GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002202-TA|BGIBMGA002202-PA|IPR008906|HAT dimerisation
         (474 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.    150   7e-38
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   7.8  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score =  150 bits (364), Expect = 7e-38
 Identities = 96/315 (30%), Positives = 158/315 (50%), Gaps = 10/315 (3%)

Query: 2   KVKAIVEIFRRSVLASERLTATQRQLGEKPLKVKQDVITRWNSIYDMFERILEIKKSIIS 61
           +VK +V +F++S  AS+ L  TQ++L    LK+ Q+V TRWNS YDM  R  + K +++S
Sbjct: 289 EVKRVVMLFKKSPKASQMLADTQKKLNLDQLKMIQEVSTRWNSGYDMLNRFYKNKIALLS 348

Query: 62  TIAIDYPSTPNLAPGDLQILIKSCELFLHFKSVTEIMSGEKHVTVSQIIVLANLLKKKCE 121
             A       +L   D + + +   +  +F S T I+S +K++T+S + +L N+L  K  
Sbjct: 349 C-ADSLKMKISLESHDWEAIEQIVRVLKYFYSATNIVSAQKYITISHVGLLCNVLLTKTS 407

Query: 122 VFIQESDNIPQSVRNMAMRFLTDLTTRFRNVEDNKLLAVSTLLDPRFKTYGFPDDKTPSV 181
            F  + D I ++++N+    +  L  + +    N+ +  S +LDPR K  GF DD    V
Sbjct: 408 QFRNDED-IAENIQNLVALLIEGLQNKLKIYRSNEQILKSMILDPRIKQLGFQDD----V 462

Query: 182 DNAKKYLSNIAAKXXXXXXXXXXXXXXQNVTPETPEKPSIWDDFDLKVVDAVKKQNPTAA 241
           +  K    +I ++                V   + +   ++ D  LK   A   + P   
Sbjct: 463 EKFKNICESIISELLPLQKPAVEVEKV--VKKVSKDVDMLFGDL-LKNKGAQNYKTPRQI 519

Query: 242 AIVEVDKYFDEPLVSRRTTDPILWWYMKRRTYPRLYDVVKKHFCIPATSTPSERIFSKAG 301
           A  E+ +Y     +     DP+LWW   +  YP LY +     CIP TS P ER+FSKAG
Sbjct: 520 AENELHQYLSVENIDLEN-DPLLWWKEHQVLYPSLYTLAMSTLCIPGTSVPCERLFSKAG 578

Query: 302 HVVADRRNRLDGQKL 316
            + +++R+RL  +KL
Sbjct: 579 QIYSEKRSRLAPKKL 593


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 355 LYNKYIVMHPNHVDKFFQYGQFPRVLGAI 383
           LY   +  HPN++D + + G   R  G I
Sbjct: 518 LYKDILKEHPNYIDCYLRLGCMARDKGLI 546


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.136    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,612
Number of Sequences: 2123
Number of extensions: 16714
Number of successful extensions: 35
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 2
length of query: 474
length of database: 516,269
effective HSP length: 66
effective length of query: 408
effective length of database: 376,151
effective search space: 153469608
effective search space used: 153469608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)