GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002199-TA|BGIBMGA002199-PA|IPR000873|AMP-dependent
synthetase and ligase
         (150 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   2.6  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/28 (28%), Positives = 18/28 (64%)

Query: 107 KELQAHVASKVAVYKQIEEVAFVDAIPK 134
           KE++A +  +   Y +++E+ F+D + K
Sbjct: 326 KEMEAVLDEEPPTYAKLQELKFMDRVIK 353


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/28 (28%), Positives = 18/28 (64%)

Query: 107 KELQAHVASKVAVYKQIEEVAFVDAIPK 134
           KE++A +  +   Y +++E+ F+D + K
Sbjct: 326 KEMEAVLDEEPPTYAKLQELKFMDRVIK 353


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query: 30  KTGDLGYYKPGVGLF 44
           K  D G  KPGVG+F
Sbjct: 270 KLWDSGLRKPGVGVF 284


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.134    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,114
Number of Sequences: 317
Number of extensions: 1211
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 150
length of database: 114,650
effective HSP length: 52
effective length of query: 98
effective length of database: 98,166
effective search space:  9620268
effective search space used:  9620268
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)