GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002196-TA|BGIBMGA002196-PA|undefined
         (77 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6UNM6 Cluster: Putative uncharacterized protein precur...    34   0.64 
UniRef50_A5ZTW0 Cluster: Putative uncharacterized protein; n=1; ...    33   1.5  
UniRef50_Q4P6D4 Cluster: Putative uncharacterized protein; n=1; ...    32   2.6  
UniRef50_UPI0000DB7251 Cluster: PREDICTED: similar to CG32165-PA...    31   4.5  
UniRef50_Q0YPX5 Cluster: Putative uncharacterized protein; n=4; ...    31   4.5  
UniRef50_A5K328 Cluster: Putative uncharacterized protein; n=4; ...    30   7.8  

>UniRef50_A6UNM6 Cluster: Putative uncharacterized protein
           precursor; n=1; Methanococcus vannielii SB|Rep: Putative
           uncharacterized protein precursor - Methanococcus
           vannielii SB
          Length = 672

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 20  SEQPEKTTNNFKNPGILDFLHSRKRDIPNATAATV-NIERMYIETEAATEN 69
           SE+ EKT  N KN  I+   ++   ++ N  +A + N+ER++ ET   T N
Sbjct: 60  SEEAEKTIQNAKNAIIIGGPNAVSENVKNQLSAKIPNVERVFGETRVETSN 110


>UniRef50_A5ZTW0 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 580

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 22  QPEKTTNNF-KNPGILDFLHSRKRDIPNATAATVNIERMYIETEAATENHTE 72
           +PE+  N+F +NP + D+L+S  ++   A+A  ++IE   +  E   EN TE
Sbjct: 197 EPEQQENSFSRNPKVRDYLNSYNKEDLIASAIELDIEIDGLSKEELAENITE 248


>UniRef50_Q4P6D4 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 350

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 23  PEKTTNNFKNPGILDFLHSRKRDIPNATAATVNIERMY 60
           P+  T+ FKN   LDF   R R  PN  A T N+E ++
Sbjct: 121 PKNLTSCFKNAEFLDFFFKRIR--PNPEAVTANVEYLH 156


>UniRef50_UPI0000DB7251 Cluster: PREDICTED: similar to CG32165-PA;
            n=3; Endopterygota|Rep: PREDICTED: similar to CG32165-PA
            - Apis mellifera
          Length = 1114

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 3    HRELGNLLEKFLTVALSSEQPEKTTNNFKNPGILDFLHSRKRDIPN 48
            H  L + +E  L VA+S     KTT++     I++F+ S +RD PN
Sbjct: 1000 HPILRSHIEILLKVAVSVLHENKTTDDEAKGIIMEFIKSAQRDFPN 1045


>UniRef50_Q0YPX5 Cluster: Putative uncharacterized protein; n=4;
           Bacteria|Rep: Putative uncharacterized protein -
           Chlorobium ferrooxidans DSM 13031
          Length = 341

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 6   LGNLLEKFLTVALSSEQPEKTTNNFKNPGILDFL 39
           L N  E+ L+VA   +QPEK  +  K+P  L+FL
Sbjct: 153 LSNDKERVLSVARGEQQPEKAIDIIKDPMYLEFL 186


>UniRef50_A5K328 Cluster: Putative uncharacterized protein; n=4;
          Plasmodium|Rep: Putative uncharacterized protein -
          Plasmodium vivax
          Length = 620

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 7  GNLLEKFLTVALSSEQPEKTTNNFKNPGILDFLHSRKRDIPNATAATVNIERMY 60
          GN  E+  T    S +P +  NN    G  +F+ S   DI N   +TV   RMY
Sbjct: 34 GNDDEEESTATAESAEPLEGKNNKPQEGKHNFMRSIANDIINNEPSTVLFRRMY 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.314    0.128    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,675,355
Number of Sequences: 1657284
Number of extensions: 2513138
Number of successful extensions: 4638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4635
Number of HSP's gapped (non-prelim): 6
length of query: 77
length of database: 575,637,011
effective HSP length: 56
effective length of query: 21
effective length of database: 482,829,107
effective search space: 10139411247
effective search space used: 10139411247
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 65 (30.3 bits)