Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002202-TA|BGIBMGA002202-PA|IPR008906|HAT dimerisation
(474 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0523 + 3791139-3791185,3791307-3791653,3791741-3791808,379... 48 2e-05
10_08_0276 + 16431141-16431837,16432062-16432175,16432887-16433521 40 0.003
05_05_0362 + 24415257-24415481,24415585-24415835,24416659-244167... 37 0.030
06_01_0633 - 4616331-4616443,4616576-4616689,4616912-4617570,461... 36 0.053
10_01_0136 - 1639780-1639901,1640038-1640093,1641958-1642061,164... 35 0.16
07_03_0998 - 23214548-23214567,23215424-23216120 34 0.28
09_02_0396 - 8540532-8540549,8540656-8542129,8542217-8543121 33 0.37
08_02_0070 - 11897089-11898150,11898389-11898644,11898755-118990... 33 0.37
10_01_0249 - 2601376-2601547,2611800-2612464,2612549-2613055 33 0.49
09_03_0002 - 11387119-11387780,11388756-11388954,11389033-113891... 33 0.49
06_02_0147 + 12277012-12277207,12277401-12277495,12277608-122779... 33 0.49
01_02_0057 - 10691403-10691420,10691525-10692998,10693086-10693990 33 0.49
02_02_0288 - 8603033-8603436,8603611-8603862,8604530-8605022 33 0.65
12_02_0440 - 19109807-19110132,19110219-19110291,19110444-191105... 32 0.86
11_04_0445 + 17818190-17818874,17819730-17819749 32 0.86
08_01_0482 + 4236865-4236928,4237112-4237329 30 3.5
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 30 4.6
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 30 4.6
12_02_0925 - 24398851-24398998,24399478-24399718,24399886-244005... 29 8.0
07_03_1652 - 28409097-28409165,28409788-28409911,28410317-284105... 29 8.0
07_03_0014 - 12428713-12428860,12429340-12429580,12429664-124303... 29 8.0
05_02_0073 + 6336649-6336710,6336846-6336894,6338079-6338468,633... 29 8.0
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 29 8.0
04_03_0936 + 20921918-20922409,20922807-20923199 29 8.0
01_06_0352 + 28638453-28639391,28639486-28640034,28640388-286411... 29 8.0
>06_01_0523 +
3791139-3791185,3791307-3791653,3791741-3791808,
3791932-3791946
Length = 158
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 245 EVDKYFDEPLVSRRTT--DPILWWYMKRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGH 302
E+D+Y DE LV RT + + WW + +P L + + F I ++ SE FS G
Sbjct: 43 ELDRYLDEDLVDSRTKNFNVLDWWKVAGTRFPVLRRIARDIFTIHVSTVASESAFSTNGR 102
Query: 303 VVADRRNRLDGQKL 316
V+++ R+RL + L
Sbjct: 103 VLSEHRSRLTSKLL 116
>10_08_0276 + 16431141-16431837,16432062-16432175,16432887-16433521
Length = 481
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 388 IRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQE 438
+R +T GV K+RF ++ + S+EN K+ +AT V HN+ R+ N E
Sbjct: 162 LRNHIERTIGVLKKRFPILKVGTHHSIENQVKIPVATVVFHNLIRMLNGDE 212
>05_05_0362 +
24415257-24415481,24415585-24415835,24416659-24416755,
24417272-24417820,24418029-24418482,24418747-24418860,
24418940-24419023,24419499-24420067
Length = 780
Score = 37.1 bits (82), Expect = 0.030
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 388 IRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQE 438
+R +T GV K+RF ++ ++ +EN K+ +A AV HNI R N E
Sbjct: 455 LRNHVERTLGVVKKRFPILKVATFHKIENQVKIPVAAAVFHNIIRSLNGDE 505
>06_01_0633 -
4616331-4616443,4616576-4616689,4616912-4617570,
4617593-4617672
