Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002199-TA|BGIBMGA002199-PA|IPR000873|AMP-dependent
synthetase and ligase
(150 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023) 147 4e-36
SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) 107 5e-24
SB_30311| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 2e-20
SB_54496| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 3e-19
SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-14
SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44) 71 5e-13
SB_15902| Best HMM Match : AMOP (HMM E-Value=3.5e-13) 68 3e-12
SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0) 67 7e-12
SB_53029| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10) 64 5e-11
SB_49687| Best HMM Match : AMP-binding (HMM E-Value=7.6e-08) 64 6e-11
SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0) 62 1e-10
SB_39565| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-09
SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-09
SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-09
SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37) 58 4e-09
SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0) 58 4e-09
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 56 2e-08
SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0) 48 2e-06
SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0) 48 3e-06
SB_32820| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09) 45 3e-05
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 45 3e-05
SB_51879| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 40 0.001
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 40 0.001
SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09) 39 0.002
SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0) 38 0.003
SB_50499| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.043
SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16) 32 0.17
SB_25895| Best HMM Match : Transposase_5 (HMM E-Value=0.05) 30 0.70
SB_35540| Best HMM Match : IF3_N (HMM E-Value=4.4e-07) 30 0.93
SB_49817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 27 6.5
SB_53232| Best HMM Match : OAR (HMM E-Value=0.92) 27 6.5
SB_51039| Best HMM Match : OAR (HMM E-Value=0.92) 27 6.5
SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 27 6.5
SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 27 6.5
SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40) 27 6.5
SB_9690| Best HMM Match : PPR (HMM E-Value=7.7) 27 8.6
SB_1659| Best HMM Match : DUF1661 (HMM E-Value=4.4) 27 8.6
>SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023)
Length = 277
Score = 147 bits (356), Expect = 4e-36
Identities = 75/147 (51%), Positives = 99/147 (67%), Gaps = 2/147 (1%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAP 62
+K P +MKGY NP AT +TI +G+ TGD+GYY +I R+KELIK KG QV P
Sbjct: 119 IKGPLMMKGYLNNPEATANTIDHEGWLHTGDIGYYDDQEHFYIVGRVKELIKYKGFQVPP 178
Query: 63 AELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGH-DISEKELQAHVASKVAVYK 121
AELE LL+SHP +ADAAVIGVP E GE PKAFV+ K G + +++ V+ ++ K
Sbjct: 179 AELEDLLQSHPDIADAAVIGVPDEEAGELPKAFVVLKAGTLGTTPQDIIQFVSENISPQK 238
