GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002197-TA|BGIBMGA002197-PA|IPR000719|Protein kinase,
IPR001054|Adenylyl cyclase class-3/4/guanylyl cyclase, IPR010916|TonB
box, N-terminal, IPR002290|Serine/threonine protein kinase,
IPR001245|Tyrosine protein kinase, IPR011009|Protein kinase-like
         (1244 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    51   4e-08
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   4.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         24   5.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   9.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   9.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   9.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   9.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 51.2 bits (117), Expect = 4e-08
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)

Query: 677 LSLLSDLVKGMRYLHGSPLRAHGRLSSRNCVVDSRWVLRVTDYGLPA-LHRTQGLPPAQR 735
           LS+   +  GM +L  + +  H  L++RN +V     ++V+D+GL   +++         
Sbjct: 595 LSIARQVALGMEHLAKTRV-VHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGG 653

Query: 736 TPRELLWTAPELIREAREGGGWLATQSGDVFSFAIIMQEVI-VRGEPYCMLSFTPEEIID 794
               + W A E +   R       T   DV+SF +++ E++ + G PY  +     E++D
Sbjct: 654 GKLPVRWMALESLTHQRY------TTYSDVWSFGVLLWEIVTLGGTPY--VGVHSSELLD 705

Query: 795 KLCRPPPLIRPSVSMGAAPPEAVSVMRQCWSEAPDLRPDFNRL 837
            L     L RP+       P+  +VM  CW E P  RP F  L
Sbjct: 706 FLKSGNRLARPA----NCSPDLYAVMLNCWKECPKNRPTFTEL 744


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 1142 PYLTSSEQSRRPVSSATSADSCSPPPEPRGSRALLPTTSVDHSA 1185
            P L S  +    +    S + C+ PPEP        TT VD  A
Sbjct: 982  PLLRSLNRGLGLIPDNPSREDCTKPPEPVTPAPPQVTTGVDTGA 1025


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 1196 NARTLKRQWSLERGDXXXXXXXXXXXXGSRVTPRHAPRYRTR 1237
            N+++L RQ+S  RG             G     R  P YR R
Sbjct: 195  NSKSLPRQYSQSRGRHNQSRSKRQPKTGREDQTRRNPYYRPR 236


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 849 KINIVDSMFEMLEKYSNNLEELIRERTEQLDME 881
           + N++ S FE  EKY  N  ++  E  E  D E
Sbjct: 122 RANLIASSFEYFEKYGFNGLDIDWEYPEAKDKE 154


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 6/21 (28%), Positives = 16/21 (76%)

Query: 269 VQNLNSPLSFYNIHRKMQIRS 289
           +Q +N  ++++ +HRK+ ++S
Sbjct: 392 LQTMNIKVNYHRVHRKIMVQS 412


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 6/21 (28%), Positives = 16/21 (76%)

Query: 269 VQNLNSPLSFYNIHRKMQIRS 289
           +Q +N  ++++ +HRK+ ++S
Sbjct: 117 LQTMNIKVNYHRVHRKIMVQS 137


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 1129 SGLSSASP---DNRPAPYLTSSEQSRRPVSSA 1157
            S  SSAS    D++P PYLT ++   R  ++A
Sbjct: 151  SAYSSASRHHVDHQPVPYLTPADDRGRVAAAA 182


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,062
Number of Sequences: 317
Number of extensions: 9819
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 7
length of query: 1244
length of database: 114,650
effective HSP length: 65
effective length of query: 1179
effective length of database: 94,045
effective search space: 110879055
effective search space used: 110879055
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)