GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002199-TA|BGIBMGA002199-PA|IPR000873|AMP-dependent
synthetase and ligase
         (150 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   9.6  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    22   9.6  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 63  AELESLLRSHPAVADAAVIGVPHEFYGETPKAFVIRKNGHDISEKE 108
           A L   + ++  + D+  +GVP+    ETP    + ++G  + + +
Sbjct: 242 ATLGQQIPTNTTIMDSVSVGVPNIPNTETPPPGYMSEDGDPLDQND 287


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 76  ADA-AVIGVPHEFYGETPKAFVIRKNGHDI 104
           ADA AV+G  HE  GE+  A V+   G  I
Sbjct: 126 ADAGAVLGKIHEAVGESGTARVVADMGEVI 155


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,096
Number of Sequences: 2123
Number of extensions: 5396
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 150
length of database: 516,269
effective HSP length: 59
effective length of query: 91
effective length of database: 391,012
effective search space: 35582092
effective search space used: 35582092
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)