 33/72 (45%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 56 GLKVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNK 115
G K+KL IWDTAGQER+ T+TT++YR A G +LVYDV+ K+ + +++W++++ + N+
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDH-ANE 60
Query: 116 NIVCLVVGNKID 127
++ ++VGNK D
Sbjct: 61 DVKRMLVGNKCD 72
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 77.8 bits (183), Expect = 4e-15
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 1 MSLTMDCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVK 60
+SL+ C+ + L +G+ G GK++ + G+++ ++ AT+GV+ + I + +K
Sbjct: 24 VSLSCHCIV-VSFLQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIK 82
Query: 61 LGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCL 120
+WDTAGQE++ L +Y + AI+++DV+ T + W +L+ +NI +
Sbjct: 83 FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLE--RVCENIPIV 140
Query: 121 VVGNKID 127
+ GNK+D
Sbjct: 141 LCGNKVD 147
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 77.4 bits (182), Expect = 6e-15
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 51 IMDVNGLKVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQV 110
+M VN K IWDTAGQER+++L +YR+A AILVYD++ T L W+ ELQ
Sbjct: 1 MMIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQR 60
Query: 111 YTTNKNIVCLVVGNKIDK 128
Y ++IV V GNK DK
Sbjct: 61 YGP-QDIVIAVAGNKCDK 77
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 77.0 bits (181), Expect = 7e-15
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 47 YNHKIMDVNGLKVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVE 106
YN+ + DV KL IWDTAGQER+RT+T S+YR +G I+ YD+++ T + W E
Sbjct: 88 YNNSLQDV-----KLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGE 142
Query: 107 ELQVYTTNKNIVCLVVGNKID 127
++Q Y +N + L+VGNK D
Sbjct: 143 DVQKYAP-ENAIKLLVGNKKD 162
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 72.1 bits (169), Expect = 2e-13
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQF-PATIGV-DYNHKIMDVNGLKVKLGIWDTA 67
+ K L++G SGVGKS ++ + +F +T+ + D + + K+KL I DTA
Sbjct: 350 EFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTA 409
Query: 68 GQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYT-TNKNIVCLVVGNKI 126
GQERY ++ +++R G LV+D++ T +L+ W++ + + + NI ++VGNK
Sbjct: 410 GQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKK 469
Query: 127 D 127
D
Sbjct: 470 D 470
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 69.7 bits (163), Expect = 1e-12
Identities = 38/127 (29%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 2 SLTMDCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKL 61
+L M + K K++++G+ GK+ +++ F+K + + T+ +Y I +V+G +V+L
Sbjct: 5922 ALAMAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQVEL 5979
Query: 62 GIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNE-WVEELQVYTTNKNIVCL 120
+WDTAGQE Y L Y + ++ + + P +L + E W E++ + N I+
Sbjct: 5980 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII-- 6037
Query: 121 VVGNKID 127
+VGNK D
Sbjct: 6038 LVGNKKD 6044
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 68.9 bits (161), Expect = 2e-12
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMD-VNGLKVKLGIWDTAGQE 70
K+L++G+ GK S + + + + TIGVD+ K + ++L IW AGQE
Sbjct: 20 KVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQE 79
Query: 71 RYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQ---VYTTNKNIVCLVVGNKID 127
R+ ++T +Y+ A ++++D+ TL +W ++L + K + C++VGNK D
Sbjct: 80 RFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVGNKSD 139
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 68.5 bits (160), Expect = 3e-12
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 64 WDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVG 123
W+ AGQER+RT+T+S+YR AHG ++VYD+++ ++ L++W+ E++ Y ++ + ++VG
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETY-ASEGVHMILVG 431
Query: 124 NKID 127
NKID
Sbjct: 432 NKID 435
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 68.1 bits (159), Expect = 3e-12
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 9 AKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAG 68
A ++++LG GVGK+S++ F G + Q+ T+G Y + L I DTAG
Sbjct: 106 AVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAG 165
Query: 69 QERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDK 128