Length = 321
Score = 36.3 bits (80), Expect = 0.053
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 388 IRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQE 438
+R + GV K+RF ++ + S+EN K+ +AT V +N+ R+ N E
Sbjct: 176 LRSHIERAIGVLKKRFPILKVGTHHSIENQVKIPVATVVFYNLIRMLNGDE 226
>10_01_0136 -
1639780-1639901,1640038-1640093,1641958-1642061,
1642119-1642301,1642963-1643073,1643175-1643330,
1644627-1644866,1646496-1646603,1646764-1647903
Length = 739
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 388 IRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQE 438
+R + GV K+RF ++ + ++N K+ +AT V HN+ R+ N E
Sbjct: 289 LRNHIERAIGVLKKRFPILKVGTHHRIKNQVKIPVATVVFHNLIRMLNGDE 339
>07_03_0998 - 23214548-23214567,23215424-23216120
Length = 238
Score = 33.9 bits (74), Expect = 0.28
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 314 QKLLLTLRFYALGTMLISVADFVGVSKSTAS---VHDISGAIAILYNKYIVMHPNHVDK- 369
QK +R A GT + + GV++STA ++ + G I +Y+ PN D
Sbjct: 136 QKCTAAIRMLAYGTPADLMDETFGVAESTAMECMINFVQGVRHIFGQQYL-RKPNEQDIQ 194
Query: 370 -FFQYGQ---FPRVLGAIDCTH 387
Q G+ FP +LG++DC H
Sbjct: 195 CLLQQGEAHGFPGMLGSLDCMH 216
>09_02_0396 - 8540532-8540549,8540656-8542129,8542217-8543121
Length = 798
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 269 KRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQKLLLTLRFYALGTM 328
K RTY +Y +++ +P + ER+FS + D RN++ + L + Y +
Sbjct: 705 KNRTYHLVYRLIELSLILPVATASVERVFSAMSLIKTDLRNKMGDEWLNDLMICYTEKQI 764
Query: 329 LISVAD 334
S++D
Sbjct: 765 FRSISD 770
>08_02_0070 -
11897089-11898150,11898389-11898644,11898755-11899059,
11899149-11899550
Length = 674
Score = 33.5 bits (73), Expect = 0.37
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 261 DPILWWYMKRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLD 312
+PI WW P L +V K+ P +S+ +ERI+ + +RN+L+
Sbjct: 582 EPIEWWCSYGSETPELAEVAKRVLSQPISSSSAERIWGTYQFIHNAKRNKLN 633
>10_01_0249 - 2601376-2601547,2611800-2612464,2612549-2613055
Length = 447
Score = 33.1 bits (72), Expect = 0.49
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 388 IRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNI 430
+R +T GV K+RF ++ ++ ++N K+ +A AV HNI
Sbjct: 293 LRNHVERTLGVVKKRFPILKVATFHKIKNQVKIPVAAAVFHNI 335
>09_03_0002 -
11387119-11387780,11388756-11388954,11389033-11389106,
11389840-11390323,11390439-11390450
Length = 476
Score = 33.1 bits (72), Expect = 0.49
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 269 KRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQKL 316
K Y +Y+++K IP +T ER+FS +V RNR+ + L
Sbjct: 394 KHINYTLVYELLKLVLVIPVATTSVERVFSTMNYVKNKLRNRMGNEYL 441
>06_02_0147 +
12277012-12277207,12277401-12277495,12277608-12277949,
12278074-12278223,12278311-12278832,12279082-12279290,
12279412-12279544,12279814-12279954
Length = 595
Score = 33.1 bits (72), Expect = 0.49
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 8 EIFRRSVLASERLTATQRQLGEKPLKVKQDVITRWNSIYDMFERILEIKKSIISTIAIDY 67
+I R + L++ R ++LG + + V+Q++I ++ F +ILE+ S +IA +Y
Sbjct: 189 DIKRLAALSATRYAEACQELGLQGINVRQELIESAKTLPSTFTKILEVLNSDPVSIATEY 248
Query: 68 PST 70
+T
Sbjct: 249 YTT 251
>01_02_0057 - 10691403-10691420,10691525-10692998,10693086-10693990
Length = 798