Query: 122 QIE-EVAFVDAIPKTASGKILRKDLKK 147
++ V VD+IPKT SGKILR+ L++
Sbjct: 239 RLRGGVEIVDSIPKTPSGKILRRQLRE 265
>SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13)
Length = 874
Score = 107 bits (256), Expect = 5e-24
Identities = 57/99 (57%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 44 FITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHD 103
+ITDR+KELIK KG QV PAELE+LL SHP V D AVIGVP GE PKAFV+RK
Sbjct: 776 YITDRLKELIKYKGFQVPPAELEALLLSHPDVEDVAVIGVPDVEAGELPKAFVVRKK-ES 834
Query: 104 ISEKELQAHVASKVAVYKQIE-EVAFVDAIPKTASGKIL 141
++ +++ V S+VA YK++ V F D IPK+ SGKIL
Sbjct: 835 LTVEDVTGFVNSRVAPYKRLRGGVEFTDEIPKSTSGKIL 873
Score = 71.7 bits (168), Expect = 2e-13
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVA 61
++ PTVMKGY KNP AT T+ +G+ TGD+G+ G +ITDR+KELIK KG QV+
Sbjct: 236 IRGPTVMKGYLKNPEATARTLDSEGWLHTGDIGHCDQGDFFYITDRLKELIKYKGFQVS 294
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 426 YITDRLKELIKYKGFQVS 443
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 451 YITDRLKELIKYKGFQVS 468
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 476 YITDRLKELIKYKGFQVS 493
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 501 YITDRLKELIKYKGFQVS 518
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 526 YITDRLKELIKYKGFQVS 543
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 551 YITDRLKELIKYKGFQVS 568
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 601 YITDRLKELIKYKGFQVS 618
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 626 YITDRLKELIKYKGFQVS 643
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELIK KG QV+
Sbjct: 676 YITDRLKELIKYKGFQVS 693
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 44 FITDRIKELIKVKGMQVA 61
++TDR+KELIK KG QV+
Sbjct: 726 YLTDRLKELIKYKGFQVS 743
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELI KG QV+
Sbjct: 576 YITDRLKELINFKGFQVS 593
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+KELI KG QV+
Sbjct: 651 YITDRLKELINFKGFQVS 668
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 44 FITDRIKELIKVKGMQVA 61
+ITDR+K LIK KG QV+
Sbjct: 701 YITDRLKVLIKYKGFQVS 718
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 47 DRIKELIKVKGMQVA 61
DR+KELIK KG QV+
Sbjct: 404 DRLKELIKYKGFQVS 418
>SB_30311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 95.1 bits (226), Expect = 2e-20
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 1 MYMKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQV 60
++++ P+V KGY P ATK++ TEDG+F TGD GV I R ++IK G ++
Sbjct: 65 LHVRGPSVFKGYWNRPEATKESFTEDGWFITGDTARLSDGVYRII-GRPWDIIKSGGYKI 123
Query: 61 APAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKELQAHVASKVAVY 120
+ E+E LR HP V D AV+G+P +GE A V + ++ ++L+A + + Y
Sbjct: 124 SALEVERELRQHPDVKDCAVLGIPDPEWGERVAAIVALNDNSALTLEDLRAWGSDHMVRY 183
Query: 121 KQIEEVAFVDAIPKTASGKILRKDLKKMY 149
+ V+ +P+ GK+ +K+L Y
Sbjct: 184 HIPAALHIVEELPRNVMGKVNKKELYSAY 212
>SB_54496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 91.5 bits (217), Expect = 3e-19
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 59 QVAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKELQAHVASKVA 118