+ + + A +LVY V E +L + E E+ VY K + ++VGNK D
Sbjct: 166 SYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREI-VYIKGKTVPMVLVGNKTDL 224
Query: 129 IIE 131
+ E
Sbjct: 225 VSE 227
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 66.1 bits (154), Expect = 1e-11
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
K+++LG GVGKS++ + F G + ++ TI D+ K ++V+ L I DTAG E+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTEQ 63
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
+ ++ + + G +LVY + +T A L ++ ++N+ ++VGNK D
Sbjct: 64 FASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSD 119
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 64.9 bits (151), Expect = 3e-11
Identities = 33/119 (27%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
++ ++L+G+S GK++++ A+ + + ++ AT+ + + +V+G +++L +WDT+G
Sbjct: 232 RIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAV-EVDGERIELTLWDTSGH 290
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTL-AKLNEWVEELQVYTTNKNIVCLVVGNKID 127
E Y + Y ++ +D+S PKT + L +W+ E+ NK + L+VG K D
Sbjct: 291 EDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPV--LLVGCKQD 347
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 64.1 bits (149), Expect = 6e-11
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 63 IWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNK---NIVC 119
IWDTAGQER+++L +FYR A +LV+DV++P + L+ W +E + + + N
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 120 LVVGNKID 127
+V+GNKID
Sbjct: 61 VVLGNKID 68
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNH-KIMDVNGLKVKLGIWDTAGQE 70
KI L G+ GVGK+SI + ++ + + +D ++ + K+K+ +WDT G E
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 71 RYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
Y +LT + Y + ++VY + P +LA++ E + QV IV +V NK+D
Sbjct: 70 EYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAKIV--LVANKMD 124
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/59 (44%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 69 QERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
QERYR +T+++YR A GA+LVYD+++ + LN+WVEEL+ + ++ ++ +++GNK D
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASD-DLSIILIGNKSD 59
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 62.9 bits (146), Expect = 1e-10
Identities = 40/147 (27%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQE 70
+K++++G+ GVGKS+ ++ T + ++ T+ +Y+ IM ++G +G+WDTAGQE
Sbjct: 6 VKLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIM-LDGKAYNVGLWDTAGQE 64
Query: 71 RYRTLTTSFYREAHGAILVYDVSEPKTLAKL-NEWVEELQVYTTNKNIVCLVVGNKIDKI 129
Y L Y ++ +D+ + + ++W+ EL + + +VGNK D
Sbjct: 65 DYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKI--LVGNKRD-- 120
Query: 130 IETPGLWEKDTSASNIRVTEEEAREQG 156
+ + +++TS SN R + E+G
Sbjct: 121 LRSA---QQNTSLSNHRSRDPITYEEG 144
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/59 (44%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 69 QERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
QERYR +T+++YR A GA+LVYD+++ + LN+WVEEL+ + ++ ++ +++GNK D
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASD-DLSIILIGNKSD 59
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 61.3 bits (142), Expect = 4e-10
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 6 DCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWD 65
D + K++++G GVGKS++ + F + + + + TI Y + + ++ L I D
Sbjct: 7 DVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDILD 65
Query: 66 TAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNK 125
TAGQE + + + R G +LV+ V++ + ++N++ ++ ++ GNK
Sbjct: 66 TAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNK 125
Query: 126 ID 127
D
Sbjct: 126 SD 127
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 59.7 bits (138), Expect = 1e-09
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTA 67
KI+L+G+SGVGKS+++ +TK ++ ATIGV+ H+ +++ G V+ IWDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 58.0 bits (134), Expect = 4e-09
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQE 70
+K +++G+ VGK+ +++++T + +++ T+ +Y +M + G LG++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 62
Query: 71 RYRTLTTSFYREAHGAILVYDVSEPKTLAKLNE-WVEELQVYTTNKNIVCLVVGNKID 127
Y L Y + ++ + V P + + E WV E+ + L+VG ++D
