GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002196-TA|BGIBMGA002196-PA|undefined
         (77 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93)            27   2.8  
SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.8  
SB_51975| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   6.5  
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)                 25   8.6  

>SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93)
          Length = 1104

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 22   QPEKTTNNFKNPGILDFLHSRKRDIPNAT 50
            Q E+    F+ PG +   H  K  IPNAT
Sbjct: 1045 QLEEVKTEFRGPGGVKLSHLMKGQIPNAT 1073


>SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1203

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 16/48 (33%), Positives = 20/48 (41%)

Query: 30  FKNPGILDFLHSRKRDIPNATAATVNIERMYIETEAATENHTEIAGTC 77
           F+NP  L   H RK    +AT       R Y+ET+   EN       C
Sbjct: 310 FENPCSLGSYHPRKTHGSSATQTDYVHVRDYLETKICRENACPAGPIC 357


>SB_51975| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 809

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 3   HRELGNLLEKFLTVALSSEQPEKTTNNFKNPGILDFLHSRKRDIPNATAATV 54
           H E G L E FL VAL   QPE   N+  N  I        +D+P     T+
Sbjct: 309 HNETGILKESFLKVAL---QPE-YLNSLSNETIEILKSQTGKDVPQIVKDTL 356


>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
          Length = 839

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 9   LLEKFLTVALSSEQPEKTTNNFKNPGILDFL 39
           L  + +    S+E+PE     FK+ GI DF+
Sbjct: 190 LTNQVIDAIFSAEKPELVDVEFKSHGIKDFI 220


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.314    0.128    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,311,170
Number of Sequences: 59808
Number of extensions: 72422
Number of successful extensions: 134
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 131
Number of HSP's gapped (non-prelim): 4
length of query: 77
length of database: 16,821,457
effective HSP length: 55
effective length of query: 22
effective length of database: 13,532,017
effective search space: 297704374
effective search space used: 297704374
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 52 (25.0 bits)