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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002202-TA|BGIBMGA002202-PA|IPR008906|HAT dimerisation
         (474 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23454-7|AAC46515.1|  612|Caenorhabditis elegans Hypothetical pr...    60   4e-09
AF003139-12|AAB54166.1|   98|Caenorhabditis elegans Hypothetical...    47   3e-05
AF078781-4|AAC26918.1|  255|Caenorhabditis elegans Hypothetical ...    38   0.015
U41541-2|ABA54426.1|  526|Caenorhabditis elegans Hypothetical pr...    34   0.19 
U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical pr...    34   0.19 
AF040643-12|AAB94964.2|  658|Caenorhabditis elegans Hypothetical...    34   0.19 
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr...    32   0.77 
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr...    32   0.77 
Z50742-1|CAA90614.2|  605|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    31   1.8  
Z92797-2|CAB07236.1|  425|Caenorhabditis elegans Hypothetical pr...    30   3.1  
U50313-2|AAY86230.1|  883|Caenorhabditis elegans Inositol 1,4,5-...    30   3.1  
U50313-1|AAY86229.1|  923|Caenorhabditis elegans Inositol 1,4,5-...    30   3.1  
AC006607-5|AAF60371.2|  640|Caenorhabditis elegans Hypothetical ...    30   3.1  
U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical p...    30   4.1  
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p...    30   4.1  
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    29   7.1  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    29   7.1  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    29   7.1  
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    29   9.4  
AF026209-14|AAB71280.1|  366|Caenorhabditis elegans Hypothetical...    29   9.4  
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ...    29   9.4  
AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical...    29   9.4  

>U23454-7|AAC46515.1|  612|Caenorhabditis elegans Hypothetical
           protein C10A4.1 protein.
          Length = 612

 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 75/326 (23%), Positives = 134/326 (41%), Gaps = 24/326 (7%)

Query: 4   KAIVEIFRRSVLASERLTATQRQLGEKPLKVKQDVITRWNSIYDMFERILEIKKSIISTI 63
           K +V   ++S + +++  + Q  L    L +++    RW+ +  MF+R L I+KS I  +
Sbjct: 281 KKLVRKLKKSTVTAKQFESIQEVLELPVLCLQKSSSVRWSHMKLMFDRAL-IRKSAIEKL 339

Query: 64  AIDYPSTPNLAPGDLQILIKSCELFLHFKSVTEIMSGEKHVTVSQIIVLANLLKKKCEVF 123
                + P L   D  ++    ++F      ++  + ++    SQ+I L   L   C+  
Sbjct: 340 METNNTLPQLTENDWNVIQNVSDVFTPIDLFSK-KTQDRETPASQVIPLCYALIDHCK-- 396

Query: 124 IQESDNIPQSVRNMAMRFLTDLTTRFRNVEDNKLLAVSTLLDPRFKTYGFPDD-KTPSVD 182
             ES + P++ + +  R   +L    +     + L  +TLLDPR+K +   D+ K   ++
Sbjct: 397 --ESIDHPEAFKAIEDRMQKEL----KKYSACRYLQFATLLDPRYKDHFCTDEFKHMFIE 450

Query: 183 NAKKYLSNIAAKXXXXXXXXXXXXXXQNVTPETPEKPSIWD--DFDLKVVDAVKKQNPTA 240
             +K   N                   + + E P K + +D   F  K +    K  P  
Sbjct: 451 EFEK--CNEDDVYITSDNEVRLLDSHSDSSDEAPAKNAKFDFEKFIEKRISEQPKPIPNC 508

Query: 241 ----AAIVEVDKYFDEPLVSRRTTDPILWWYMKRRT--YPRLYDVVKKHFCIPATSTPSE 294
                A +EV +Y      S    +P  +W  +  T  YPRL     +    P+ S   E
Sbjct: 509 DNSLTARMEVQRYLS---TSVEQVNPRQFWTSRVTTSVYPRLCKFAARFIICPSGSAEVE 565