+V PAELE+LL SHP +ADAAVIG+P + GE P+AFV+ K +ISE+E+ V VA
Sbjct: 71 RVPPAELEALLVSHPHIADAAVIGIPDDVAGELPRAFVVVK--AEISEREILDFVTEHVA 128
Query: 119 VYKQIEE-VAFVDAIPKTASGKILRKDLKK 147
K++ V FV+AIPKT +GKILR+ LKK
Sbjct: 129 PEKKLRXGVEFVEAIPKTPTGKILRRVLKK 158
>SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 75.4 bits (177), Expect = 2e-14
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 27 GYFKTGDLGYYKPGVGLF-ITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGVPH 85
GY+ TGD G + G + IT R+ +++ V G ++ AE+E + +H AVA+ AV+G PH
Sbjct: 599 GYYFTGD-GALRDKDGHYRITGRMDDVVNVSGKRLGTAEVEDAMDNHSAVAETAVVGFPH 657
Query: 86 EFYGETPKAFVIRKNGHDIS----EKELQAHVASKVAVYKQIEEVAFVDAIPKTASGKIL 141
GE A+ K+ I +E++ V K+ + E + V +PKT SGKI+
Sbjct: 658 PIKGEGIYAYATLKDDAQIEPEQFREEVKKLVRQKIGAFAVPEIIQVVPGLPKTRSGKIM 717
Query: 142 RKDLKKM 148
R+ L+K+
Sbjct: 718 RRILRKV 724
>SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44)
Length = 393
Score = 70.5 bits (165), Expect = 5e-13
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 27 GYFKTGDLGYYKPGVGLF-ITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGVPH 85
GY+ TGD G + G + +T R + + V G ++ A++ES L H AV++AAV+ PH
Sbjct: 235 GYYTTGD-GCKRDENGYYWVTGRTDDCMNVSGHLLSTAQIESALVEHDAVSEAAVVSCPH 293
Query: 86 EFYGETPKAFVIRKNGHDISEK---ELQAHVASKVAVYKQIEEVAFVDAIPKTASGKILR 142
+ GE F ++ EK EL+ V K+ + + + A+PKT SGKI+R
Sbjct: 294 KEKGEGIYCFATLMENVELDEKLIRELKQKVRLKIGPFASPDVIQSAPALPKTRSGKIMR 353
Query: 143 KDLKKM 148
+ L+++
Sbjct: 354 RVLRQV 359
>SB_15902| Best HMM Match : AMOP (HMM E-Value=3.5e-13)
Length = 609
Score = 68.1 bits (159), Expect = 3e-12
Identities = 33/79 (41%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 60 VAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKELQAHVASKVAV 119
V PAELE++L HP++ DAAVIGVP + GE P+A+V+ + ++E+++ V +VA
Sbjct: 1 VPPAELEAILVLHPSITDAAVIGVPDDEAGELPRAYVV--SDGSLTEQDVMQFVEERVAP 58
Query: 120 YKQIE-EVAFVDAIPKTAS 137
YK++ V F+D++P++ S
Sbjct: 59 YKKLRGGVEFIDSMPRSVS 77
>SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0)
Length = 445
Score = 66.9 bits (156), Expect = 7e-12
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 6 PTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPAEL 65
PT+ + + + A +T GY+ +GD G LF+ R ++I V G +++ E+
Sbjct: 331 PTIWRNHERFEAGYLNTYK--GYYVSGDGGMLDNDGYLFVLGRTDDIINVAGHRLSTGEM 388
Query: 66 ESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKELQAHVASKV 117
E ++ H AVA+ AVIG GE P V+ K+G DI E++L+ + +V
Sbjct: 389 EEVVAGHDAVAECAVIGQNSALKGEEPLGLVLLKDGVDIDEEQLKKELVQRV 440
>SB_53029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 64.9 bits (151), Expect = 3e-11
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 60 VAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKELQAHVASKVAV 119
V PAELE+LL SHP + DAAVIGVP + GE PKA V+ I+ E+Q VA +VA
Sbjct: 1 VPPAELEALLLSHPKITDAAVIGVPDDEAGELPKALVVTSGA--ITASEVQRFVAERVAS 58
Query: 120 YKQIEEVAFV 129
+K++ ++
Sbjct: 59 HKRLRGAGYL 68
>SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10)
Length = 418
Score = 64.1 bits (149), Expect = 5e-11
Identities = 35/103 (33%), Positives = 57/103 (55%)
Query: 1 MYMKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQV 60