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF--LLVGTQVD 118
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 57.6 bits (133), Expect = 5e-09
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+LK +++G+ GVGK+S+++++ + + T D H ++VN + DTAGQ
Sbjct: 18 QLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEFCDTAGQ 76
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKL-NEWVEELQVYTTNKNIVCLVVGNKIDK 128
E + L Y A I+ + V P + A + ++W+ E++ + I+ + + +
Sbjct: 77 EDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKD 136
Query: 129 IIE-TPGLWEKDTSASNIRVTEEEAREQGGSCYETTCSI 166
+ L ++D+ +++ E ++ CY T S+
Sbjct: 137 CYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSV 175
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 56.8 bits (131), Expect = 9e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDT 66
K++L+G+SGVGKS+++ FT+ ++ + +TIGV++ + + V+G +K IWDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 56.8 bits (131), Expect = 9e-09
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 5 MDCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVN-----GLKV 59
M V K++I ++G+SGVGK+S++ + + TIG K+ D G
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTF 60
Query: 60 KLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEEL 108
L WD G + + FY +G ILV+D++ K+ L +W+ E+
Sbjct: 61 FLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
KLK++L G++ VGK+S ++ T+ + + A + ++V K L +WDT G
Sbjct: 6 KLKVVLTGDNNVGKTSFLINLTQNELEGTPTAFANYELG---LEVGSQKFLLDLWDTEGT 62
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKL-NEWVEELQVYTTNKNIVCLVVGNKID 127
Y L Y+ + +L +D+S +T ++ ++W+ E + +++GNK D
Sbjct: 63 TEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGS--IRVLIGNKND 119
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 8 VAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTA 67
V + +IL+LG G GKS + A ++GD + T +N + +GL L IW+
Sbjct: 164 VPEKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLN--LNIWEIG 221
Query: 68 GQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
G E+YR +F + + V D S+P + + ++ L + + L+V +K D
Sbjct: 222 GDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQD 281
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ-E 70
+I LLG+ GVGK+++++ F + ++ TI Y K ++++ + V L I DTA + +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILDTASRGQ 65
Query: 71 RYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQV 110
L F RE G I+VY ++ T A L+ + + +++
Sbjct: 66 NSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKL 105
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
KI ++G VGKSS+ + F +G + + TI + I G + L + DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIK-YKGQEFFLELVDTAGQDE 66
Query: 72 YRTLTTSFYREAHGAILVYDVSEPK 96
Y S+ HG ILVY V+ K
Sbjct: 67 YSIFPQSYSMGIHGYILVYAVTSAK 91
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 51.2 bits (117), Expect = 4e-07
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+++IL++G GK++I+ G+ P TIG + + V + +WD GQ
Sbjct: 17 QMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFN----VESVEYKNISFTVWDVGGQ 71
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
++ R L +++ G I V D ++ + + + E + ++ K+ V LV+ NK D
Sbjct: 72 DKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQD 129
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 51.2 bits (117), Expect = 4e-07
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+ I+ G S VGK+S+IL F + + TI D+ K + N +L I DT+G
Sbjct: 28 RFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGT 86
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDKI 129
+ + + +LVY P++ KLN + E+ N++ C+VV NK D
Sbjct: 87 YEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRH-PCIVVCNKNDLP 145
Query: 130 IET 132
+ T
Sbjct: 146 LAT 148
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+L++L++G GK++I L K D TIG +N ++++ +K +WD GQ
Sbjct: 90 ELRLLMVGLDAAGKTTI-LYHLKLDEPVNTIPTIG--FNVEVVEYKN--IKFTVWDIGGQ 144
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
++ R L +++E G I V D ++ + + E + +L K LV+ NK D
Sbjct: 145 DKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQD 202
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+++IL++G GK++I+ G+ P TIG + + V + +WD GQ
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFN----VETVEYKNISFTVWDVGGQ 71
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