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 269 KRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQKLLLTLRFYALGTM 328
K RTY +Y +++ +P + ER+FS + D RN++ + L + Y +
Sbjct: 705 KNRTYHLVYRLIELSLILPVATASVERVFSAMSLIKIDLRNKMGDEWLNDLMICYTEKQI 764
Query: 329 LISVAD 334
S++D
Sbjct: 765 FRSISD 770
>02_02_0288 - 8603033-8603436,8603611-8603862,8604530-8605022
Length = 382
Score = 32.7 bits (71), Expect = 0.65
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 242 AIVEVDKYFDEPLV--SRRTTDPILWWYMKRRTYPRLYDVVKKHFCIPATSTPSERIFSK 299
+I E+D Y E + + D + WW YP + +V+ IP ++ P+ ++ +K
Sbjct: 314 SITELDAYLREKTIPIKQENFDIVKWWKENCHRYPIVARMVRDFLAIPTSTRPTPQMMTK 373
>12_02_0440 -
19109807-19110132,19110219-19110291,19110444-19110586,
19110787-19111002,19111072-19111387,19111474-19111884,
19113979-19114005
Length = 503
Score = 32.3 bits (70), Expect = 0.86
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 394 KTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQE 438
+ GV K+RF ++ + +EN ++ A AV HN+ R +N E
Sbjct: 253 RAIGVLKKRFPILKVGTLHPIENQVRIPAAAAVFHNLIRRYNGNE 297
>11_04_0445 + 17818190-17818874,17819730-17819749
Length = 234
Score = 32.3 bits (70), Expect = 0.86
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 314 QKLLLTLRFYALGTMLISVADFVGVSKSTAS---VHDISGAIAILYNKYIVMHPNHVDK- 369
QK +R A GT + + GV++ST ++ + G I +Y+ PN D
Sbjct: 132 QKCTAAIRMLAYGTPADLMDETFGVAESTTMECMINFVQGVRHIFGQQYL-RKPNEQDIQ 190
Query: 370 -FFQYGQ---FPRVLGAIDCTH 387
Q G+ FP +LG++DC H
Sbjct: 191 CLLQQGEAHGFPGMLGSLDCMH 212
>08_01_0482 + 4236865-4236928,4237112-4237329
Length = 93
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 269 KRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQKL 316
K Y +Y ++K +P + ER+FS +V RNR+ Q L
Sbjct: 43 KHTAYEFVYKLLKLVLILPVATASVERVFSSMNYVKNKLRNRMGEQYL 90
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 29.9 bits (64), Expect = 4.6
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 392 SPKTFGVSKR---RFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQETPAEVQIPFQ 448
+P T V K+ R L+ ++S SL N ++L+IA H RIH L + P VQ+
Sbjct: 549 TPYTVNVPKQGRCRDLIQAISNACSLRNGERLVIAEIRNH---RIHRLLDDPV-VQLS-T 603
Query: 449 AMDDDNLQTMEVQDSKNRTELIE 471
DDD+L + + + I+
Sbjct: 604 INDDDHLAVYRLPKMEKKPNYIQ 626
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 388 IRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQETP-AEVQIP 446
+R + + F K R+ + + L+++ ++ A VLHNIC P +P
Sbjct: 762 VRRVATEAFVRLKGRWACLQKRTEVKLQDLPAVLAACCVLHNICETRGEDMDPDLRCDLP 821
Query: 447 FQAMDDDNLQTMEVQDSKNRTEL 469
+DD + +K R ++
Sbjct: 822 PDEEEDDTVLVQSESANKVRDDI 844
>12_02_0925 -
24398851-24398998,24399478-24399718,24399886-24400536,
24400625-24400828,24400902-24401583,24401678-24401934,
24402010-24402704,24403150-24403397
Length = 1041
Score = 29.1 bits (62), Expect = 8.0
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 240 AAAIVEVDKY------FDEPLVSRRTTD----PILWWYMKRRTYPRLYDVVKKHFCIPAT 289
AAA++EV+ Y F L R D P WW M P L + + +
Sbjct: 663 AAALLEVEMYRRKTGEFGRALARRMAIDGKTSPAQWWSMFASDTPNLKKLALRLVGQCCS 722
Query: 290 STPSERIFSKAGHVVADRRNRLDGQKL 316
S+ ER +S V RNRL +KL
Sbjct: 723 SSGCERNWSTFAFVHTKVRNRLTHKKL 749
>07_03_1652 -
28409097-28409165,28409788-28409911,28410317-28410557,