M ++S V + Y NP +T+ + G++ TGD+ + + R K+ +K +++
Sbjct: 252 MCVRSAWVFREYLGNPESTRRAKSLTGWYHTGDICQMDKDGRIEVLGRKKDFLKRATVKI 311
Query: 61 APAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHD 103
PAELE + + HP V D AV+GVP + Y E A VI K+ +D
Sbjct: 312 FPAELERVFQEHPDVLDVAVVGVPDQRYTEELCACVILKSVND 354
>SB_49687| Best HMM Match : AMP-binding (HMM E-Value=7.6e-08)
Length = 224
Score = 63.7 bits (148), Expect = 6e-11
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQ 59
++ P V GY P T +T T DG+ +TGD+GYY +ITDR+KELIK KG Q
Sbjct: 168 LRGPIVTHGYLNKPEQTANTFTSDGWLRTGDIGYYDTEDYFYITDRLKELIKYKGHQ 224
>SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 566
Score = 62.5 bits (145), Expect = 1e-10
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAP 62
+++ V GY TK + DG+ + GDLG L + R E+IK +++ P
Sbjct: 405 VRNECVFMGYLGQEETTKKVKSPDGWIRMGDLGVMDEEGRLQVLGRKVEVIKKASVKIVP 464
Query: 63 AELESLLRSHPAVADAAVIGVPHE-FYGETPKAFVIRKNGHDISEKELQ 110
E+E+ L HP +A A VIGVP + FY E G D S K ++
Sbjct: 465 GEIEASLMQHPLLARAVVIGVPDQVFYQEICACVEFHGKGEDASTKIME 513
>SB_39565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 58.4 bits (135), Expect = 2e-09
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 4 KSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPA 63
+S V GY N AT + G+ T DLG + + R E+IK +++ P
Sbjct: 73 RSECVFLGYLGNLEATSRAKSPQGWLHTEDLGTMDDQGMIEVIGRTSEIIKRATVKIFPG 132
Query: 64 ELESLLRSHPAVADAAVIGVPHE-FYGETPKAFVIRKNGHDISEKELQAHVASKV----A 118
E+++ L +P VADA VIGVP + + E V RK+G D + A ++ A
Sbjct: 133 EIKAELLKNPLVADAIVIGVPDQRLHEEICACVVFRKSGSDGLSLDALADWCNEKWPARA 192
Query: 119 VYKQIEEVAFV--DAIPKTASGKILRKDLKKM 148
++ FV D P T S KI K++KK+
Sbjct: 193 DGLSLKPKYFVVYDEFPMTRSAKIDLKEVKKI 224
>SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAP 62
++S V Y NP ATK T G+F+ GD+G + + R K+ IK ++++
Sbjct: 374 VRSAMVFSEYVGNPEATKQAKTATGWFRLGDIGVMNESGKVKVLGRKKDFIKRATLKISS 433
Query: 63 AELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRK 99
++E ++ H V+DA V GVP + E A VI K
Sbjct: 434 LQIEKVILGHADVSDAVVFGVPDQQLHEEICACVILK 470
>SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 58.4 bits (135), Expect = 2e-09
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 4 KSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPA 63
+S V GY NP AT + G+ T DLG + +T R E+IK +++ P
Sbjct: 67 RSECVFLGYLGNPEATSRVKSPQGWLHTEDLGTMDDQDMIEVTGRKSEIIKRATVKIFPG 126
Query: 64 ELESLLRSHPAVADAAVIGVPHE-FYGETPKAFVIRKNGHD 103
E+ + L +P VAD VIGVP + + E V+RKN D
Sbjct: 127 EIRAELVKNPIVADTIVIGVPDKMLHEEICACVVLRKNACD 167
>SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37)
Length = 497
Score = 57.6 bits (133), Expect = 4e-09
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAP 62
+++ + + Y NP ATK T G+++ GD+ + + R K+ IK +++ P
Sbjct: 333 VRTAMLFQEYVGNPEATKRAKTATGWYRLGDICVMDESGKIKVLGREKDFIKRATVKIFP 392
Query: 63 AELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHD 103
AE+E ++ H VAD V+GVP + + E A VI K D
Sbjct: 393 AEIERVVLQHADVADVVVVGVPDQRFHEEICACVILKAVED 433
>SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 549
Score = 57.6 bits (133), Expect = 4e-09
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAP 62