++ R L +++ G I V D ++ + + + E + + ++ V LV NK D
Sbjct: 72 DKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQD 129
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 48.8 bits (111), Expect = 2e-06
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 12 KILLLGESGVGKSSII--LAFTKGDYQAQ--FPATIGVDYNHKIMDVNGLKVKLGIWDTA 67
K++L+G++GVGKS +I L T +Q + T G H L + DT+
Sbjct: 15 KVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTG---GHASYFTASNSCHLYLLDTS 71
Query: 68 GQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEE-LQVYT-TNKNIVCLVVGNK 125
G E YR LT + + + + +++P +L+ L +W + L V+ + ++ V+G K
Sbjct: 72 GLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVLKFVLGCK 131
Query: 126 ID 127
ID
Sbjct: 132 ID 133
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
K+++LG GVGKS++ + F G + ++ TI D+ H TAG E+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYH----------------TAGTEQ 47
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
+ ++ + + G +LVY + +T A L ++ ++N+ ++VGNK D
Sbjct: 48 FASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSD 103
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 58 KVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNI 117
K K I DTAGQE Y + + R G + V+ V+ K+ +N++ E+++ + +
Sbjct: 276 KSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEV 335
Query: 118 VCLVVGNKID 127
++VGNK D
Sbjct: 336 PMVLVGNKCD 345
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 47.2 bits (107), Expect = 7e-06
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 63 IWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVV 122
+WDT G E Y +LT + Y + ++VY + P +LA++ E + QV IV +V
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAKIV--LV 60
Query: 123 GNKID 127
NK+D
Sbjct: 61 ANKMD 65
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 47.2 bits (107), Expect = 7e-06
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 13 ILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQERY 72
++LLG++GVGKS++++ F G + ++ T+ + Y+ ++ L I DTA
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVS-ATIDEDPATLHITDTAS---- 184
Query: 73 RTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVV--GNKID 127
T + + G I+VY ++E +T + V+ ++ K + L+V GNK D
Sbjct: 185 -TYEPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCD 240
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 46.4 bits (105), Expect = 1e-05
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
++++ L+G GK++ + G + T+G +N + + + +K +WD GQ
Sbjct: 20 EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGNVTIK--VWDIGGQ 75
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDKI 129
R+R++ + R + + + D ++ L + L I LV+GNK D
Sbjct: 76 PRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKD-- 133
Query: 130 IETPGLWEKDTSASNIRVTEEEAREQGGSCYETTCSIK 167
P ++ + +T + RE CY +C K
Sbjct: 134 --LPNSLDEKELVERLNLTSVQDREI--CCYSISCKEK 167
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 79 FYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
+YR A GA+LVYD+++ T + W++EL+ + + NIV ++VGNK D
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDH-ADSNIVIMLVGNKSD 49
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+++I++LG GK++I+ + + P TIG +N + + V L IWD GQ
Sbjct: 19 QVRIVMLGLDAAGKTTILYKLKLKETVSTIP-TIG--FNVETLQPTK-NVTLTIWDVGGQ 74
Query: 70 ERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
++ R L +++ G + V D S+ + + E + + +++ +VV NK D
Sbjct: 75 DKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQD 132
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 52 MDVNGLKVKLGIWDTAGQERY-----RTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVE 106
+++ G V L I DT G+ R + YR GA++V+DV++ K+ ++ W++
Sbjct: 10 LELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLD 69
Query: 107 ELQVYTTNKNIVCLVVGNKIDK 128
++Q + ++ I ++VGNK D+
Sbjct: 70 KVQEHCGHE-IPVVLVGNKTDR 90
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 44.0 bits (99), Expect = 6e-05
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 12 KILLLGE-SGVGKSSIILAFTKGDYQAQF--PATIGVD-YNHKI--MDVNGLK---VKLG 62
KI+ +G+ +G GK L+ + F TIGVD Y H I + + K VKL
Sbjct: 52 KIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKKKDSTVKLQ 111
Query: 63 IWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVV 122
WD A ER+ +T + R GA++ + P L+ +W E+++ + + LVV