28410641-28411375,28411464-28411667,28411741-28412422,
28412517-28412773,28412849-28413543,28414003-28414250
Length = 1084
Score = 29.1 bits (62), Expect = 8.0
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 240 AAAIVEVDKY------FDEPLVSRRTTD----PILWWYMKRRTYPRLYDVVKKHFCIPAT 289
AAA++EV+ Y F L R D P WW M P L + + +
Sbjct: 663 AAALLEVEMYRRKTGEFGRALARRMAIDGKTSPAQWWSMFASDTPNLKKLALRLVGQCCS 722
Query: 290 STPSERIFSKAGHVVADRRNRLDGQKL 316
S+ ER +S V RNRL +KL
Sbjct: 723 SSGCERNWSTFAFVHTKVRNRLTHKKL 749
>07_03_0014 -
12428713-12428860,12429340-12429580,12429664-12430398,
12430487-12430690,12430764-12431445,12431540-12431796,
12431872-12432566,12433012-12433172,12434039-12434383,
12434399-12434631,12434656-12434740
Length = 1261
Score = 29.1 bits (62), Expect = 8.0
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 240 AAAIVEVDKY------FDEPLVSRRTTD----PILWWYMKRRTYPRLYDVVKKHFCIPAT 289
AAA++EV+ Y F L R D P WW M P L + + +
Sbjct: 855 AAALLEVEMYRRKTGEFGRALARRMAIDGKTSPAQWWSMFASDTPNLKKLALRLVGQCCS 914
Query: 290 STPSERIFSKAGHVVADRRNRLDGQKL 316
S+ ER +S V RNRL +KL
Sbjct: 915 SSGCERNWSTFAFVHTKVRNRLTHKKL 941
>05_02_0073 +
6336649-6336710,6336846-6336894,6338079-6338468,
6338677-6338902,6338983-6339270,6339594-6339967,
6340044-6340736
Length = 693
Score = 29.1 bits (62), Expect = 8.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 377 PRVLGAIDCTHIRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHN 429
P+ L + + +R + FG K RF V++ + K++IA VLHN
Sbjct: 281 PQELFNLRHSSLRTSVERAFGTLKNRFKVLASKPYFPYKVQVKIVIACCVLHN 333
>05_01_0595 +
5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 29.1 bits (62), Expect = 8.0
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 240 AAAIVEVDKY------FDEPLVSRRTTD----PILWWYMKRRTYPRLYDVVKKHFCIPAT 289
AAA++EV+ Y F L R D P WW M P L + + +
Sbjct: 784 AAALLEVEMYRRKTGEFGRALARRMAIDGKTSPAQWWSMFASDTPNLKKLALRLVGQCCS 843
Query: 290 STPSERIFSKAGHVVADRRNRLDGQKL 316
S+ ER +S V RNRL +KL
Sbjct: 844 SSGCERNWSTFAFVHTKVRNRLTHKKL 870
>04_03_0936 + 20921918-20922409,20922807-20923199
Length = 294
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 388 IRIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNICRIHNLQE 438
+R + GV K+RF ++ + ++N ++ AV HN+ R+ N E
Sbjct: 187 LRNHVERALGVLKKRFPILKVGTFHRIKNQVRIPATAAVFHNMIRLPNGDE 237
>01_06_0352 +
28638453-28639391,28639486-28640034,28640388-28641195,
28641279-28641389,28641556-28641683
Length = 844
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 362 MHPNHVDKFFQYGQFPRVLGAIDCTHIRIQSPKT 395
+HPN + F + F +GAID TH+++ PKT
Sbjct: 674 LHPNLENPDF-WPYFNDCIGAIDGTHVKLVVPKT 706
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.136 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,091,294
Number of Sequences: 37544
Number of extensions: 461079
Number of successful extensions: 1099
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1076
Number of HSP's gapped (non-prelim): 32
length of query: 474
length of database: 14,793,348
effective HSP length: 85
effective length of query: 389
effective length of database: 11,602,108
effective search space: 4513220012
effective search space used: 4513220012
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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