+++ + + Y NP ATK T G+++ GD+ + + R K+ IK +++ P
Sbjct: 385 VRTAMLFQEYVGNPEATKRAKTATGWYRLGDICVMDESGKIKVLGREKDFIKRATVKIFP 444
Query: 63 AELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHD 103
AE+E ++ H VAD V+GVP + + E A VI K D
Sbjct: 445 AEIERVVLQHADVADVVVVGVPDQRFHEEICACVILKAVED 485
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 55.6 bits (128), Expect = 2e-08
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAP 62
++SP Y +P AT T G+ T DLG + I R ++ IK V P
Sbjct: 397 VRSPKAFLEYLDDPVATAGVKTSSGWVHTADLGMLDSRDRIQIFGRKRDSIKRSTRLVYP 456
Query: 63 AELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKELQA-----HVASKV 117
E+E + ++P V A G+P + E A ++ K + EL+A V+
Sbjct: 457 VEIERTMMNNPHVKQAIAFGIPDKNVNEEICACLVTKETGSLDVGELEAWCEEHFVSGPD 516
Query: 118 AVYKQIEEVAFVDAIPKTASGKILRKDLK 146
+ + + F+D P+T +GK R+ +K
Sbjct: 517 GLSLKPKYFVFMDKFPQTGNGKDDRRTVK 545
>SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 50.8 bits (116), Expect = 5e-07
Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Query: 24 TEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGV 83
T G+ +T D + + RI LIK + P E+ES+L HP V +GV
Sbjct: 421 TPTGWQRTKDHAFLTANRKFKLLGRIDNLIKCASESIQPTEVESVLTKHPNVVSVVAVGV 480
Query: 84 PHEFYGETPKAFVIRKN--GHDISEKELQ-------AHVASKVAVYKQIEEVAFVDAIPK 134
P + E A VI KN G D+ + + V + + P
Sbjct: 481 PDQRLYEVVCACVILKNLPGDDVKVTTAEIDDWCKGKFLVDSVGISAHPTYYVVFEKFPT 540
Query: 135 TASGKILRKDLKKMYA 150
T GK RK LKK+ A
Sbjct: 541 TGRGKTDRKTLKKLAA 556
>SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 569
Score = 48.4 bits (110), Expect = 2e-06
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 24 TEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGV 83
T G++ + DL + I R LIK + P E+ES+L H +A IG+
Sbjct: 420 TPTGWYPSKDLSKITNDGRVRILGRKDCLIKSATESIYPPEVESVLGKHEKIASIIAIGI 479
Query: 84 PHEFYGETPKAFVIRKNGHDISEK----ELQAHVASKVAVYK-----QIEEVAFVDAIPK 134
P + GE A VI K G K E+ A K V Q ++ ++ PK
Sbjct: 480 PDQRLGEVVCACVIIKPGFHGDNKAVIQEIDEWCAPKFYVSSNGMTPQPKKYVILENFPK 539
Query: 135 TASGKILRKDLKKM 148
T +GK+ RK LK +
Sbjct: 540 TRTGKVDRKALKNI 553
>SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 514
Score = 48.0 bits (109), Expect = 3e-06
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 16 PAAT-KDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPAELESLLRSHPA 74
PA + + IT G+F T D + I R+ ++IK V P E+E +L H A
Sbjct: 407 PATSHRSPITATGWFHTSDWAAITSEGLVRILGRMDDVIKFATDSVQPKEVEEILCEHGA 466
Query: 75 VADAAVIGVPHEFYGETPKAFVIRKNGHDISEKE 108
++D V+GVP + ET A VI SEKE
Sbjct: 467 ISDVKVVGVPDQRLFETICACVILSPRFQGSEKE 500
>SB_32820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYY 37
+K P V+ YHKNP T +T+ EDG+ TGD+G +
Sbjct: 134 IKGPNVIPRYHKNPEKTAETLDEDGWLHTGDIGMW 168
>SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09)
Length = 490
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 6 PTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPAEL 65
P V KGY +P T++ I EDG+ +GD+G + L + DR K + K+ +V A L
Sbjct: 300 PNVFKGYLHDPEKTREAIDEDGWLHSGDVGEWTENGTLKLIDRKKHIFKL-AQKVRKAIL 358
Query: 66 ESL 68
E +
Sbjct: 359 EEM 361