Query: 295 RIFSKAGHVVADRRNRLDGQKLLLTL 320
           R+FS AG ++   R  L  +   L L
Sbjct: 566 RVFSTAGVILNKFRKSLYSEHFKLHL 591


>AF003139-12|AAB54166.1|   98|Caenorhabditis elegans Hypothetical
           protein F53G12.11 protein.
          Length = 98

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 242 AIVEVDKYFDEPLVSRRTTDPILWWY--MKRRTYPRLYDVVKKHFCIPATSTPSERIFSK 299
           A  EV+ ++D    + R +DP ++W   + R  +P L  +  ++   PA+S  SER+FS 
Sbjct: 4   ASAEVEVFYDTD--NNRKSDPAVFWQNPLNRSKFPLLSQIANRYLTTPASSAESERVFSG 61

Query: 300 AGHVVADRRNRLDGQKL 316
           AG V    R ++  + L
Sbjct: 62  AGRVSTKLRRKMSTKSL 78


>AF078781-4|AAC26918.1|  255|Caenorhabditis elegans Hypothetical
           protein B0545.4 protein.
          Length = 255

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 14/108 (12%)

Query: 224 DFDLKVVDAVKKQNPTAAAI-------VEVDKYFDEPLVSRRTTDPILWWY--MKRRTYP 274
           DF+L + + +K +    A         +EV +Y    + S    D   +W   + + +YP
Sbjct: 112 DFELYIQEKIKSRGKHIALTDQSLTVKMEVTRYLSTAVESIFPRD---YWLNPLSKSSYP 168

Query: 275 RLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQ--KLLLTL 320
           RL    ++    P  S+  ER+FS AG ++   R  L  +  K+LLTL
Sbjct: 169 RLSQFARRFVICPTGSSEVERLFSTAGTILTKYRKTLTSENFKMLLTL 216


>U41541-2|ABA54426.1|  526|Caenorhabditis elegans Hypothetical
           protein C41A3.2b protein.
          Length = 526

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 231 DAVKKQNPTAAAIVEVDKYFDEPLVSRRTTDPILWWYMKRRTYPRLYDVVKK 282
           D  +K N     +VE DKY +  L    +TD  L W+ K     R+ D++KK
Sbjct: 4   DDDEKWNVAIKVLVEHDKYREYRLPRSLSTDRNLLWHAKHEVGKRIADIIKK 55


>U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical
           protein C41A3.2a protein.
          Length = 795

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 231 DAVKKQNPTAAAIVEVDKYFDEPLVSRRTTDPILWWYMKRRTYPRLYDVVKK 282
           D  +K N     +VE DKY +  L    +TD  L W+ K     R+ D++KK
Sbjct: 4   DDDEKWNVAIKVLVEHDKYREYRLPRSLSTDRNLLWHAKHEVGKRIADIIKK 55


>AF040643-12|AAB94964.2|  658|Caenorhabditis elegans Hypothetical
           protein F14D2.9 protein.
          Length = 658

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 389 RIQSPKTFGVSKRRFLVISLSMRLSLENIQKLIIATAVLHNI 430
           R++    FGV   +F +   ++RL  +  Q LIIA  V+HNI
Sbjct: 579 RVKVENVFGVLTSKFHIFQQNLRLEPKTSQALIIAVCVVHNI 620


>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
           protein F43G6.1b protein.
          Length = 1069

 Score = 32.3 bits (70), Expect = 0.77
 Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 18  ERLTATQRQLGEKPLKVKQDVITRWNSIYDMFERILEIKKSIISTIA--IDYPSTPNLAP 75
           ER+T+  + L  K ++ + +  T  + ++ + E +   +K IIS     +   +TP   P
Sbjct: 482 ERMTSQNKDLWLKSVQERVEEGTCLSDLHPVSEEMSNSQKIIISFSRKFLKSSNTPTFRP 541