Sbjct: 112 FWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEKVKEANSGSVPMVLVV 171
Query: 123 GN 124
N
Sbjct: 172 EN 173
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 43.6 bits (98), Expect = 9e-05
Identities = 26/124 (20%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 5 MDCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIW 64
M+ LK+ ++G+ VGK+++ + + ++ T +V+G+K + ++
Sbjct: 1 MEDYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLF 60
Query: 65 DTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLN-EWVEELQVYTTNKNIVCLVVG 123
D+AG E + L Y ++ +D++ + + W+ EL + + + ++VG
Sbjct: 61 DSAGGEDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHF--SPGVPRVLVG 118
Query: 124 NKID 127
NK D
Sbjct: 119 NKKD 122
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 43.6 bits (98), Expect = 9e-05
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 49 HKIMDVNGLKVKLGI-WDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEE 107
H D L + + I DTAG+E+Y L++ + R A AI+ YD+++ +L LN+
Sbjct: 261 HLFADNGNLGINVTISMDTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLH 320
Query: 108 LQVYTTNKNIVCLVVGNKIDKIIE 131
L + N + ++VG K D + +
Sbjct: 321 L-LQAAEPNCLVVIVGCKKDLVTD 343
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 15 LLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQERYRT 74
++G GK++I+ + + P T+G + + V + +WD GQ++ R
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVP-TLGFN----VETVTYKNISFTVWDIGGQDKIRA 55
Query: 75 LTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
L +Y+ G I V D ++ + + + +L + ++ LV+ NK D
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQD 108
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQE 70
+++++LG+ GVGKS++ + F + ++ T+ + H I+ ++ V L I DTAG+
Sbjct: 17 VRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRH-ILQIDNEDVSLDISDTAGEV 75
Query: 71 RYR 73
R R
Sbjct: 76 RVR 78
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 41.1 bits (92), Expect = 5e-04
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
KI +LG GVGK+S++ F + + T+ DY ++++G+ I DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTYA 72
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEEL-----QVYTTNKNIVCLVVGNKI 126
+ + I+V+ ++ + + E ++E+ + + K I+ +V NK+
Sbjct: 73 FPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANKL 132
Query: 127 D 127
D
Sbjct: 133 D 133
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
++ ++G GVGKSS+ + + K ++ +DY K+ D+ + DTAGQE
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTE-------IDYCGKLYDIE-------VVDTAGQEE 2645
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEW----VEELQVYTTNKNIVCLVVGNKI 126
Y + S ++++ ++ + +L + + E + T I ++VGNK+
Sbjct: 2646 YTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVGNKM 2704
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 10 KLKILLLGESGVGKSSII--LAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTA 67
++K++LLGESG GK+S L + Q T+GV + ++ +GL+V+ + D A
Sbjct: 260 RIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDGLEVQ--VVDCA 317
Query: 68 GQERYRTLTTSFYREAHGAILVYDVSEPK 96
GQ RY+ F E +LV ++ K
Sbjct: 318 GQRRYQLTHPFFLSEEALHLLVINLHSYK 346
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 59 VKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIV 118
+ +WD GQ++ R L +++ A G I V D ++ + + ++ E + + ++ +
Sbjct: 154 ITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNGVP 213
Query: 119 CLVVGNKID 127
+VV NK D
Sbjct: 214 VVVVANKQD 222
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/45 (31%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 83 AHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
A G +LVYD+++ KT +++W+ ++ + N+++ +++GNK D
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEH-ANEDVEKMILGNKCD 168
Score = 33.5 bits (73), Expect = 0.091
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATI 43
K+LL+G+SGVGK+ I+ F+ + F +TI
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 51 IMDVNGLKVKLGIWDTAGQERYRTLTTSFYR 81
I NG ++L +WDTAGQE + +T ++YR
Sbjct: 26 IQSANGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQER 71
+I + G +GVGK+SI+ F G + ++ T+ Y+ K+++ NG + L D++G +
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYS-KVLNKNGSIMVLNTTDSSGSYQ 68
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNK 115
