GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002195-TA|BGIBMGA002195-PA|IPR000182|GCN5-related
N-acetyltransferase
         (204 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001882-1|AAN71656.1|  142|Drosophila melanogaster SD13446p pro...    59   4e-09
AY119275-1|AAM51135.1|  174|Drosophila melanogaster SD26038p pro...    59   4e-09
AE014297-1956|AAN13633.1|  142|Drosophila melanogaster CG4210-PB...    59   4e-09
AE014297-1955|AAF55142.2|  174|Drosophila melanogaster CG4210-PA...    59   4e-09

>BT001882-1|AAN71656.1|  142|Drosophila melanogaster SD13446p
           protein.
          Length = 142

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 1/109 (0%)

Query: 76  FVLIAELDGQVAGYALCNRAYSSWTGRAVYVEDLWVSEXXXXXXXXXXXXXXXXXXXXXX 135
           +VL+     Q  GY++C +AYS+W GR  +VED++V                        
Sbjct: 28  YVLVDNDTDQAIGYSICYKAYSTWQGRYFFVEDIYVRPEHRKRGAGKRIFLEVASRAVEL 87

Query: 136 QVTRLDWHVLEDNAPALALYARLGARDLYRSERRLALRLDEPCILAVAA 184
           Q  RL+++VLE N PA   Y  LGA DL   E     R++E  +  +AA
Sbjct: 88  QCPRLEFNVLEWN-PARKFYESLGAVDLTDKEGWHYYRVEEQQLAKLAA 135


>AY119275-1|AAM51135.1|  174|Drosophila melanogaster SD26038p
           protein.
          Length = 174

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 1/109 (0%)

Query: 76  FVLIAELDGQVAGYALCNRAYSSWTGRAVYVEDLWVSEXXXXXXXXXXXXXXXXXXXXXX 135
           +VL+     Q  GY++C +AYS+W GR  +VED++V                        
Sbjct: 60  YVLVDNDTDQAIGYSICYKAYSTWQGRYFFVEDIYVRPEHRKRGAGKRIFLEVASRAVEL 119

Query: 136 QVTRLDWHVLEDNAPALALYARLGARDLYRSERRLALRLDEPCILAVAA 184
           Q  RL+++VLE N PA   Y  LGA DL   E     R++E  +  +AA
Sbjct: 120 QCPRLEFNVLEWN-PARKFYESLGAVDLTDKEGWHYYRVEEQQLAKLAA 167


>AE014297-1956|AAN13633.1|  142|Drosophila melanogaster CG4210-PB,
           isoform B protein.
          Length = 142

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 1/109 (0%)

Query: 76  FVLIAELDGQVAGYALCNRAYSSWTGRAVYVEDLWVSEXXXXXXXXXXXXXXXXXXXXXX 135
           +VL+     Q  GY++C +AYS+W GR  +VED++V                        
Sbjct: 28  YVLVDNDTDQAIGYSICYKAYSTWQGRYFFVEDIYVRPEHRKRGAGKRIFLEVASRAVEL 87

Query: 136 QVTRLDWHVLEDNAPALALYARLGARDLYRSERRLALRLDEPCILAVAA 184
           Q  RL+++VLE N PA   Y  LGA DL   E     R++E  +  +AA
Sbjct: 88  QCPRLEFNVLEWN-PARKFYESLGAVDLTDKEGWHYYRVEEQQLAKLAA 135


>AE014297-1955|AAF55142.2|  174|Drosophila melanogaster CG4210-PA,
           isoform A protein.
          Length = 174

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 1/109 (0%)

Query: 76  FVLIAELDGQVAGYALCNRAYSSWTGRAVYVEDLWVSEXXXXXXXXXXXXXXXXXXXXXX 135
           +VL+     Q  GY++C +AYS+W GR  +VED++V                        
Sbjct: 60  YVLVDNDTDQAIGYSICYKAYSTWQGRYFFVEDIYVRPEHRKRGAGKRIFLEVASRAVEL 119

Query: 136 QVTRLDWHVLEDNAPALALYARLGARDLYRSERRLALRLDEPCILAVAA 184
           Q  RL+++VLE N PA   Y  LGA DL   E     R++E  +  +AA
Sbjct: 120 QCPRLEFNVLEWN-PARKFYESLGAVDLTDKEGWHYYRVEEQQLAKLAA 167


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.138    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,948,687
Number of Sequences: 52641
Number of extensions: 198817
Number of successful extensions: 378
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 374
Number of HSP's gapped (non-prelim): 4
length of query: 204
length of database: 24,830,863
effective HSP length: 82
effective length of query: 122
effective length of database: 20,514,301
effective search space: 2502744722
effective search space used: 2502744722
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)