Query: 76  GDLQILIKSCELFLHFKSVTEIMSGEKHVTVS 107
           GD+ +L     + + F  + E+   ++ V +S
Sbjct: 542 GDVCLLSNKKHIAIGFALIDEVSDDQQIVKIS 573


>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
           protein F43G6.1a protein.
          Length = 1105

 Score = 32.3 bits (70), Expect = 0.77
 Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 18  ERLTATQRQLGEKPLKVKQDVITRWNSIYDMFERILEIKKSIISTIA--IDYPSTPNLAP 75
           ER+T+  + L  K ++ + +  T  + ++ + E +   +K IIS     +   +TP   P
Sbjct: 518 ERMTSQNKDLWLKSVQERVEEGTCLSDLHPVSEEMSNSQKIIISFSRKFLKSSNTPTFRP 577

Query: 76  GDLQILIKSCELFLHFKSVTEIMSGEKHVTVS 107
           GD+ +L     + + F  + E+   ++ V +S
Sbjct: 578 GDVCLLSNKKHIAIGFALIDEVSDDQQIVKIS 609


>Z50742-1|CAA90614.2|  605|Caenorhabditis elegans Hypothetical
           protein K09A11.1 protein.
          Length = 605

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 23/174 (13%)

Query: 158 LAVSTLLDPRFKTYGFPDDKTPSVDNAKKYLSNIAAKXXXXXXXXXXXXXXQNVTPET-- 215
           L  STLLDPR+K     D  T ++         I A               + ++ E   
Sbjct: 422 LKFSTLLDPRYKDLYTNDSDTSNL---------IKAIETEFETMDYKNRTFEEISSELCG 472

Query: 216 PEKPSIWDDFDLKVVDAVKKQNPTAAAI-------VEVDKYFDEPLVSRRTTDPILWWY- 267
           P   S   DFD  + + +K +    A         +EV +Y    +      D   +W  
Sbjct: 473 PAPKSQKLDFDAYIQEKIKSRGKHNALTGEKLTVRMEVTRYLSTAVEDVTPRD---FWLN 529

Query: 268 -MKRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQKLLLTL 320
            + + +YPRL    ++    P  S+ +E++FS     + + RN L  + L + +
Sbjct: 530 DVTKASYPRLAKFARRFIICPTGSSAAEKLFSTDRATMDEYRNTLSDENLKMLI 583


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
           protein Y32H12A.8 protein.
          Length = 3901

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)

Query: 209 QNVTPETPEKPSIWDDFDLKVVDAVKKQNPTAAAIVEVDKYFDEPLVSRRTTDPILWWYM 268
           QN T +  E PSI  D D++V    K     +A  V+ ++ +D+ + +  +   I+ W +
Sbjct: 73  QNSTNDLIEGPSIVKDLDMRVYRKGKVNILYSAQNVKWNQLYDQYIATTSSNGSIVCWNI 132

Query: 269 KRR 271
            RR
Sbjct: 133 SRR 135


>Z92797-2|CAB07236.1|  425|Caenorhabditis elegans Hypothetical
           protein H25P06.4 protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 260 TDPILWWY--MKRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQK 315
           T P  +W   + +   PRL     + F  P  S   ER FS AG +++  R  L  ++
Sbjct: 313 TPPYEFWTDPLNKSACPRLAKFAAQFFICPPGSAEVERFFSGAGQILSKYRKSLSPER 370


>U50313-2|AAY86230.1|  883|Caenorhabditis elegans Inositol
           1,4,5-trisphosphate receptorinteracting protein protein
           1, isoform b protein.
          Length = 883

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 265 WWYMKRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQKLLLTLR 321
           WW      +PRLY   ++ F IPA S  +     + G ++    N  D  K  + LR
Sbjct: 655 WWARHAGRFPRLYKYARELFIIPAFSIDAAYYLGEYG-ILTHSINESDISKRKMLLR 710