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 44.8 bits (101), Expect = 3e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 28 YFKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGVPHEF 87
Y+ TGD L+ R ++I G ++ P E+ES L HPAVA+AAV+ P
Sbjct: 431 YYLTGDRAVRDEDGYLWFIGRSDDVIISAGYRIGPFEVESALIEHPAVAEAAVVSSPDPV 490
Query: 88 YGE 90
GE
Sbjct: 491 RGE 493
>SB_51879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 44.0 bits (99), Expect = 5e-05
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 53 IKVKGMQVAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFV-IRKNGHDISEK---E 108
IK + P E+E++L HP V A +GVP + ET A V +R + + E E
Sbjct: 17 IKCATESIQPVEVETVLSKHPKVISAIAVGVPDQRLYETVCACVKLRLDKGETEESVVAE 76
Query: 109 LQAHVASKVAV-----YKQIEEVAFVDAIPKTASGKILRKDLKKM 148
+ A A K V Q +D P T +GK RK L+KM
Sbjct: 77 IDAWCADKFIVSTNGLSSQPVHYVVMDQFPTTRTGKTDRKTLRKM 121
>SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 43.6 bits (98), Expect = 7e-05
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 48 RIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFV-IRKNGHDISE 106
R +L + + P E+E++L HP V A +GVP + ET A V +R + + E
Sbjct: 245 RQPKLSTLNKQSIQPVEVETVLSKHPKVISAIAVGVPDQRLYETVCACVKLRLDKGETEE 304
Query: 107 K---ELQAHVASKVAV-----YKQIEEVAFVDAIPKTASGKILRKDLKKM 148
E+ A A K V Q +D P T +GK RK L+KM
Sbjct: 305 SVVAEIDAWCADKFIVSTNGLSSQPVHYVVMDQFPTTRTGKTDRKTLRKM 354
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 45 ITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDI 104
I RI LIK + P E+E++L HP V A +GVP + ET A V +
Sbjct: 574 ILGRIDNLIKCATESIQPVEVETVLSKHPKVISAIAVGVPDQRLYETVCACVKLRLDKGE 633
Query: 105 SEKELQAHV 113
+E+ + A +
Sbjct: 634 TEESVVAEI 642
Score = 33.1 bits (72), Expect = 0.099
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 60 VAPAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKELQAHVASKVAV 119
+ P E+E++L HP V A +GVP + ET A V + +E+ + A + + V +
Sbjct: 438 IQPVEVETVLSKHPKVISAIAVGVPDQRLYETVCACVKLRLDKGETEESVVAEIDACVCL 497
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 39.5 bits (88), Expect = 0.001
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 10 KGYHKNPAATKDTITEDGY----FKTGDLGYYKPGVGLFITDRIKELIKVKGMQVAPAEL 65
+GY P TK + ++TGDL + P + RI + +K++G +V +
Sbjct: 379 RGYRNLPEKTKQQFVDHQLHGRIYRTGDLVRWTPDGEIEYLGRIDDQVKIRGFRVEIGSI 438
Query: 66 ESLLRSHPAVADAAVIGV---PHEFYGETPKAFVIRKNGHDISEKELQAHVASKVAVYKQ 122
E+ L+ V AAV+ + P + V + G QA V K+A+ +
Sbjct: 439 ETHLQRQENVKMAAVVVLSPSPGQQLVVAHLTLVDKTKGFQAQ----QAVVKMKIALPEY 494
Query: 123 IEEVAFV--DAIPKTASGKILRKDLKKM 148
+ ++ + +P ASGK+ +K LK +
Sbjct: 495 MIPNGYIIHEELPTLASGKVDKKKLKTL 522
>SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09)
Length = 488
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 8 VMKGYHKNPAATKDTITEDG----YFKTGDLGYYKPGVGLFITDRIKELIKVK-GMQVAP 62
V GY+KNP T++ D +F TGD+G + L I DR K+L+K++ G V+
Sbjct: 304 VTLGYYKNPQKTQEDFEVDRNGQRWFHTGDIGEFHDDGCLKIIDRKKDLVKLQSGEYVSL 363
Query: 63 AELESLLRSHPAVADAAV 80
++E+ L V + V
Sbjct: 364 GKVEAALAQCQYVENVCV 381
>SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 561
Score = 37.9 bits (84), Expect = 0.003
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 1 MYMKSPTVMKGYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELIKVKGMQV 60
