GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002196-TA|BGIBMGA002196-PA|undefined
         (77 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011425-1|AAR96217.1|  340|Drosophila melanogaster AT01036p pro...    26   5.5  
AE013599-164|AAF57268.1|  340|Drosophila melanogaster CG8330-PA ...    26   5.5  
BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p pro...    26   7.3  
AY051885-1|AAK93309.1|  731|Drosophila melanogaster LD37351p pro...    26   7.3  
AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA...    26   7.3  

>BT011425-1|AAR96217.1|  340|Drosophila melanogaster AT01036p
          protein.
          Length = 340

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 32 NPGILDFLHSRKRDIPNATAATVNIERMYIETEAATENHTEIAGT 76
          NPG L+ LHSR RDI   T      E   I       NH ++  T
Sbjct: 55 NPGTLEELHSRCRDIQANT-----FEGAKIMVNKGLSNHFQVTHT 94


>AE013599-164|AAF57268.1|  340|Drosophila melanogaster CG8330-PA
          protein.
          Length = 340

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 32 NPGILDFLHSRKRDIPNATAATVNIERMYIETEAATENHTEIAGT 76
          NPG L+ LHSR RDI   T      E   I       NH ++  T
Sbjct: 55 NPGTLEELHSRCRDIQANT-----FEGAKIMVNKGLSNHFQVTHT 94


>BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p
           protein.
          Length = 1199

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 21  EQPEKTTNNFKNPGILDFLHSRKRDIPNATA 51
           +QP K T N  NP +L     R  D+  + A
Sbjct: 732 KQPRKKTTNKPNPALLQLERQRMEDMKKSDA 762


>AY051885-1|AAK93309.1|  731|Drosophila melanogaster LD37351p
           protein.
          Length = 731

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 21  EQPEKTTNNFKNPGILDFLHSRKRDIPNATA 51
           +QP K T N  NP +L     R  D+  + A
Sbjct: 264 KQPRKKTTNKPNPALLQLERQRMEDMKKSDA 294


>AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA,
           isoform A protein.
          Length = 1199

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 21  EQPEKTTNNFKNPGILDFLHSRKRDIPNATA 51
           +QP K T N  NP +L     R  D+  + A
Sbjct: 732 KQPRKKTTNKPNPALLQLERQRMEDMKKSDA 762


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.314    0.128    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,539,984
Number of Sequences: 52641
Number of extensions: 117139
Number of successful extensions: 232
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 227
Number of HSP's gapped (non-prelim): 5
length of query: 77
length of database: 24,830,863
effective HSP length: 57
effective length of query: 20
effective length of database: 21,830,326
effective search space: 436606520
effective search space used: 436606520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 53 (25.4 bits)