>U50313-1|AAY86229.1|  923|Caenorhabditis elegans Inositol
           1,4,5-trisphosphate receptorinteracting protein protein
           1, isoform a protein.
          Length = 923

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 265 WWYMKRRTYPRLYDVVKKHFCIPATSTPSERIFSKAGHVVADRRNRLDGQKLLLTLR 321
           WW      +PRLY   ++ F IPA S  +     + G ++    N  D  K  + LR
Sbjct: 655 WWARHAGRFPRLYKYARELFIIPAFSIDAAYYLGEYG-ILTHSINESDISKRKMLLR 710


>AC006607-5|AAF60371.2|  640|Caenorhabditis elegans Hypothetical
           protein C09E7.4 protein.
          Length = 640

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 212 TPETPEKPSIWDDFDLKVVDAVKKQNPTAAAIVE--VDKYFDEPLVSRR-TTDPILWWYM 268
           T +  ++ SI  +F  K V +   + PT+    E  ++ Y   PL  R     P+ +W  
Sbjct: 521 TVDAQQEESILKNFQ-KQVKSTLYETPTSIPTPEQELNDYQSMPLCWRDFELSPLEFWSK 579

Query: 269 KRRTYPRLYDVVKKHFCIPATSTPSERIFSK 299
               +PRL  +    FC  ++ST  E   S+
Sbjct: 580 YSSRFPRLTKIASNVFCCLSSSTTCESSISE 610


>U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical
           protein F19F10.11b protein.
          Length = 868

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 15/135 (11%)

Query: 40  TRWNSIYDMFERILEIKKSIISTIAIDYPSTPNLAP------GDLQILIKSCELFLHFKS 93
           T W S  +  +R LE+    + T+ ++Y    N          DL+++ K  ++   +  
Sbjct: 451 TSWQSKMNFLKRCLELSSLFLDTVILNYEDFGNATIITSATFIDLKVIFKILQVCSKY-- 508

Query: 94  VTEIMSGEKHVTVSQIIVLANLLKKKCEVFIQESDNIPQSVRNMAMRFLTDLTTRFRNVE 153
            ++ +SG    +VSQ+I     + + C V +       + VR    +  TD    F    
Sbjct: 509 -SQELSGPDS-SVSQVIPAIRSI-RSCLVKVTVGKAFGEDVR----KCFTDTFQDFTAGP 561

Query: 154 DNKLLAVSTLLDPRF 168
            +    ++T+LDPRF
Sbjct: 562 TSMKYHIATILDPRF 576


>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
           protein F19F10.11a protein.
          Length = 1121

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 15/135 (11%)

Query: 40  TRWNSIYDMFERILEIKKSIISTIAIDYPSTPNLAP------GDLQILIKSCELFLHFKS 93
           T W S  +  +R LE+    + T+ ++Y    N          DL+++ K  ++   +  
Sbjct: 451 TSWQSKMNFLKRCLELSSLFLDTVILNYEDFGNATIITSATFIDLKVIFKILQVCSKY-- 508

Query: 94  VTEIMSGEKHVTVSQIIVLANLLKKKCEVFIQESDNIPQSVRNMAMRFLTDLTTRFRNVE 153
            ++ +SG    +VSQ+I     + + C V +       + VR    +  TD    F    
Sbjct: 509 -SQELSGPDS-SVSQVIPAIRSI-RSCLVKVTVGKAFGEDVR----KCFTDTFQDFTAGP 561

Query: 154 DNKLLAVSTLLDPRF 168
            +    ++T+LDPRF
Sbjct: 562 TSMKYHIATILDPRF 576


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 101  EKHVTVSQIIVLANLLKKKCEVFIQESDNIPQSVRNMAMRFLTDLTTRFRNVE 153
            E+   + ++I LA+ L  + E +  ESD IPQ  R  A   L +L  R  N E
Sbjct: 2068 EEWNAMQELIQLADALVDEAERY--ESDQIPQMDRKSAPNVLGELRKRVANAE 2118