M ++S ++KG H++ A + G++ T D L I R LIK +
Sbjct: 396 MLLRSDFMIKG-HRHEAKSPT-----GWYFTHDRASLTSDGRLRIHGRQDNLIKCATESI 449
Query: 61 APAELESLLRSHPAVADAAVIGVPHEFYGETPKAFVI-----RKNGHD-ISE------KE 108
PAE+E L H + +GVP + E A V+ R + I++ +E
Sbjct: 450 QPAEVELPLHVHECIQQVIAVGVPDQRLYEVVCACVVLNPRFRADSESAIAQINQWACEE 509
Query: 109 LQAHVASKVAVYKQIEEVAFVDAIPKTASGKILRKDLKKMYA 150
L+A+ A + + + + F D PKT +GK RK++K+M A
Sbjct: 510 LRANTAG-IDLTRPRYYLVF-DEFPKTRTGKDDRKEIKRMAA 549
>SB_50499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 34.3 bits (75), Expect = 0.043
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLG 35
+K V KGY NPA T + + +D + TGD+G
Sbjct: 3 VKGRNVFKGYLHNPAMTAEVLDKDRWLYTGDIG 35
>SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16)
Length = 980
Score = 32.3 bits (70), Expect = 0.17
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 13/73 (17%)
Query: 19 TKDTITEDGYFKTGDLGYYK-------PGV---GLFITDRIKELIKVKGMQVAPAELE-S 67
T DT+T+ Y +TG LG+ K G +F+ ++E + ++GM+ P ++E +
Sbjct: 829 TGDTVTQ--YARTGYLGFIKRTDFTQTDGAMHDAMFVVGSLEETMMLRGMRYHPVDIENT 886
Query: 68 LLRSHPAVADAAV 80
++R H + ++AV
Sbjct: 887 VIRCHKHICESAV 899
>SB_25895| Best HMM Match : Transposase_5 (HMM E-Value=0.05)
Length = 590
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 103 DISEKELQAHVASKVAVYKQIE-EVAFVDAIPKTASGKILRKDLKK 147
DIS E+QA + +V VY+++E +V +++A+ ++ KK
Sbjct: 284 DISRLEVQAQMGDRVCVYEKLESKVEYLNALQTFTPASYMKSSYKK 329
>SB_35540| Best HMM Match : IF3_N (HMM E-Value=4.4e-07)
Length = 284
Score = 29.9 bits (64), Expect = 0.93
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 88 YGETPKAFVIRKNGHDISEKELQAHVASKVAVYKQIEEVAFVDAIPKTASGKILRKDLK 146
+G + K + RK H IS++E + + KV ++EV +D PK+ +LR LK
Sbjct: 211 HGFSVKLSISRKPYHKISDEE-KLEIVKKVV--DGVKEVGVLDGQPKSVGSLVLRCTLK 266
>SB_49817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 11 GYHKNPAATKDTITEDGYFKTGDLGYYKPGVGLFITDRIKELI 53
GY + + IT +G+ +TGD GY+ L + R+ +++
Sbjct: 390 GYIDDTDMSSRAITAEGWVRTGDSGYFPEYGKLKLLGRLTDVV 432
>SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 45 ITDRIKELIKVKGMQVAPAELESLL---RSHPAVADAAVIGVPHEFYGETPKAFVIRKNG 101
+TD++K+ + + A LE+L+ R+ ++ V+ P E ++ ++
Sbjct: 128 VTDKVKDKLPQTPEKKAEV-LETLINSPRTRKILSRQGVVKTPEE----EKESNTLKALA 182
Query: 102 HDISE--KELQAHVAS-KVAVYKQIEEVAFVDAIPKTASGKILRK 143
DISE K ++ ++ K A YK ++ +AF D I K+ + K L K
Sbjct: 183 SDISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 227
>SB_53232| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 806
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 45 ITDRIKELIKVKGMQVAPAELESLL---RSHPAVADAAVIGVPHEFYGETPKAFVIRKNG 101
+TD++K+ + + A LE+L+ R+ ++ V+ P E ++ ++
Sbjct: 150 VTDKVKDKLPQTPEKKAEV-LETLINSPRTRKILSRQGVVKTPEE----EKESNTLKALA 204
Query: 102 HDISE--KELQAHVAS-KVAVYKQIEEVAFVDAIPKTASGKILRK 143
DISE K ++ ++ K A YK ++ +AF D I K+ + K L K
Sbjct: 205 SDISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 249
>SB_51039| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 545
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 45 ITDRIKELIKVKGMQVAPAELESLL---RSHPAVADAAVIGVPHEFYGETPKAFVIRKNG 101