+ + + A G D+ E + ++ + V+E+ + K
Sbjct: 69 FPAMREVAIKRASGN--KKDLEEQREVSS-EQVVKEVMAFAREK 109
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 79 FYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTN----KNIVCLVVGNKID 127
FY++ GA+LVYDV+ ++ L+ W++E++ + ++V +V NK+D
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD 62
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 59 VKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIV 118
+ +WD GQ++ R L +++ G I V D ++ + + E + + ++ V
Sbjct: 510 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRDAV 569
Query: 119 CLVVGNKIDKIIET 132
LV NK +ET
Sbjct: 570 LLVFANKQLFCVET 583
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKL--GIWDTAG 68
+K++L+G GK++++ + AT G+ + + L + IWD G
Sbjct: 552 MKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDFGG 611
Query: 69 QERYRTLTTSFYREAHGAILVYDVSE-PKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
QE Y F ILV+++ E + A+L W++ + ++V +VG +D
Sbjct: 612 QEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARAPGSSLV--IVGTHLD 669
Query: 128 KI 129
+I
Sbjct: 670 RI 671
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 36.7 bits (81), Expect = 0.010
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
L + +LG+ GVGKS+ + + ++ + ++Y H M+++G + L + DTAG+
Sbjct: 182 LSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHS-MEIDGQYLALDVLDTAGK 239
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+K++++GE GVGKS++ + F + ++ T+ Y +V G V + + DTAG+
Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQD-AEVAGEVVAIELTDTAGE 919
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 36.3 bits (80), Expect = 0.013
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 80 YREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
Y + G +LVYD++ K+ K W+ ++ + ++++ +V+GNK D
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEH-ASQDVEKMVLGNKCD 128
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 35.1 bits (77), Expect = 0.030
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 79 FYREAHGAILVYDVSEPKTLAKLNEWVEELQ 109
FY++ GA+LVYDV+ ++ L+ W++E++
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIK 35
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 35.1 bits (77), Expect = 0.030
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 13 ILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYN-HKIMDVNGLKVKLGIWDTAGQER 71
+++LG GK+SI+ +Y P T +N I G++ K +WD G+E+
Sbjct: 24 VVMLGLDKSGKTSILYRNKFREYVNTVPTTA---FNVETIRPFKGIRFK--VWDIGGREQ 78
Query: 72 YRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
R L ++ R+ I V D + L + + + L L+ NK D
Sbjct: 79 NRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQD 134
>SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 34.3 bits (75), Expect = 0.052
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 63 IWDTAGQERYRTLTTSFYREAHGAILVYDVSE-PKTLAKLNEWVEELQVYTTNKNIVCLV 121
IWD GQE Y F ILV+++ E + A+L W++ + ++V +
Sbjct: 22 IWDFGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARAPGSSLV--I 79
Query: 122 VGNKIDKI 129
VG +D+I
Sbjct: 80 VGTHLDRI 87
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 33.9 bits (74), Expect = 0.069
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 5 MDCVAKLKILLLGESGVGKSSII--LAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLG 62
+D ++I++LG+S VGK+ ++ L + + +I +Y I+ V+G KL
Sbjct: 13 IDIERNIRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANII-VDGKVYKLE 71
Query: 63 IWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKL-NEWVEELQVYTTNKNIVCLV 121
+ D + T + + + L + V + + + N+W E++ + N I+ V
Sbjct: 72 LCDV---DNLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPII--V 126
Query: 122 VGNKID-KIIETPGLWEKDTSASNIRVTEEEARE 154
VG K D + E +KD + V+ +E R+
Sbjct: 127 VGTKTDLRENENKKRGKKDDDSPTAIVSVKEGRK 160
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 33.5 bits (73), Expect = 0.091
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 79 FYREAHGAILVYDVSEPKTLAKLNEWVEELQ---VYTTNKNIVCLVVGNKIDKIIE 131
+Y+EA GA +V+DV+ T + + +W +L + + I +++ NK D+ E
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKE 765
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATI 43
K+L++G+ GVGK+S+I + + + AT+
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.5 bits (73), Expect = 0.091