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 101  EKHVTVSQIIVLANLLKKKCEVFIQESDNIPQSVRNMAMRFLTDLTTRFRNVE 153
            E+   + ++I LA+ L  + E +  ESD IPQ  R  A   L +L  R  N E
Sbjct: 2068 EEWNAMQELIQLADALVDEAERY--ESDQIPQMDRKSAPNVLGELRKRVANAE 2118


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 101  EKHVTVSQIIVLANLLKKKCEVFIQESDNIPQSVRNMAMRFLTDLTTRFRNVE 153
            E+   + ++I LA+ L  + E +  ESD IPQ  R  A   L +L  R  N E
Sbjct: 2068 EEWNAMQELIQLADALVDEAERY--ESDQIPQMDRKSAPNVLGELRKRVANAE 2118


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 210 NVTPETPEKPSIWDDFDLKVVDAVKKQNPTAAAIVEVDKYFD-EP--LVSRRTTDPILW 265
           +VTP       I+D+ DLK VD  +++N    + V+ D + + EP  +V    T P  W
Sbjct: 257 DVTPALTPPKQIFDETDLKPVDWDERENIEDESAVKPDDWDENEPQSVVDEAATKPYDW 315


>AF026209-14|AAB71280.1|  366|Caenorhabditis elegans Hypothetical
           protein C05E4.12 protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 83  KSCELFLHFKSVTEIMSGEKHVTVSQIIVLANLLKKKCEVFIQESDNIPQSVRNMAM--R 140
           KSC +FL+ + VT     +   +   I+ L   LK   ++ IQ    IP  V  M +  +
Sbjct: 115 KSCSIFLNCQRVTSNKISKLFSSSKLILKLFRFLKSVVDIKIQRLVLIPCQVNRMCLDDK 174

Query: 141 FLTDLTTR 148
            L DL  +
Sbjct: 175 ILHDLVLK 182


>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
           protein K02F6.4 protein.
          Length = 1193

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 37  DVITRWNSIYDMFERILEIKKSIISTIAIDYPSTPNLAPGD-----LQILIKSCELFLHF 91
           D+I++  ++Y   ++ L+ K++  +T +ID    PNL         LQ+L +  E+    
Sbjct: 573 DLISKLQNLYFSVKKSLDGKRTRRATGSIDPTKLPNLLASQDLGKGLQLLRQLSEVNNKK 632

Query: 92  KSVTEI--MSGEKHVTVSQII--VLANLLKKKCEVFIQESDNIPQSVRNMAMRFLTDLTT 147
           K VT++   S      V +I+  V  + LK + +  + +  N+     N   + L +L  
Sbjct: 633 KIVTDVTKFSDSVFAEVQKILKTVDTSTLKPELKKMLLDLTNLESFASNHTGQGLRELGA 692

Query: 148 RFRNVEDNKLLAV--STLLDPRFKT 170
            F    +   + V  S L DP  KT
Sbjct: 693 IFEKASEVSGVTVNSSLLEDPVAKT 717


>AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.13 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/40 (25%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 78  LQILIKSCELFLHFKSVTEIMSGEKHVTVS-QIIVLANLL 116
           + +L++   +FLH +++  ++ G KH+  S  +++ AN++
Sbjct: 135 IALLVEIQTVFLHLRTMVRLLYGSKHMPASIDVLINANMI 174


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.322    0.136    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,916,150
Number of Sequences: 27539
Number of extensions: 438538
Number of successful extensions: 1260
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1244
Number of HSP's gapped (non-prelim): 30
length of query: 474
length of database: 12,573,161
effective HSP length: 84
effective length of query: 390
effective length of database: 10,259,885
effective search space: 4001355150
effective search space used: 4001355150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)

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