+TD++K+ + + A LE+L+ R+ ++ V+ P E ++ ++
Sbjct: 117 VTDKVKDKLPQTPEKKAEV-LEALINSPRTRKILSRQGVVKTPEE----EKESNTLKALA 171
Query: 102 HDISE--KELQAHVAS-KVAVYKQIEEVAFVDAIPKTASGKILRK 143
DISE K ++ ++ K A YK ++ +AF D I K+ + K L K
Sbjct: 172 SDISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 216
>SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 838
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 45 ITDRIKELIKVKGMQVAPAELESLL---RSHPAVADAAVIGVPHEFYGETPKAFVIRKNG 101
+TD++K+ + + A LE+L+ R+ ++ V+ P E ++ ++
Sbjct: 128 VTDKVKDKLPQTPEKKAEV-LETLINSPRTRKILSRQGVVKTPEE----EKESNTLKALA 182
Query: 102 HDISE--KELQAHVAS-KVAVYKQIEEVAFVDAIPKTASGKILRK 143
DISE K ++ ++ K A YK ++ +AF D I K+ + K L K
Sbjct: 183 SDISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 227
>SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 45 ITDRIKELIKVKGMQVAPAELESLL---RSHPAVADAAVIGVPHEFYGETPKAFVIRKNG 101
+TD++K+ + + A LE+L+ R+ ++ V+ P E ++ ++
Sbjct: 128 VTDKVKDKLPQTPEKKAEV-LETLINSPRTRKILSRQGVVKTPEE----EKESNTLKALA 182
Query: 102 HDISE--KELQAHVAS-KVAVYKQIEEVAFVDAIPKTASGKILRK 143
DISE K ++ ++ K A YK ++ +AF D I K+ + K L K
Sbjct: 183 SDISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 227
>SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 3 MKSPTVMKGYHKNPAATKDTITEDGYFKTGDLG 35
++ V KGY + T++ G+F +GD+G
Sbjct: 172 IRGRNVFKGYLHDAERTEEAFDSSGWFYSGDIG 204
>SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40)
Length = 956
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 45 ITDRIKELIKVKGMQVAPAELESLL---RSHPAVADAAVIGVPHEFYGETPKAFVIRKNG 101
+TD++K+ + + A LE+L+ R+ ++ V+ P E ++ ++
Sbjct: 814 VTDKVKDKLPQTPEKKAEV-LETLINSPRTRKILSRQGVVKTPEE----EKESNTLKALA 868
Query: 102 HDISE--KELQAHVAS-KVAVYKQIEEVAFVDAIPKTASGKILRK 143
DISE K ++ ++ K A YK ++ +AF D I K+ + K L K
Sbjct: 869 SDISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 913
>SB_9690| Best HMM Match : PPR (HMM E-Value=7.7)
Length = 258
Score = 26.6 bits (56), Expect = 8.6
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 34 LGYYKPGVGLFITDRIKELIKVKGMQVAPAELESLLRSHPAVADAAVIGVPHEFYGETPK 93
LG G L +TD + + +K K PA+L SLL + D V E GE +
Sbjct: 64 LGETSTGGVLDLTDDVMDQLKAKHPDPQPAKLGSLL--FGPIDDEVPESVYSEINGEMVR 121
Query: 94 AFVIRKNG 101
+R G
Sbjct: 122 QAALRAKG 129
>SB_1659| Best HMM Match : DUF1661 (HMM E-Value=4.4)
Length = 131
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 33 DLGYYKPGVGLFITDRIKELIKVKGMQVAPAELESLLRSHP 73
D+G L + +++IK ++ PAE+E +L HP
Sbjct: 2 DIGVITESKRLCMFGHKRDMIKRATSKIFPAEIEKILTQHP 42
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.134 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,823,299
Number of Sequences: 59808
Number of extensions: 177897
Number of successful extensions: 367
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 300
Number of HSP's gapped (non-prelim): 65
length of query: 150
length of database: 16,821,457
effective HSP length: 76
effective length of query: 74
effective length of database: 12,276,049
effective search space: 908427626
effective search space used: 908427626
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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