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 8 VAKLKILLLGESGVGKSSIILAFTKG--DYQAQFPATIGVDYNHKIMDVNGLKVKLGIWD 65
V + K+L+ G+S VGKS+++ F Y + T+G + K++++
Sbjct: 3 VLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNI----------- 51
Query: 66 TAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQ-VYTTNKNIVCLVVGN 124
T S + + I+ YDVS ++ N+W+E + + ++ N+ ++
Sbjct: 52 -------PETTDSVWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIAT 104
Query: 125 KID 127
K D
Sbjct: 105 KTD 107
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 60 KLGIWDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLA 99
KL IWD GQ R+ +++ G I V D ++ + LA
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLA 42
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATI 43
KL I +LGE VGKSS+I F +Q ++ TI
Sbjct: 27 KLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI 60
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 32.3 bits (70), Expect = 0.21
Identities = 11/43 (25%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 85 GAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
G +LVYD++ + +++W++ ++ + N+ +++GNK+D
Sbjct: 4 GILLVYDITTEDSFKHISQWLQNIE-DNASPNVCKVLLGNKLD 45
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 31.9 bits (69), Expect = 0.28
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIG 44
K +++LG +GVGK+++++ F G + ++ T+G
Sbjct: 324 KYSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQ 69
+++ILLLG GK++I+ + D P T G +N K + G +L +WD GQ
Sbjct: 17 EMRILLLGLDNSGKTTILKSLASEDVLHITP-TQG--FNIKSVQSKG-GFRLNVWDIGGQ 72
Query: 70 ERYRTLTTSFY 80
+ R +++
Sbjct: 73 RKIRPYWKNYF 83
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 31.9 bits (69), Expect = 0.28
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 75 LTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKID 127
++T+ R+ G +LVYD++ K+ L W+E ++ + L+VGNK D
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEI-LLVGNKCD 99
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 6 DCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIG 44
D V L++++LG+ GVGKS++ + + ++ +T+G
Sbjct: 12 DNVRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42)
Length = 275
Score = 31.5 bits (68), Expect = 0.37
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQ--------FPATIGVDYNHKIMDVNGLKVKL 61
+ ++++G SG+GKS+++ KG P T+ V +++ G+++KL
Sbjct: 114 EFNLMVVGASGLGKSTMVNTLFKGKLSRPTSTGKPTIIPKTVDVKSVSHVIEEKGVRLKL 173
Query: 62 GIWDTAG 68
I DT G
Sbjct: 174 TITDTPG 180
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.1 bits (67), Expect = 0.49
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIG 44
K+L++G++ VGK+S + + G+ + ++ TIG
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 30.7 bits (66), Expect = 0.64
Identities = 25/134 (18%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 10 KLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVN-------------G 56
++K++++G G GK++++ A KG +T+G+ + + ++ G
Sbjct: 666 RMKLMVVGIQGYGKTTLLAAL-KGQPLPSNLSTVGIVVDEWSVQISTSLLSRIGITSGIG 724
Query: 57 LKVKLGIWDTAGQERYRTLTTSFYREAHGAILVYDVS-EPKTLAKLNEWVEELQVYTTNK 115
+ L WD AGQ Y F + + V++ + + + L W+ ++
Sbjct: 725 PTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPYS 784
Query: 116 NIVCLVVGNKIDKI 129
+++ ++G +D+I
Sbjct: 785 DVI--IIGTHLDRI 796
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 30.7 bits (66), Expect = 0.64
Identities = 14/64 (21%), Positives = 32/64 (50%)
Query: 64 WDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVG 123
+D G + R + ++ +G + + D ++ + LA+ + ++ L + L++G
Sbjct: 25 FDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLADEQLSSCPVLILG 84
Query: 124 NKID 127
NKID
Sbjct: 85 NKID 88
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIG 44
LK+LL+G+S VGK+ ++L F + Q T G
Sbjct: 13 LKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAG 46
>SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26)
Length = 550
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 133 PGLWEKDTSASNIRVTEEEAREQGGS 158
PG W +T+ N+ E+ EQGGS
Sbjct: 274 PGKWPNNTTTVNLNALNEQQPEQGGS 299
>SB_39674| Best HMM Match : Recep_L_domain (HMM E-Value=7.1)
Length = 390
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/45 (22%), Positives = 26/45 (57%)
Query: 81 REAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNK 125
