Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002203-TA|BGIBMGA002203-PA|IPR002078|Sigma-54 factor,
interaction region, IPR003577|Ras small GTPase, Ras type,
IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small GTPase, Rho
type, IPR005225|Small GTP-binding protein domain, IPR013753|Ras
(167 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 109 3e-26
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 68 2e-13
AY146735-1|AAO12095.1| 149|Anopheles gambiae odorant-binding pr... 26 0.52
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 26 0.69
DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein. 23 4.9
X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein... 23 6.4
DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein. 23 6.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 23 6.4
AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha su... 22 8.5
AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha su... 22 8.5
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 109 bits (263), Expect = 3e-26
Identities = 53/124 (42%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 4 TMDCVAKLKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGI 63
T + + + K++LLGES VGKSS++L F KG + +TIG + + + ++ VK I
Sbjct: 18 TQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEI 77
Query: 64 WDTAGQERYRTLTTSFYREAHGAILVYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVVG 123
WDTAGQERY +L +YR A AI+VYD+ + A+ WV+ELQ + NIV + G
Sbjct: 78 WDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQ-RQASPNIVIALAG 136
Query: 124 NKID 127
NK D
Sbjct: 137 NKAD 140
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 67.7 bits (158), Expect = 2e-13
Identities = 34/118 (28%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 11 LKILLLGESGVGKSSIILAFTKGDYQAQFPATIGVDYNHKIMDVNGLKVKLGIWDTAGQE 70
+K +++G+ VGK+ +++++T + ++ T +Y+ ++ V+G++V LG+WDTAGQE
Sbjct: 7 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQE 65
Query: 71 RYRTLTTSFYREAHGAILVYDVSEPKTLAKL-NEWVEELQVYTTNKNIVCLVVGNKID 127
Y L Y + ++ Y V+ P + + ++W E++ + + I+ +VG KID
Sbjct: 66 DYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPII--LVGTKID 121
>AY146735-1|AAO12095.1| 149|Anopheles gambiae odorant-binding
protein AgamOBP25 protein.
Length = 149
Score = 26.2 bits (55), Expect = 0.52
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 107 ELQVYTTNKNIVCLVVGNKIDKIIETPGLWEKDTSASNIRVTEEEAREQGGSCYETTCSI 166
+LQ T + + + +I+ +++ E D + +VTE + + G C + C+I
Sbjct: 90 QLQEETITEQLSKFMPRERIESLVKNCNFQEADACETAYKVTECYFQNKAGLCGSSKCNI 149
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 25.8 bits (54), Expect = 0.69
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 14 LLLGESGVGKSSIILAFTKG 33
LL+G++G GKS+I+ A T G
Sbjct: 111 LLVGKNGSGKSAILAAMTIG 130
>DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein.
Length = 353
Score = 23.0 bits (47), Expect = 4.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 6 DCVAKLKILLLGESGVGKSSII 27
D +LK+LLLG GKS+ I
Sbjct: 29 DARRELKLLLLGTGESGKSTFI 50
>X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein
Agm2 protein.
Length = 599
Score = 22.6 bits (46), Expect = 6.4
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 89 VYDVSEPKTLAKLNEWVEELQVYTTNKNIVCLVV 122
+Y + +P+T+ + +W E + Y N V+
Sbjct: 251 IYTLDQPETVDMMYQWRELMDQYKQEHNTTTKVL 284
>DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein.
Length = 353
Score = 22.6 bits (46), Expect = 6.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 9 AKLKILLLGESGVGKSSII 27
+++K+LLLG GKS+I+
Sbjct: 31 SEVKLLLLGAGESGKSTIV 49
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein
protein.
Length = 1036
Score = 22.6 bits (46), Expect = 6.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 14 LLLGESGVGKSSIILAFTKG 33
++LG +G GKS+I+ G
Sbjct: 34 IILGPNGTGKSAIVAGIVLG 53
>AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha
subunit AgOn protein.
Length = 134
Score = 22.2 bits (45), Expect = 8.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 11 LKILLLGESGVGKSSII 27
+K+LLLG GKS+I+
Sbjct: 21 IKLLLLGAGESGKSTIV 37
>AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha
subunit AgOa protein.
Length = 134
Score = 22.2 bits (45), Expect = 8.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 11 LKILLLGESGVGKSSII 27
+K+LLLG GKS+I+
Sbjct: 21 IKLLLLGAGESGKSTIV 37
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,008
Number of Sequences: 2123
Number of extensions: 6773
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 10
length of query: 167
length of database: 516,269
effective HSP length: 60
effective length of query: 107
effective length of database: 388,889
effective search space: 41611123
effective search space used: 41611123
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)
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