GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002198-TA|BGIBMGA002198-PA|undefined
         (110 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   0.62 
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   1.9  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   2.5  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    22   4.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           22   5.8  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    21   7.7  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 42  INTLDYYLENPESAQYYEQ 60
           +N L+ Y+E+PES Q  EQ
Sbjct: 517 LNRLNEYIEDPESPQLSEQ 535


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/17 (47%), Positives = 14/17 (82%)

Query: 74 NAPSRLESLEPDSEVEL 90
          NAPS+L +L PD++ ++
Sbjct: 72 NAPSQLPALTPDNDAKI 88


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
          protein AgamOBP38 protein.
          Length = 336

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 16 LAAVC-IAVGAAPPGHQHGYPQHAQAQINTLDYYLENPESAQYYE 59
          L A C + +GA   GH +     AQA +  L Y   + +S   Y+
Sbjct: 13 LGAQCALILGAPATGHGYDTKSFAQAYLECLRYLNISRQSLYAYD 57


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 32  HGYPQHAQAQINTLDYYLENPESAQYYEQPQQK 64
           HG P +  A   ++D  +E+    +  E+P+ +
Sbjct: 265 HGVPFYVAAPFTSIDVAIEDGSHIKIEERPEHE 297


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 22  AVGAAPPGHQHGYP-QHAQAQINTLDYYLENPESAQYYEQPQQKRGNGNINHENAPSRLE 80
           A G A P        Q  Q Q        ++ +  Q  +Q QQ+ G+   +  N  +  +
Sbjct: 396 AGGQAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQQQQQQQQQSGSATWSGSNTLNYTQ 455

Query: 81  SLEP 84
           S++P
Sbjct: 456 SIQP 459


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 49  LENPESAQYYEQPQQKRGNGNINHENAPS 77
           L +  S+Q ++QPQQ   + +    N P+
Sbjct: 442 LPSSRSSQPHQQPQQLSSSSSQGQGNQPT 470


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.130    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,540
Number of Sequences: 2123
Number of extensions: 4901
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 6
length of query: 110
length of database: 516,269
effective HSP length: 56
effective length of query: 54
effective length of database: 397,381
effective search space: 21458574
effective search space used: 21458574
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 43 (21.4 bits)