+E +LV + EP+ + W+E L+ ++ +N+ +++G++
Sbjct: 113 KETENLVLVLNGREPQKVEFAQAWLESLRFFSRLRNVAVILLGSE 157
>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3307
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 71 RYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCL 120
+++ F R G +YD +EP+T+ EW E+ + + CL
Sbjct: 2362 KFKGFRQKFPRTLEGWKKIYDSNEPQTMPLPGEWEEKFDFFQKMVLLRCL 2411
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 3 LTMDCVAKLKILLLGESGVGKSSIILA 29
+T++ AK K+ + G +G GKSS++ A
Sbjct: 853 ITLEITAKQKVGIAGRTGAGKSSLLAA 879
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 103 EWVEELQVYTTNKNIVCLVVGNKIDKIIETPGLWEKDTSASNIRVTEEE 151
EW ++ Q+ T N + VVGN I ET + +D A T +E
Sbjct: 3719 EWFKDDQLITNNDRVRSSVVGNTCTLIFETVNI--QDRGAYRCTATNQE 3765
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 34 DYQAQFPATIGVDYNHKIMDVNGLKVKLGIWD-TAGQERYRTLTTSFYREAHGAILVYDV 92
D AQ T G DY +MD G + D A TL+ S+ +L V
Sbjct: 179 DGLAQLGVTYGTDYGLALMDREGPFTNISRDDWNAAMPSILTLSNSYQAPVQSPVLRIYV 238
Query: 93 SEPKTL 98
S P T+
Sbjct: 239 SAPSTM 244
>SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09)
Length = 1703
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 98 LAKLNEWVEELQ---VYTTNKNIVCLVVGNKIDKIIE-TPGLWEKDTSASNIRVTEEEA 152
+AK+ +EELQ V +N +++ K K +E T L KD +A+NI+ E +A
Sbjct: 766 VAKMQVELEELQPQLVVAAAENDKMMIIIEKESKEVEATSELVRKDEAAANIQAAEAQA 824
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDT 66
K+ +LG S VGK+S++ A K + + TI DY ++ +G+ + + DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1232
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 44 GVDYNHKIMDVNGLKVKLGIWDTAGQERYRTLTTSFYR 81
G+ N + D+ L+ L + + G+ER+ TL + YR
Sbjct: 1157 GLHLNIRTADIVNLRTMLELLNVEGEERHVTLPYAIYR 1194
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 42 TIGVDYNHKIMDVNGLKVKLGIWDTAGQERYRTLTTSF 79
TIG Y K + V +V LGIW +R + F
Sbjct: 618 TIGAAYGTKTVTVRNTRVTLGIWVCRDVGHHRNMVKYF 655
>SB_11281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 77 TSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVGNKIDKII 130
+S Y GA+LV E KT K+ E V Y + + C V NK I
Sbjct: 164 SSLYFILSGAVLVQVAEEDKTTGKITEHVTH---YVRSSLVRCFVKKNKPSSFI 214
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 27.1 bits (57), Expect = 7.9
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 64 WDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVG 123
+D G++ R F E + AIL V PK+ K E V L +TT+ + L
Sbjct: 929 FDANGKQALRGSIERFVEEVNDAILSGRVP-PKS--KTPELVPRLGYHTTDNKLRLLERA 985
Query: 124 NKIDKIIETPGLWEKDTSASNIRVTEEEAREQGGS 158
++ + DTSA V + +ARE+GGS
Sbjct: 986 QAANRRRDQR-TGTDDTSAPT-HVQDLQAREEGGS 1018
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/17 (52%), Positives = 17/17 (100%)
Query: 11 LKILLLGESGVGKSSII 27
LK++L+G++G+GKS++I
Sbjct: 6 LKLVLVGDAGIGKSTLI 22
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 120 LVVGNKID-KIIETPGLWEKDTSASNIRVTEEEAREQGGSCYETTCS 165
LV NK+D +I+E G W K ++ R T R+ ET S
Sbjct: 405 LVHTNKMDYEILELTGKWLKHAHGAHRRTTSSMTRQWSSRSTETAAS 451
>SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 27.1 bits (57), Expect = 7.9
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 23/153 (15%)
Query: 12 KILLLGESGVGKSSIILAFTKGDYQAQFPA-------------TIGVDYNHKIMDVNGLK 58
K+L +G G GK+S I A + + A T+ +DY + +G
Sbjct: 5 KLLFIGPVGAGKTSAIRALCDEHHNLETEAKASDITGLRKATTTVAMDYGCLTLS-DGEA 63
Query: 59 VKLGIWDTAGQERYR----TLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTN 114
V+L + T GQ R+R L + + G + + D + + L + +E
Sbjct: 64 VQL--YGTPGQARFRFMWDLLANNLAADCAGIVFLVDNTRNYPMRDLRYYAQEFAELIAR 121
Query: 115 KNIVCLVVGNKIDKIIETPGLWEKDTSASNIRV 147
K + +VG + +TP L E + I +
Sbjct: 122 KRV---IVGVTRSDLRDTPTLLEYERELEEIGI 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,451,388
Number of Sequences: 59808
Number of extensions: 196094
Number of successful extensions: 630
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 512
Number of HSP's gapped (non-prelim): 117
length of query: 167
length of database: 16,821,457
effective HSP length: 77
effective length of query: 90
effective length of database: 12,216,241
effective search space: 1099461690
effective search space used: 1099461690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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